RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 BCL9O00512 1426 aa20.83■□□□□ 0.92
SPIDR-227ENST00000541342 ERC2O15083 957 aa20.83■□□□□ 0.92
SPIDR-227ENST00000541342 ST18O60284 1047 aa20.83■□□□□ 0.92
SPIDR-227ENST00000541342 EPHA10Q5JZY3 1008 aa20.83■□□□□ 0.92
SPIDR-227ENST00000541342 JARID2Q92833 1246 aaPredicted RBP20.83■□□□□ 0.92
SPIDR-227ENST00000541342 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.82■□□□□ 0.92
SPIDR-227ENST00000541342 REC8O95072 547 aa20.82■□□□□ 0.92
SPIDR-227ENST00000541342 CASC1Q6TDU7 716 aa20.82■□□□□ 0.92
SPIDR-227ENST00000541342 DOT1LQ8TEK3 1739 aa20.82■□□□□ 0.92
SPIDR-227ENST00000541342 NWD2Q9ULI1 1742 aa20.82■□□□□ 0.92
SPIDR-227ENST00000541342 SLIT2O94813 1529 aa20.8■□□□□ 0.92
SPIDR-227ENST00000541342 HSP90AB4PQ58FF6 505 aa20.8■□□□□ 0.92
SPIDR-227ENST00000541342 RBSNQ9H1K0 784 aa20.8■□□□□ 0.92
SPIDR-227ENST00000541342 TJP1Q07157 1748 aa20.8■□□□□ 0.92
SPIDR-227ENST00000541342 DNAJC10Q8IXB1 793 aa20.8■□□□□ 0.92
SPIDR-227ENST00000541342 RBM27Q9P2N5 1060 aaKnown RBP20.8■□□□□ 0.92
SPIDR-227ENST00000541342 PRPF40AO75400 957 aaKnown RBP20.79■□□□□ 0.92
SPIDR-227ENST00000541342 UBE3BQ7Z3V4 1068 aa20.79■□□□□ 0.92
SPIDR-227ENST00000541342 VSIG10Q8N0Z9 540 aa20.79■□□□□ 0.92
SPIDR-227ENST00000541342 AOX1Q06278 1338 aa20.79■□□□□ 0.92
SPIDR-227ENST00000541342 UBAP1LF5GYI3 381 aa20.78■□□□□ 0.92
SPIDR-227ENST00000541342 NCLP19338 710 aaKnown RBP20.78■□□□□ 0.92
SPIDR-227ENST00000541342 PRIM1P49642 420 aaKnown RBP20.78■□□□□ 0.92
SPIDR-227ENST00000541342 CASP7P55210 303 aa20.78■□□□□ 0.92
SPIDR-227ENST00000541342 OS9Q13438 667 aaPredicted RBP20.78■□□□□ 0.92
SPIDR-227ENST00000541342 SLC4A9Q96Q91 983 aa20.78■□□□□ 0.92
SPIDR-227ENST00000541342 NSFL1CQ9UNZ2 370 aaKnown RBP20.78■□□□□ 0.92
SPIDR-227ENST00000541342 THRAP3Q9Y2W1 955 aaKnown RBP20.78■□□□□ 0.92
SPIDR-227ENST00000541342 UNC5CLQ8IV45 518 aa20.78■□□□□ 0.92
SPIDR-227ENST00000541342 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.78■□□□□ 0.92
SPIDR-227ENST00000541342 SPATA31A5Q5VU36 1347 aa20.78■□□□□ 0.92
SPIDR-227ENST00000541342 SPATA31A7Q8IWB4 1347 aa20.78■□□□□ 0.92
SPIDR-227ENST00000541342 ZSCAN30Q86W11 494 aa20.78■□□□□ 0.92
SPIDR-227ENST00000541342 PI4K2BQ8TCG2 481 aa20.78■□□□□ 0.92
SPIDR-227ENST00000541342 ZBTB3Q9H5J0 574 aa20.78■□□□□ 0.92
SPIDR-227ENST00000541342 A0A087WZG4 1122 aa20.77■□□□□ 0.92
SPIDR-227ENST00000541342 KLHDC4Q8TBB5 520 aa20.76■□□□□ 0.91
SPIDR-227ENST00000541342 SYTL4Q96C24 671 aaPredicted RBP20.76■□□□□ 0.91
SPIDR-227ENST00000541342 CDCA7Q9BWT1 371 aaPredicted RBP20.76■□□□□ 0.91
SPIDR-227ENST00000541342 COL15A1P39059 1388 aa20.76■□□□□ 0.91
SPIDR-227ENST00000541342 TMX3Q96JJ7 454 aa20.76■□□□□ 0.91
SPIDR-227ENST00000541342 PALD1Q9ULE6 856 aa20.76■□□□□ 0.91
SPIDR-227ENST00000541342 TMEM63CQ9P1W3 806 aa20.76■□□□□ 0.91
SPIDR-227ENST00000541342 SASH1O94885 1247 aa20.75■□□□□ 0.91
SPIDR-227ENST00000541342 DDB1Q16531 1140 aa20.75■□□□□ 0.91
SPIDR-227ENST00000541342 PDLIM2Q96JY6 352 aa20.75■□□□□ 0.91
SPIDR-227ENST00000541342 TEX13AQ9BXU3 409 aaPredicted RBP20.75■□□□□ 0.91
SPIDR-227ENST00000541342 TRIM6-TRIM34B2RNG4 842 aa20.75■□□□□ 0.91
SPIDR-227ENST00000541342 NEK4P51957 841 aa20.75■□□□□ 0.91
SPIDR-227ENST00000541342 RILPL2Q969X0 211 aa20.75■□□□□ 0.91
SPIDR-227ENST00000541342 ESYT1Q9BSJ8 1104 aa20.75■□□□□ 0.91
SPIDR-227ENST00000541342 RABL6Q3YEC7 729 aaPredicted RBP20.74■□□□□ 0.91
SPIDR-227ENST00000541342 USP42Q9H9J4 1324 aaKnown RBP20.74■□□□□ 0.91
SPIDR-227ENST00000541342 ERC1Q8IUD2 1116 aa20.74■□□□□ 0.91
SPIDR-227ENST00000541342 SIL1Q9H173 461 aa20.74■□□□□ 0.91
SPIDR-227ENST00000541342 H7C1W4 665 aa20.73■□□□□ 0.91
SPIDR-227ENST00000541342 RFX5P48382 616 aaPredicted RBP20.73■□□□□ 0.91
SPIDR-227ENST00000541342 MARCH10Q8NA82 808 aaPredicted RBP20.73■□□□□ 0.91
SPIDR-227ENST00000541342 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.73■□□□□ 0.91
SPIDR-227ENST00000541342 CLASRPQ8N2M8 674 aaKnown RBP20.73■□□□□ 0.91
SPIDR-227ENST00000541342 CWC25Q9NXE8 425 aaPredicted RBP20.73■□□□□ 0.91
SPIDR-227ENST00000541342 MAP4K4O95819 1239 aaPredicted RBP20.72■□□□□ 0.91
SPIDR-227ENST00000541342 FOXD4L5Q5VV16 416 aaPredicted RBP20.72■□□□□ 0.91
SPIDR-227ENST00000541342 FOXD4L4Q8WXT5 416 aaPredicted RBP20.72■□□□□ 0.91
SPIDR-227ENST00000541342 ZNF330Q9Y3S2 320 aaPredicted RBP20.72■□□□□ 0.91
SPIDR-227ENST00000541342 STARD3NLO95772 234 aa20.72■□□□□ 0.91
SPIDR-227ENST00000541342 G3BP1Q13283 466 aaKnown RBP eCLIP20.72■□□□□ 0.91
SPIDR-227ENST00000541342 CYP19A1P11511 503 aaPredicted RBP20.71■□□□□ 0.91
SPIDR-227ENST00000541342 CHMLP26374 656 aa20.71■□□□□ 0.91
SPIDR-227ENST00000541342 CCDC9Q9Y3X0 531 aaKnown RBP20.71■□□□□ 0.91
SPIDR-227ENST00000541342 CUL4AQ13619 759 aa20.71■□□□□ 0.91
SPIDR-227ENST00000541342 BARGINQ6ZT62 677 aa20.71■□□□□ 0.91
SPIDR-227ENST00000541342 ANP32BQ92688 251 aaKnown RBP20.71■□□□□ 0.91
SPIDR-227ENST00000541342 FOXO4P98177 505 aa20.71■□□□□ 0.91
SPIDR-227ENST00000541342 BRD1O95696 1058 aa20.7■□□□□ 0.9
SPIDR-227ENST00000541342 IL25Q9H293 177 aa20.7■□□□□ 0.9
SPIDR-227ENST00000541342 PTPN12Q05209 780 aaKnown RBP20.7■□□□□ 0.9
SPIDR-227ENST00000541342 CCDC191Q8NCU4 936 aa20.7■□□□□ 0.9
SPIDR-227ENST00000541342 TTC41PQ6P2S7 1318 aa20.7■□□□□ 0.9
SPIDR-227ENST00000541342 RRP9O43818 475 aaKnown RBP20.7■□□□□ 0.9
SPIDR-227ENST00000541342 EAF2Q96CJ1 260 aaPredicted RBP20.7■□□□□ 0.9
SPIDR-227ENST00000541342 ACSBG1Q96GR2 724 aa20.7■□□□□ 0.9
SPIDR-227ENST00000541342 COPRSQ9NQ92 184 aa20.7■□□□□ 0.9
SPIDR-227ENST00000541342 AACSQ86V21 672 aa20.69■□□□□ 0.9
SPIDR-227ENST00000541342 ISCA1Q9BUE6 129 aa20.69■□□□□ 0.9
SPIDR-227ENST00000541342 BCL9LQ86UU0 1499 aa20.69■□□□□ 0.9
SPIDR-227ENST00000541342 SYCE3A1L190 88 aa20.69■□□□□ 0.9
SPIDR-227ENST00000541342 HSP90AA2PQ14568 343 aaPredicted RBP20.69■□□□□ 0.9
SPIDR-227ENST00000541342 LRSAM1Q6UWE0 723 aa20.69■□□□□ 0.9
SPIDR-227ENST00000541342 KIAA1211Q6ZU35 1233 aa20.69■□□□□ 0.9
SPIDR-227ENST00000541342 OFD1O75665 1012 aa20.68■□□□□ 0.9
SPIDR-227ENST00000541342 HS1BP3Q53T59 392 aa20.68■□□□□ 0.9
SPIDR-227ENST00000541342 LMBR1LQ6UX01 489 aa20.68■□□□□ 0.9
SPIDR-227ENST00000541342 IL17RAQ96F46 866 aa20.68■□□□□ 0.9
SPIDR-227ENST00000541342 JCADQ9P266 1359 aa20.68■□□□□ 0.9
SPIDR-227ENST00000541342 IFIT2P09913 472 aaKnown RBP20.68■□□□□ 0.9
SPIDR-227ENST00000541342 TCIRG1Q13488 830 aa20.68■□□□□ 0.9
SPIDR-227ENST00000541342 C8orf37Q96NL8 207 aa20.68■□□□□ 0.9
SPIDR-227ENST00000541342 TLR7Q9NYK1 1049 aaKnown RBP20.67■□□□□ 0.9
SPIDR-227ENST00000541342 NOL7Q9UMY1 257 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms