RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 SCNN1DP51172 638 aa15.88■□□□□ 0.13
COPA-205ENST00000541366 CST9Q5W186 159 aa15.88■□□□□ 0.13
COPA-205ENST00000541366 JDP2Q8WYK2 163 aa15.88■□□□□ 0.13
COPA-205ENST00000541366 GPR101Q96P66 508 aaPredicted RBP15.88■□□□□ 0.13
COPA-205ENST00000541366 KIF7Q2M1P5 1343 aa15.88■□□□□ 0.13
COPA-205ENST00000541366 ABCC12Q96J65 1359 aa15.87■□□□□ 0.13
COPA-205ENST00000541366 THSD7BQ9C0I4 1608 aa15.87■□□□□ 0.13
COPA-205ENST00000541366 SNRPA1P09661 255 aaKnown RBP15.87■□□□□ 0.13
COPA-205ENST00000541366 ALDH1B1P30837 517 aa15.87■□□□□ 0.13
COPA-205ENST00000541366 NUTM1Q86Y26 1132 aa15.87■□□□□ 0.13
COPA-205ENST00000541366 TCERG1O14776 1098 aaKnown RBP15.86■□□□□ 0.13
COPA-205ENST00000541366 GTF2E1P29083 439 aaPredicted RBP15.86■□□□□ 0.13
COPA-205ENST00000541366 PRKAR2BP31323 418 aa15.86■□□□□ 0.13
COPA-205ENST00000541366 RGS19P49795 217 aa15.86■□□□□ 0.13
COPA-205ENST00000541366 EIF6P56537 245 aaKnown RBP15.86■□□□□ 0.13
COPA-205ENST00000541366 MCM10Q7L590 875 aa15.86■□□□□ 0.13
COPA-205ENST00000541366 PSMD1Q99460 953 aa15.86■□□□□ 0.13
COPA-205ENST00000541366 BEGAINQ9BUH8 593 aa15.86■□□□□ 0.13
COPA-205ENST00000541366 LMOD1P29536 600 aaPredicted RBP15.85■□□□□ 0.13
COPA-205ENST00000541366 DCTN1Q14203 1278 aa15.85■□□□□ 0.13
COPA-205ENST00000541366 CASP8AP2Q9UKL3 1982 aa15.85■□□□□ 0.13
COPA-205ENST00000541366 TRPM7Q96QT4 1865 aa15.84■□□□□ 0.13
COPA-205ENST00000541366 ECE1P42892 770 aa15.84■□□□□ 0.13
COPA-205ENST00000541366 CRY2Q49AN0 593 aa15.84■□□□□ 0.13
COPA-205ENST00000541366 LARGE2Q8N3Y3 721 aa15.84■□□□□ 0.13
COPA-205ENST00000541366 NGEFQ8N5V2 710 aa15.84■□□□□ 0.13
COPA-205ENST00000541366 CFAP44Q96MT7 982 aa15.84■□□□□ 0.13
COPA-205ENST00000541366 RSPH6AQ9H0K4 717 aa15.84■□□□□ 0.13
COPA-205ENST00000541366 TLL2Q9Y6L7 1015 aa15.84■□□□□ 0.13
COPA-205ENST00000541366 MIS18AQ9NYP9 233 aa15.83■□□□□ 0.12
COPA-205ENST00000541366 TNRC18O15417 2968 aaPredicted RBP15.83■□□□□ 0.12
COPA-205ENST00000541366 MCOLN1Q9GZU1 580 aa15.82■□□□□ 0.12
COPA-205ENST00000541366 PCDH10Q9P2E7 1040 aa15.82■□□□□ 0.12
COPA-205ENST00000541366 CLSPNQ9HAW4 1339 aa15.82■□□□□ 0.12
COPA-205ENST00000541366 GPTP24298 496 aa15.81■□□□□ 0.12
COPA-205ENST00000541366 C3orf67Q6ZVT6 689 aa15.81■□□□□ 0.12
COPA-205ENST00000541366 USP50Q70EL3 339 aaPredicted RBP15.81■□□□□ 0.12
COPA-205ENST00000541366 CELF2O95319 508 aaKnown RBP15.8■□□□□ 0.12
COPA-205ENST00000541366 TTLL7Q6ZT98 887 aa15.8■□□□□ 0.12
COPA-205ENST00000541366 SAPCD2Q86UD0 394 aa15.8■□□□□ 0.12
COPA-205ENST00000541366 RPGRQ92834 1020 aaKnown RBP15.8■□□□□ 0.12
COPA-205ENST00000541366 GLIS2Q9BZE0 524 aaPredicted RBP15.8■□□□□ 0.12
COPA-205ENST00000541366 NUP98P52948 1817 aa15.8■□□□□ 0.12
COPA-205ENST00000541366 UBN2Q6ZU65 1347 aa15.79■□□□□ 0.12
COPA-205ENST00000541366 RGL2O15211 777 aa15.79■□□□□ 0.12
COPA-205ENST00000541366 HOXA10P31260 410 aaPredicted RBP15.79■□□□□ 0.12
COPA-205ENST00000541366 MAP2K2P36507 400 aa15.79■□□□□ 0.12
COPA-205ENST00000541366 AOC3Q16853 763 aa15.79■□□□□ 0.12
COPA-205ENST00000541366 CC2D2BQ6DHV5 1058 aa15.79■□□□□ 0.12
COPA-205ENST00000541366 NIM1KQ8IY84 436 aa15.79■□□□□ 0.12
COPA-205ENST00000541366 RTF1Q92541 710 aaKnown RBP15.79■□□□□ 0.12
COPA-205ENST00000541366 ZIC5Q96T25 663 aa15.79■□□□□ 0.12
COPA-205ENST00000541366 PDE4DIPQ5VU43 2346 aa15.78■□□□□ 0.12
COPA-205ENST00000541366 PPEF1O14829 653 aaPredicted RBP15.78■□□□□ 0.12
COPA-205ENST00000541366 PPIP5K2O43314 1243 aa15.78■□□□□ 0.12
COPA-205ENST00000541366 NYXQ9GZU5 481 aa15.78■□□□□ 0.12
COPA-205ENST00000541366 GPRC5DQ9NZD1 345 aa15.78■□□□□ 0.12
COPA-205ENST00000541366 RRP7AQ9Y3A4 280 aaKnown RBP15.78■□□□□ 0.12
COPA-205ENST00000541366 CXCL9Q07325 125 aa15.77■□□□□ 0.12
COPA-205ENST00000541366 DGKZQ13574 1117 aa15.77■□□□□ 0.12
COPA-205ENST00000541366 SUSD4Q5VX71 490 aa15.77■□□□□ 0.12
COPA-205ENST00000541366 CIAPIN1Q6FI81 312 aa15.77■□□□□ 0.12
COPA-205ENST00000541366 DLK2Q6UY11 383 aa15.77■□□□□ 0.12
COPA-205ENST00000541366 ZBTB3Q9H5J0 574 aa15.77■□□□□ 0.12
COPA-205ENST00000541366 ZNF408Q9H9D4 720 aa15.77■□□□□ 0.12
COPA-205ENST00000541366 ADARB2Q9NS39 739 aaKnown RBP15.77■□□□□ 0.12
COPA-205ENST00000541366 NPC1L1Q9UHC9 1359 aa15.76■□□□□ 0.11
COPA-205ENST00000541366 MAP3K15Q6ZN16 1313 aa15.76■□□□□ 0.11
COPA-205ENST00000541366 GMPSP49915 693 aaPredicted RBP15.76■□□□□ 0.11
COPA-205ENST00000541366 HIRAP54198 1017 aaPredicted RBP15.76■□□□□ 0.11
COPA-205ENST00000541366 RBM17Q96I25 401 aaKnown RBP15.76■□□□□ 0.11
COPA-205ENST00000541366 RIC1Q4ADV7 1423 aa15.76■□□□□ 0.11
COPA-205ENST00000541366 SHTN1A0MZ66 631 aa15.75■□□□□ 0.11
COPA-205ENST00000541366 ERVV-1B6SEH8 477 aa15.75■□□□□ 0.11
COPA-205ENST00000541366 U2AF1L5P0DN76 240 aaPredicted RBP15.75■□□□□ 0.11
COPA-205ENST00000541366 MYL6BP14649 208 aa15.75■□□□□ 0.11
COPA-205ENST00000541366 U2AF1Q01081 240 aaKnown RBP eCLIP15.75■□□□□ 0.11
COPA-205ENST00000541366 TAF7Q15545 349 aaPredicted RBP15.75■□□□□ 0.11
COPA-205ENST00000541366 CRAMP1Q96RY5 1269 aa15.75■□□□□ 0.11
COPA-205ENST00000541366 LAMB4A4D0S4 1761 aa15.75■□□□□ 0.11
COPA-205ENST00000541366 NTSR2O95665 410 aa15.74■□□□□ 0.11
COPA-205ENST00000541366 BRPF1P55201 1214 aaPredicted RBP15.74■□□□□ 0.11
COPA-205ENST00000541366 TRPM4Q8TD43 1214 aa15.74■□□□□ 0.11
COPA-205ENST00000541366 CA12O43570 354 aa15.73■□□□□ 0.11
COPA-205ENST00000541366 ZNF34Q8IZ26 560 aa15.73■□□□□ 0.11
COPA-205ENST00000541366 ZNRF3Q9ULT6 936 aa15.73■□□□□ 0.11
COPA-205ENST00000541366 RAD17O75943 681 aa15.72■□□□□ 0.11
COPA-205ENST00000541366 GRIPAP1Q4V328 841 aa15.72■□□□□ 0.11
COPA-205ENST00000541366 KIF6Q6ZMV9 814 aa15.72■□□□□ 0.11
COPA-205ENST00000541366 CFAP53Q96M91 514 aa15.72■□□□□ 0.11
COPA-205ENST00000541366 PGAP2Q9UHJ9 254 aa15.72■□□□□ 0.11
COPA-205ENST00000541366 ATP6V0A2Q9Y487 856 aa15.72■□□□□ 0.11
COPA-205ENST00000541366 HHIPL1Q96JK4 782 aa15.71■□□□□ 0.11
COPA-205ENST00000541366 BCL2L13Q9BXK5 485 aa15.71■□□□□ 0.11
COPA-205ENST00000541366 IBTKQ9P2D0 1353 aaPredicted RBP15.71■□□□□ 0.11
COPA-205ENST00000541366 ABCC4O15439 1325 aa15.7■□□□□ 0.1
COPA-205ENST00000541366 HTATSF1O43719 755 aaKnown RBP15.7■□□□□ 0.1
COPA-205ENST00000541366 EIF4A1P60842 406 aaKnown RBP15.7■□□□□ 0.1
COPA-205ENST00000541366 USP48Q86UV5 1035 aa15.7■□□□□ 0.1
COPA-205ENST00000541366 THUMPD2Q9BTF0 503 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms