RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 FAM157BP0CG42 384 aa10.3□□□□□ -0.76
TTR-203ENST00000541025 LAMC2Q13753 1193 aa10.3□□□□□ -0.76
TTR-203ENST00000541025 SLCO4C1Q6ZQN7 724 aa10.3□□□□□ -0.76
TTR-203ENST00000541025 SIX5Q8N196 739 aa10.3□□□□□ -0.76
TTR-203ENST00000541025 NEUROD4Q9HD90 331 aa10.3□□□□□ -0.76
TTR-203ENST00000541025 AVENQ9NQS1 362 aaPredicted RBP10.3□□□□□ -0.76
TTR-203ENST00000541025 GGA1Q9UJY5 639 aa10.3□□□□□ -0.76
TTR-203ENST00000541025 ZNF232Q9UNY5 417 aa10.3□□□□□ -0.76
TTR-203ENST00000541025 MAP3K4Q9Y6R4 1608 aa10.29□□□□□ -0.76
TTR-203ENST00000541025 SHISA8B8ZZ34 492 aa10.29□□□□□ -0.76
TTR-203ENST00000541025 KHNYNO15037 678 aaKnown RBP10.29□□□□□ -0.76
TTR-203ENST00000541025 C7orf43Q8WVR3 580 aa10.29□□□□□ -0.76
TTR-203ENST00000541025 CHMP3Q9Y3E7 222 aa10.29□□□□□ -0.76
TTR-203ENST00000541025 GLI2P10070 1586 aa10.29□□□□□ -0.76
TTR-203ENST00000541025 DCDC2BA2VCK2 349 aa10.28□□□□□ -0.76
TTR-203ENST00000541025 IGHA1P01876 353 aa10.28□□□□□ -0.76
TTR-203ENST00000541025 RASA1P20936 1047 aa10.28□□□□□ -0.76
TTR-203ENST00000541025 PSMA6P60900 246 aaKnown RBP10.28□□□□□ -0.76
TTR-203ENST00000541025 C1orf53Q5VUE5 145 aa10.28□□□□□ -0.76
TTR-203ENST00000541025 CALR3Q96L12 384 aaKnown RBP10.28□□□□□ -0.76
TTR-203ENST00000541025 MKL2Q9ULH7 1088 aa10.28□□□□□ -0.76
TTR-203ENST00000541025 MAFBQ9Y5Q3 323 aaPredicted RBP10.28□□□□□ -0.76
TTR-203ENST00000541025 ATP10BO94823 1461 aa10.28□□□□□ -0.76
TTR-203ENST00000541025 NUP153P49790 1475 aaKnown RBP10.28□□□□□ -0.76
TTR-203ENST00000541025 EPRSP07814 1512 aaKnown RBP10.28□□□□□ -0.76
TTR-203ENST00000541025 DKK1O94907 266 aa10.27□□□□□ -0.77
TTR-203ENST00000541025 FAM69CQ0P6D2 419 aa10.27□□□□□ -0.77
TTR-203ENST00000541025 TBCELQ5QJ74 424 aa10.27□□□□□ -0.77
TTR-203ENST00000541025 BTBD6Q96KE9 485 aa10.27□□□□□ -0.77
TTR-203ENST00000541025 MARK1Q9P0L2 795 aa10.27□□□□□ -0.77
TTR-203ENST00000541025 WDR7Q9Y4E6 1490 aa10.27□□□□□ -0.77
TTR-203ENST00000541025 ARID3CA6NKF2 412 aa10.26□□□□□ -0.77
TTR-203ENST00000541025 EPXP11678 715 aa10.26□□□□□ -0.77
TTR-203ENST00000541025 POTEAQ6S8J7 498 aa10.26□□□□□ -0.77
TTR-203ENST00000541025 GAS2L2Q8NHY3 880 aa10.26□□□□□ -0.77
TTR-203ENST00000541025 PPP1R12CQ9BZL4 782 aa10.26□□□□□ -0.77
TTR-203ENST00000541025 TSPAN10Q9H1Z9 355 aaPredicted RBP10.26□□□□□ -0.77
TTR-203ENST00000541025 HCN2Q9UL51 889 aa10.26□□□□□ -0.77
TTR-203ENST00000541025 CFAP43Q8NDM7 1665 aa10.25□□□□□ -0.77
TTR-203ENST00000541025 NEURL1BA8MQ27 555 aa10.25□□□□□ -0.77
TTR-203ENST00000541025 EFSO43281 561 aa10.25□□□□□ -0.77
TTR-203ENST00000541025 CD33P20138 364 aa10.25□□□□□ -0.77
TTR-203ENST00000541025 ADH6P28332 368 aa10.25□□□□□ -0.77
TTR-203ENST00000541025 HIRAP54198 1017 aaPredicted RBP10.25□□□□□ -0.77
TTR-203ENST00000541025 SEC13P55735 322 aa10.25□□□□□ -0.77
TTR-203ENST00000541025 SNRPNP63162 240 aaKnown RBP10.25□□□□□ -0.77
TTR-203ENST00000541025 LARP1Q6PKG0 1096 aaKnown RBP10.25□□□□□ -0.77
TTR-203ENST00000541025 ZNF594Q96JF6 807 aaPredicted RBP10.25□□□□□ -0.77
TTR-203ENST00000541025 DCAF5Q96JK2 942 aa10.25□□□□□ -0.77
TTR-203ENST00000541025 PCF11O94913 1555 aaKnown RBP10.24□□□□□ -0.77
TTR-203ENST00000541025 SFI1A8K8P3 1242 aa10.24□□□□□ -0.77
TTR-203ENST00000541025 PIK3R2O00459 728 aa10.24□□□□□ -0.77
TTR-203ENST00000541025 LRRC69Q6ZNQ3 347 aa10.24□□□□□ -0.77
TTR-203ENST00000541025 RRAGCQ9HB90 399 aa10.24□□□□□ -0.77
TTR-203ENST00000541025 ANKIB1Q9P2G1 1089 aa10.24□□□□□ -0.77
TTR-203ENST00000541025 PRR12Q9ULL5 1215 aa10.24□□□□□ -0.77
TTR-203ENST00000541025 HECW1Q76N89 1606 aa10.24□□□□□ -0.77
TTR-203ENST00000541025 CDK13Q14004 1512 aaKnown RBP10.23□□□□□ -0.77
TTR-203ENST00000541025 AMPD1P23109 780 aa10.23□□□□□ -0.77
TTR-203ENST00000541025 STAG2Q8N3U4 1231 aa10.23□□□□□ -0.77
TTR-203ENST00000541025 TSEN2Q8NCE0 465 aaKnown RBP10.23□□□□□ -0.77
TTR-203ENST00000541025 ATAD2Q6PL18 1390 aa10.23□□□□□ -0.77
TTR-203ENST00000541025 SH3PXD2AQ5TCZ1 1133 aa10.22□□□□□ -0.77
TTR-203ENST00000541025 GPAT2Q6NUI2 795 aa10.22□□□□□ -0.77
TTR-203ENST00000541025 ALYREFQ86V81 257 aaKnown RBP10.22□□□□□ -0.77
TTR-203ENST00000541025 RHPN1Q8TCX5 695 aa10.22□□□□□ -0.77
TTR-203ENST00000541025 VRTNQ9H8Y1 702 aa10.22□□□□□ -0.77
TTR-203ENST00000541025 KLF15Q9UIH9 416 aa10.22□□□□□ -0.77
TTR-203ENST00000541025 HCN4Q9Y3Q4 1203 aa10.22□□□□□ -0.77
TTR-203ENST00000541025 ABCA9Q8IUA7 1624 aa10.22□□□□□ -0.77
TTR-203ENST00000541025 PPP1R12BO60237 982 aaPredicted RBP10.21□□□□□ -0.77
TTR-203ENST00000541025 KANK4Q5T7N3 995 aaPredicted RBP10.21□□□□□ -0.77
TTR-203ENST00000541025 LINC00114Q6XXX2 140 aa10.21□□□□□ -0.77
TTR-203ENST00000541025 STRN4Q9NRL3 753 aa10.21□□□□□ -0.77
TTR-203ENST00000541025 FMN1Q68DA7 1419 aa10.21□□□□□ -0.78
TTR-203ENST00000541025 KDM6BO15054 1643 aa10.21□□□□□ -0.78
TTR-203ENST00000541025 HOXB4P17483 251 aaPredicted RBP10.2□□□□□ -0.78
TTR-203ENST00000541025 CLIP1P30622 1438 aa10.2□□□□□ -0.78
TTR-203ENST00000541025 ZNF468Q5VIY5 522 aaPredicted RBP10.2□□□□□ -0.78
TTR-203ENST00000541025 PHACTR1Q9C0D0 580 aa10.2□□□□□ -0.78
TTR-203ENST00000541025 C21orf2O43822 256 aa10.19□□□□□ -0.78
TTR-203ENST00000541025 PTK7Q13308 1070 aa10.19□□□□□ -0.78
TTR-203ENST00000541025 LOC105371045A0A1W2PR82 267 aa10.18□□□□□ -0.78
TTR-203ENST00000541025 FAM196BA6NMK8 535 aa10.18□□□□□ -0.78
TTR-203ENST00000541025 LMOD1P29536 600 aaPredicted RBP10.18□□□□□ -0.78
TTR-203ENST00000541025 PCBP4P57723 403 aaKnown RBP10.18□□□□□ -0.78
TTR-203ENST00000541025 PLA2G4EQ3MJ16 856 aa10.18□□□□□ -0.78
TTR-203ENST00000541025 FCHSD1Q86WN1 690 aa10.18□□□□□ -0.78
TTR-203ENST00000541025 SCG3Q8WXD2 468 aaKnown RBP10.18□□□□□ -0.78
TTR-203ENST00000541025 HINFPQ9BQA5 517 aa10.18□□□□□ -0.78
TTR-203ENST00000541025 C2orf49Q9BVC5 232 aaPredicted RBP10.18□□□□□ -0.78
TTR-203ENST00000541025 TTC37Q6PGP7 1564 aa10.18□□□□□ -0.78
TTR-203ENST00000541025 CEP162Q5TB80 1403 aa10.17□□□□□ -0.78
TTR-203ENST00000541025 HIF1AQ16665 826 aa10.17□□□□□ -0.78
TTR-203ENST00000541025 CHSY3Q70JA7 882 aa10.17□□□□□ -0.78
TTR-203ENST00000541025 KIF14Q15058 1648 aa10.17□□□□□ -0.78
TTR-203ENST00000541025 GNB5O14775 395 aa10.16□□□□□ -0.78
TTR-203ENST00000541025 SFSWAPQ12872 951 aaKnown RBP10.16□□□□□ -0.78
TTR-203ENST00000541025 DPYDQ12882 1025 aa10.16□□□□□ -0.78
TTR-203ENST00000541025 CRTC2Q53ET0 693 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms