RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 PPFIBP2Q8ND30 876 aa17.53■□□□□ 0.4
HMGA2-210ENST00000541363 VCX3BQ9H321 246 aa17.53■□□□□ 0.4
HMGA2-210ENST00000541363 MCM5P33992 734 aa17.53■□□□□ 0.4
HMGA2-210ENST00000541363 MAP3K12Q12852 859 aa17.53■□□□□ 0.4
HMGA2-210ENST00000541363 SEPT10Q9P0V9 454 aa17.53■□□□□ 0.4
HMGA2-210ENST00000541363 CTAGE1Q96RT6 745 aa17.53■□□□□ 0.4
HMGA2-210ENST00000541363 PHACTR2O75167 634 aa17.52■□□□□ 0.4
HMGA2-210ENST00000541363 VPS52Q8N1B4 723 aa17.52■□□□□ 0.4
HMGA2-210ENST00000541363 NACADO15069 1562 aa17.52■□□□□ 0.4
HMGA2-210ENST00000541363 IFIT1P09914 478 aaKnown RBP17.52■□□□□ 0.4
HMGA2-210ENST00000541363 ATF7IPQ6VMQ6 1270 aa17.52■□□□□ 0.4
HMGA2-210ENST00000541363 BICDL1Q6ZP65 573 aa17.52■□□□□ 0.4
HMGA2-210ENST00000541363 ZSWIM4Q9H7M6 989 aa17.52■□□□□ 0.4
HMGA2-210ENST00000541363 FAM114A2Q9NRY5 505 aa17.52■□□□□ 0.4
HMGA2-210ENST00000541363 STARD3NLO95772 234 aa17.52■□□□□ 0.4
HMGA2-210ENST00000541363 RSPH3Q86UC2 560 aa17.52■□□□□ 0.39
HMGA2-210ENST00000541363 LMBR1Q8WVP7 490 aa17.52■□□□□ 0.39
HMGA2-210ENST00000541363 FAM169AQ9Y6X4 670 aa17.52■□□□□ 0.39
HMGA2-210ENST00000541363 GOLGA8AA7E2F4 631 aa17.51■□□□□ 0.39
HMGA2-210ENST00000541363 GOLGA8BA8MQT2 603 aa17.51■□□□□ 0.39
HMGA2-210ENST00000541363 CKAP2LQ8IYA6 745 aa17.51■□□□□ 0.39
HMGA2-210ENST00000541363 ADCY5O95622 1261 aa17.51■□□□□ 0.39
HMGA2-210ENST00000541363 SAMD15Q9P1V8 674 aa17.51■□□□□ 0.39
HMGA2-210ENST00000541363 FHOD3Q2V2M9 1422 aa17.51■□□□□ 0.39
HMGA2-210ENST00000541363 IDEP14735 1019 aa17.51■□□□□ 0.39
HMGA2-210ENST00000541363 CPLX4Q7Z7G2 160 aa17.51■□□□□ 0.39
HMGA2-210ENST00000541363 ZNF530Q6P9A1 599 aaPredicted RBP17.51■□□□□ 0.39
HMGA2-210ENST00000541363 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.51■□□□□ 0.39
HMGA2-210ENST00000541363 LUC7L2Q9Y383 392 aaKnown RBP17.51■□□□□ 0.39
HMGA2-210ENST00000541363 CTAGE15A4D2H0 777 aa17.51■□□□□ 0.39
HMGA2-210ENST00000541363 CTAGE8P0CG41 777 aa17.51■□□□□ 0.39
HMGA2-210ENST00000541363 CTAGE6Q86UF2 777 aa17.51■□□□□ 0.39
HMGA2-210ENST00000541363 CTAGE4Q8IX94 777 aa17.51■□□□□ 0.39
HMGA2-210ENST00000541363 PRIMPOLQ96LW4 560 aa17.51■□□□□ 0.39
HMGA2-210ENST00000541363 PDS5BQ9NTI5 1447 aa17.51■□□□□ 0.39
HMGA2-210ENST00000541363 CTAGE9A4FU28 777 aa17.51■□□□□ 0.39
HMGA2-210ENST00000541363 PIP4K2BP78356 416 aa17.51■□□□□ 0.39
HMGA2-210ENST00000541363 CACNA2D3Q8IZS8 1091 aa17.51■□□□□ 0.39
HMGA2-210ENST00000541363 KIF1BPQ96EK5 621 aa17.51■□□□□ 0.39
HMGA2-210ENST00000541363 ABCC8Q09428 1581 aa17.5■□□□□ 0.39
HMGA2-210ENST00000541363 TRIM47Q96LD4 638 aa17.5■□□□□ 0.39
HMGA2-210ENST00000541363 CCDC114Q96M63 670 aa17.5■□□□□ 0.39
HMGA2-210ENST00000541363 NUF2Q9BZD4 464 aa17.5■□□□□ 0.39
HMGA2-210ENST00000541363 CCDC50Q8IVM0 306 aa17.5■□□□□ 0.39
HMGA2-210ENST00000541363 BACH2Q9BYV9 841 aa17.5■□□□□ 0.39
HMGA2-210ENST00000541363 TACC3Q9Y6A5 838 aa17.5■□□□□ 0.39
HMGA2-210ENST00000541363 FYCO1Q9BQS8 1478 aa17.5■□□□□ 0.39
HMGA2-210ENST00000541363 EBAG9O00559 213 aa17.5■□□□□ 0.39
HMGA2-210ENST00000541363 IFIT3O14879 490 aaKnown RBP17.5■□□□□ 0.39
HMGA2-210ENST00000541363 AKR1B10O60218 316 aa17.5■□□□□ 0.39
HMGA2-210ENST00000541363 ZPR1O75312 459 aa17.5■□□□□ 0.39
HMGA2-210ENST00000541363 GLRX3O76003 335 aaKnown RBP17.5■□□□□ 0.39
HMGA2-210ENST00000541363 UBA7P41226 1012 aa17.49■□□□□ 0.39
HMGA2-210ENST00000541363 PRPF40BQ6NWY9 871 aaKnown RBP17.49■□□□□ 0.39
HMGA2-210ENST00000541363 SPAG5Q96R06 1193 aa17.49■□□□□ 0.39
HMGA2-210ENST00000541363 USP25Q9UHP3 1055 aa17.49■□□□□ 0.39
HMGA2-210ENST00000541363 GEN1Q17RS7 908 aa17.49■□□□□ 0.39
HMGA2-210ENST00000541363 DNAJC21Q5F1R6 531 aaKnown RBP17.49■□□□□ 0.39
HMGA2-210ENST00000541363 GBP6Q6ZN66 633 aa17.49■□□□□ 0.39
HMGA2-210ENST00000541363 ZMYND15Q9H091 742 aa17.49■□□□□ 0.39
HMGA2-210ENST00000541363 IL1RAPL2Q9NP60 686 aa17.49■□□□□ 0.39
HMGA2-210ENST00000541363 STMN1P16949 149 aa17.49■□□□□ 0.39
HMGA2-210ENST00000541363 ERCC3P19447 782 aa17.49■□□□□ 0.39
HMGA2-210ENST00000541363 GBP1P32455 592 aa17.49■□□□□ 0.39
HMGA2-210ENST00000541363 MCM6Q14566 821 aa17.49■□□□□ 0.39
HMGA2-210ENST00000541363 TTF1Q15361 905 aaPredicted RBP17.49■□□□□ 0.39
HMGA2-210ENST00000541363 EEF2P13639 858 aaKnown RBP17.49■□□□□ 0.39
HMGA2-210ENST00000541363 CEP85LQ5SZL2 805 aa17.49■□□□□ 0.39
HMGA2-210ENST00000541363 TSR2Q969E8 191 aaKnown RBP17.49■□□□□ 0.39
HMGA2-210ENST00000541363 ZNF853P0CG23 659 aa17.49■□□□□ 0.39
HMGA2-210ENST00000541363 SLC5A1P13866 664 aa17.49■□□□□ 0.39
HMGA2-210ENST00000541363 TMEM110-MUSTN1A8MSY1 372 aa17.49■□□□□ 0.39
HMGA2-210ENST00000541363 ERMNQ8TAM6 284 aa17.49■□□□□ 0.39
HMGA2-210ENST00000541363 RABGAP1Q9Y3P9 1069 aa17.49■□□□□ 0.39
HMGA2-210ENST00000541363 TUBB4BP68371 445 aa17.48■□□□□ 0.39
HMGA2-210ENST00000541363 CCDC82Q8N4S0 544 aa17.48■□□□□ 0.39
HMGA2-210ENST00000541363 MRVI1Q9Y6F6 885 aa17.48■□□□□ 0.39
HMGA2-210ENST00000541363 RAD54L2Q9Y4B4 1467 aa17.48■□□□□ 0.39
HMGA2-210ENST00000541363 BIN1O00499 593 aa17.48■□□□□ 0.39
HMGA2-210ENST00000541363 MAK16Q9BXY0 300 aaKnown RBP17.48■□□□□ 0.39
HMGA2-210ENST00000541363 CAVIN2O95810 425 aa17.48■□□□□ 0.39
HMGA2-210ENST00000541363 SULT6B1Q6IMI4 303 aa17.48■□□□□ 0.39
HMGA2-210ENST00000541363 NUTM1Q86Y26 1132 aa17.48■□□□□ 0.39
HMGA2-210ENST00000541363 IMPG2Q9BZV3 1241 aa17.48■□□□□ 0.39
HMGA2-210ENST00000541363 N4BP3O15049 544 aa17.48■□□□□ 0.39
HMGA2-210ENST00000541363 CACYBPQ9HB71 228 aaKnown RBP17.48■□□□□ 0.39
HMGA2-210ENST00000541363 TRMT1LQ7Z2T5 733 aaKnown RBP17.48■□□□□ 0.39
HMGA2-210ENST00000541363 RAB3IPQ96QF0 476 aaPredicted RBP17.48■□□□□ 0.39
HMGA2-210ENST00000541363 KCNK9Q9NPC2 374 aa17.48■□□□□ 0.39
HMGA2-210ENST00000541363 INTS8Q75QN2 995 aaKnown RBP17.47■□□□□ 0.39
HMGA2-210ENST00000541363 MSANTD4Q8NCY6 345 aa17.47■□□□□ 0.39
HMGA2-210ENST00000541363 CNGA1P29973 690 aa17.47■□□□□ 0.39
HMGA2-210ENST00000541363 IFT74Q96LB3 600 aa17.47■□□□□ 0.39
HMGA2-210ENST00000541363 CAPN2P17655 700 aa17.47■□□□□ 0.39
HMGA2-210ENST00000541363 ATP5DP30049 168 aa17.47■□□□□ 0.39
HMGA2-210ENST00000541363 CCDC117Q8IWD4 279 aaPredicted RBP17.47■□□□□ 0.39
HMGA2-210ENST00000541363 LMNTD2Q8IXW0 634 aa17.47■□□□□ 0.39
HMGA2-210ENST00000541363 WHAMMQ8TF30 809 aa17.46■□□□□ 0.39
HMGA2-210ENST00000541363 UBASH3AP57075 661 aa17.46■□□□□ 0.39
HMGA2-210ENST00000541363 NCBP1Q09161 790 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms