RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 SNRPNP63162 240 aaKnown RBP9.5□□□□□ -0.89
SUDS3-202ENST00000541280 ZNF468Q5VIY5 522 aaPredicted RBP9.5□□□□□ -0.89
SUDS3-202ENST00000541280 RHPN1Q8TCX5 695 aa9.5□□□□□ -0.89
SUDS3-202ENST00000541280 C2orf49Q9BVC5 232 aaPredicted RBP9.5□□□□□ -0.89
SUDS3-202ENST00000541280 PBRM1Q86U86 1689 aa9.49□□□□□ -0.89
SUDS3-202ENST00000541280 USP17L15C9J2P7 530 aa9.49□□□□□ -0.89
SUDS3-202ENST00000541280 USP17L10C9JJH3 530 aa9.49□□□□□ -0.89
SUDS3-202ENST00000541280 USP17L13C9JLJ4 530 aa9.49□□□□□ -0.89
SUDS3-202ENST00000541280 USP17L12C9JPN9 530 aa9.49□□□□□ -0.89
SUDS3-202ENST00000541280 USP17L11C9JVI0 530 aa9.49□□□□□ -0.89
SUDS3-202ENST00000541280 USP17L21D6R901 530 aa9.49□□□□□ -0.89
SUDS3-202ENST00000541280 USP17L18D6R9N7 530 aa9.49□□□□□ -0.89
SUDS3-202ENST00000541280 USP17L22D6RA61 530 aa9.49□□□□□ -0.89
SUDS3-202ENST00000541280 USP17L17D6RBQ6 530 aa9.49□□□□□ -0.89
SUDS3-202ENST00000541280 USP17L19D6RCP7 530 aa9.49□□□□□ -0.89
SUDS3-202ENST00000541280 USP17L20D6RJB6 530 aa9.49□□□□□ -0.89
SUDS3-202ENST00000541280 USP17L24Q0WX57 530 aa9.49□□□□□ -0.89
SUDS3-202ENST00000541280 CFAP70Q5T0N1 1121 aa9.49□□□□□ -0.89
SUDS3-202ENST00000541280 LRRC69Q6ZNQ3 347 aa9.49□□□□□ -0.89
SUDS3-202ENST00000541280 PHACTR1Q9C0D0 580 aa9.49□□□□□ -0.89
SUDS3-202ENST00000541280 MKL2Q9ULH7 1088 aa9.49□□□□□ -0.89
SUDS3-202ENST00000541280 NEURL1BA8MQ27 555 aa9.48□□□□□ -0.89
SUDS3-202ENST00000541280 PPP1R12BO60237 982 aaPredicted RBP9.48□□□□□ -0.89
SUDS3-202ENST00000541280 IGHA1P01876 353 aa9.48□□□□□ -0.89
SUDS3-202ENST00000541280 FCHSD1Q86WN1 690 aa9.48□□□□□ -0.89
SUDS3-202ENST00000541280 FAM9AQ8IZU1 332 aaPredicted RBP9.48□□□□□ -0.89
SUDS3-202ENST00000541280 BTBD6Q96KE9 485 aa9.48□□□□□ -0.89
SUDS3-202ENST00000541280 VRTNQ9H8Y1 702 aa9.48□□□□□ -0.89
SUDS3-202ENST00000541280 ATAD2Q6PL18 1390 aa9.48□□□□□ -0.89
SUDS3-202ENST00000541280 LMOD1P29536 600 aaPredicted RBP9.47□□□□□ -0.89
SUDS3-202ENST00000541280 LINC00114Q6XXX2 140 aa9.47□□□□□ -0.89
SUDS3-202ENST00000541280 ALYREFQ86V81 257 aaKnown RBP9.47□□□□□ -0.89
SUDS3-202ENST00000541280 ANKMY2Q8IV38 441 aa9.47□□□□□ -0.89
SUDS3-202ENST00000541280 DCAF5Q96JK2 942 aa9.47□□□□□ -0.89
SUDS3-202ENST00000541280 ARXQ96QS3 562 aa9.47□□□□□ -0.89
SUDS3-202ENST00000541280 MDFIQ99750 246 aa9.47□□□□□ -0.89
SUDS3-202ENST00000541280 ANKIB1Q9P2G1 1089 aa9.47□□□□□ -0.89
SUDS3-202ENST00000541280 CEP170Q5SW79 1584 aa9.46□□□□□ -0.89
SUDS3-202ENST00000541280 KCNQ4P56696 695 aa9.46□□□□□ -0.9
SUDS3-202ENST00000541280 DPYDQ12882 1025 aa9.46□□□□□ -0.9
SUDS3-202ENST00000541280 NEUROD4Q9HD90 331 aa9.46□□□□□ -0.9
SUDS3-202ENST00000541280 HCN4Q9Y3Q4 1203 aa9.46□□□□□ -0.9
SUDS3-202ENST00000541280 CARMIL2Q6F5E8 1435 aa9.46□□□□□ -0.9
SUDS3-202ENST00000541280 RAPGEF2Q9Y4G8 1499 aa9.46□□□□□ -0.9
SUDS3-202ENST00000541280 IGFBP4P22692 258 aa9.45□□□□□ -0.9
SUDS3-202ENST00000541280 DGKGP49619 791 aa9.45□□□□□ -0.9
SUDS3-202ENST00000541280 ALDH16A1Q8IZ83 802 aa9.45□□□□□ -0.9
SUDS3-202ENST00000541280 SCG3Q8WXD2 468 aaKnown RBP9.45□□□□□ -0.9
SUDS3-202ENST00000541280 SUSD3Q96L08 255 aa9.45□□□□□ -0.9
SUDS3-202ENST00000541280 ZNF777Q9ULD5 760 aaPredicted RBP9.45□□□□□ -0.9
SUDS3-202ENST00000541280 TYRO3Q06418 890 aa9.44□□□□□ -0.9
SUDS3-202ENST00000541280 HIF1AQ16665 826 aa9.44□□□□□ -0.9
SUDS3-202ENST00000541280 PRR12Q9ULL5 1215 aa9.44□□□□□ -0.9
SUDS3-202ENST00000541280 CUL7Q14999 1698 aa9.43□□□□□ -0.9
SUDS3-202ENST00000541280 PTPRGP23470 1445 aa9.43□□□□□ -0.9
SUDS3-202ENST00000541280 PIK3R2O00459 728 aa9.43□□□□□ -0.9
SUDS3-202ENST00000541280 SIN3BO75182 1162 aa9.43□□□□□ -0.9
SUDS3-202ENST00000541280 AMPD1P23109 780 aa9.43□□□□□ -0.9
SUDS3-202ENST00000541280 CHSY3Q70JA7 882 aa9.43□□□□□ -0.9
SUDS3-202ENST00000541280 HSH2DQ96JZ2 352 aa9.43□□□□□ -0.9
SUDS3-202ENST00000541280 EEA1Q15075 1411 aa9.42□□□□□ -0.9
SUDS3-202ENST00000541280 TNIKQ9UKE5 1360 aa9.42□□□□□ -0.9
SUDS3-202ENST00000541280 ITGB2P05107 769 aa9.42□□□□□ -0.9
SUDS3-202ENST00000541280 PCBP4P57723 403 aaKnown RBP9.42□□□□□ -0.9
SUDS3-202ENST00000541280 SFSWAPQ12872 951 aaKnown RBP9.42□□□□□ -0.9
SUDS3-202ENST00000541280 PLA2G4EQ3MJ16 856 aa9.42□□□□□ -0.9
SUDS3-202ENST00000541280 ZNF280CQ8ND82 737 aa9.42□□□□□ -0.9
SUDS3-202ENST00000541280 RRAGCQ9HB90 399 aa9.42□□□□□ -0.9
SUDS3-202ENST00000541280 BRD7Q9NPI1 651 aa9.42□□□□□ -0.9
SUDS3-202ENST00000541280 ELOA3CA0A087WX78 387 aaPredicted RBP9.41□□□□□ -0.9
SUDS3-202ENST00000541280 ELOA3DA6NLF2 546 aaPredicted RBP9.41□□□□□ -0.9
SUDS3-202ENST00000541280 ADARB2-AS1A8MUL3 147 aa9.41□□□□□ -0.9
SUDS3-202ENST00000541280 GNB5O14775 395 aa9.41□□□□□ -0.9
SUDS3-202ENST00000541280 RTN1Q16799 776 aa9.41□□□□□ -0.9
SUDS3-202ENST00000541280 ELOA3BQ3SY89 546 aa9.41□□□□□ -0.9
SUDS3-202ENST00000541280 IER5Q5VY09 327 aa9.41□□□□□ -0.9
SUDS3-202ENST00000541280 SYT9Q86SS6 491 aa9.41□□□□□ -0.9
SUDS3-202ENST00000541280 ELOA3Q8NG57 546 aa9.41□□□□□ -0.9
SUDS3-202ENST00000541280 TNFRSF25Q93038 417 aa9.41□□□□□ -0.9
SUDS3-202ENST00000541280 HINFPQ9BQA5 517 aa9.41□□□□□ -0.9
SUDS3-202ENST00000541280 COL8A1P27658 744 aa9.4□□□□□ -0.9
SUDS3-202ENST00000541280 WEE1P30291 646 aa9.4□□□□□ -0.9
SUDS3-202ENST00000541280 GRIN2CQ14957 1233 aa9.4□□□□□ -0.9
SUDS3-202ENST00000541280 GPAT2Q6NUI2 795 aa9.4□□□□□ -0.9
SUDS3-202ENST00000541280 CEP63Q96MT8 703 aa9.4□□□□□ -0.9
SUDS3-202ENST00000541280 SLC30A3Q99726 388 aa9.4□□□□□ -0.9
SUDS3-202ENST00000541280 SHROOM2Q13796 1616 aa9.4□□□□□ -0.9
SUDS3-202ENST00000541280 FOXO3O43524 673 aa9.39□□□□□ -0.91
SUDS3-202ENST00000541280 RUSC2Q8N2Y8 1516 aa9.39□□□□□ -0.91
SUDS3-202ENST00000541280 PRXQ9BXM0 1461 aa9.39□□□□□ -0.91
SUDS3-202ENST00000541280 SPEM2Q0P670 501 aa9.38□□□□□ -0.91
SUDS3-202ENST00000541280 BTLAQ7Z6A9 289 aa9.38□□□□□ -0.91
SUDS3-202ENST00000541280 KCNH4Q9UQ05 1017 aa9.38□□□□□ -0.91
SUDS3-202ENST00000541280 ELOAQ14241 798 aaKnown RBP9.37□□□□□ -0.91
SUDS3-202ENST00000541280 SUV39H2Q9H5I1 410 aa9.37□□□□□ -0.91
SUDS3-202ENST00000541280 EFCC1Q9HA90 598 aa9.37□□□□□ -0.91
SUDS3-202ENST00000541280 NOP53Q9NZM5 478 aaKnown RBP9.37□□□□□ -0.91
SUDS3-202ENST00000541280 DMGDHQ9UI17 866 aaKnown RBP9.37□□□□□ -0.91
SUDS3-202ENST00000541280 ERCC6L2Q5T890 1561 aa9.37□□□□□ -0.91
SUDS3-202ENST00000541280 KRBA1A5PL33 1030 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms