RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 AOX1Q06278 1338 aa12.35□□□□□ -0.43
CDC42SE1-207ENST00000540998 CCDC171Q6TFL3 1326 aa12.35□□□□□ -0.43
CDC42SE1-207ENST00000540998 UVSSAQ2YD98 709 aa12.35□□□□□ -0.43
CDC42SE1-207ENST00000540998 CCDC129Q6ZRS4 1044 aa12.35□□□□□ -0.43
CDC42SE1-207ENST00000540998 CCDC186Q7Z3E2 898 aa12.35□□□□□ -0.43
CDC42SE1-207ENST00000540998 IL17RAQ96F46 866 aa12.35□□□□□ -0.43
CDC42SE1-207ENST00000540998 MAP7D2Q96T17 732 aa12.35□□□□□ -0.43
CDC42SE1-207ENST00000540998 CCDC94Q9BW85 323 aaPredicted RBP12.35□□□□□ -0.43
CDC42SE1-207ENST00000540998 ZSWIM6Q9HCJ5 1215 aa12.35□□□□□ -0.43
CDC42SE1-207ENST00000540998 ECHDC1Q9NTX5 307 aa12.35□□□□□ -0.43
CDC42SE1-207ENST00000540998 KIF3AQ9Y496 699 aa12.35□□□□□ -0.43
CDC42SE1-207ENST00000540998 SASH1O94885 1247 aa12.35□□□□□ -0.43
CDC42SE1-207ENST00000540998 TYRO3Q06418 890 aa12.35□□□□□ -0.43
CDC42SE1-207ENST00000540998 NECTIN1Q15223 517 aa12.35□□□□□ -0.43
CDC42SE1-207ENST00000540998 DRC7Q8IY82 874 aa12.35□□□□□ -0.43
CDC42SE1-207ENST00000540998 PIK3C2AO00443 1686 aa12.35□□□□□ -0.43
CDC42SE1-207ENST00000540998 BTBD11A6QL63 1104 aa12.34□□□□□ -0.43
CDC42SE1-207ENST00000540998 SIRT1Q96EB6 747 aa12.34□□□□□ -0.43
CDC42SE1-207ENST00000540998 SUCLG2Q96I99 432 aa12.34□□□□□ -0.43
CDC42SE1-207ENST00000540998 NWD1Q149M9 1564 aa12.34□□□□□ -0.43
CDC42SE1-207ENST00000540998 SLC27A2O14975 620 aa12.34□□□□□ -0.43
CDC42SE1-207ENST00000540998 NR1I2O75469 434 aa12.34□□□□□ -0.43
CDC42SE1-207ENST00000540998 VPS53Q5VIR6 699 aa12.34□□□□□ -0.43
CDC42SE1-207ENST00000540998 KAZALD1Q96I82 304 aa12.34□□□□□ -0.43
CDC42SE1-207ENST00000540998 SEC62Q99442 399 aaKnown RBP12.34□□□□□ -0.43
CDC42SE1-207ENST00000540998 DNAJC25Q9H1X3 360 aa12.34□□□□□ -0.43
CDC42SE1-207ENST00000540998 BICC1Q9H694 974 aaKnown RBP12.34□□□□□ -0.43
CDC42SE1-207ENST00000540998 SPTLC3Q9NUV7 552 aa12.34□□□□□ -0.43
CDC42SE1-207ENST00000540998 TAOK2Q9UL54 1235 aa12.34□□□□□ -0.43
CDC42SE1-207ENST00000540998 TOPAZ1Q8N9V7 1692 aa12.34□□□□□ -0.43
CDC42SE1-207ENST00000540998 HDGFP51858 240 aaKnown RBP12.34□□□□□ -0.43
CDC42SE1-207ENST00000540998 NUP62CLQ9H1M0 184 aa12.34□□□□□ -0.43
CDC42SE1-207ENST00000540998 CBX8Q9HC52 389 aa12.34□□□□□ -0.43
CDC42SE1-207ENST00000540998 TEFQ10587 303 aa12.33□□□□□ -0.44
CDC42SE1-207ENST00000540998 ZNF530Q6P9A1 599 aaPredicted RBP12.33□□□□□ -0.44
CDC42SE1-207ENST00000540998 FSD1Q9BTV5 496 aa12.33□□□□□ -0.44
CDC42SE1-207ENST00000540998 TTC21AQ8NDW8 1320 aa12.33□□□□□ -0.44
CDC42SE1-207ENST00000540998 CCDC192P0DO97 292 aa12.33□□□□□ -0.44
CDC42SE1-207ENST00000540998 KCNA6P17658 529 aa12.33□□□□□ -0.44
CDC42SE1-207ENST00000540998 TOB2Q14106 344 aaPredicted RBP12.32□□□□□ -0.44
CDC42SE1-207ENST00000540998 MAP3K11Q16584 847 aa12.32□□□□□ -0.44
CDC42SE1-207ENST00000540998 LMOD2Q6P5Q4 547 aa12.32□□□□□ -0.44
CDC42SE1-207ENST00000540998 TNMDQ9H2S6 317 aa12.32□□□□□ -0.44
CDC42SE1-207ENST00000540998 MYL6BP14649 208 aa12.32□□□□□ -0.44
CDC42SE1-207ENST00000540998 ZSCAN20P17040 1043 aaPredicted RBP12.32□□□□□ -0.44
CDC42SE1-207ENST00000540998 SLC39A6Q13433 755 aa12.32□□□□□ -0.44
CDC42SE1-207ENST00000540998 PGBD1Q96JS3 809 aa12.32□□□□□ -0.44
CDC42SE1-207ENST00000540998 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.32□□□□□ -0.44
CDC42SE1-207ENST00000540998 ATP6V1DQ9Y5K8 247 aa12.32□□□□□ -0.44
CDC42SE1-207ENST00000540998 V9GYY5 206 aaPredicted RBP12.32□□□□□ -0.44
CDC42SE1-207ENST00000540998 A0A0G2JLW4 131 aa12.32□□□□□ -0.44
CDC42SE1-207ENST00000540998 ZKSCAN1P17029 563 aaPredicted RBP12.32□□□□□ -0.44
CDC42SE1-207ENST00000540998 KRT85P78386 507 aa12.32□□□□□ -0.44
CDC42SE1-207ENST00000540998 CCDC144BQ3MJ40 725 aa12.32□□□□□ -0.44
CDC42SE1-207ENST00000540998 CCDC144CPQ8IYA2 1237 aa12.32□□□□□ -0.44
CDC42SE1-207ENST00000540998 ZNF592Q92610 1267 aa12.32□□□□□ -0.44
CDC42SE1-207ENST00000540998 SPATA32Q96LK8 384 aa12.32□□□□□ -0.44
CDC42SE1-207ENST00000540998 PRIMPOLQ96LW4 560 aa12.32□□□□□ -0.44
CDC42SE1-207ENST00000540998 TRIM5Q9C035 493 aa12.32□□□□□ -0.44
CDC42SE1-207ENST00000540998 HMGN5P82970 282 aaKnown RBP12.31□□□□□ -0.44
CDC42SE1-207ENST00000540998 EPHA10Q5JZY3 1008 aa12.31□□□□□ -0.44
CDC42SE1-207ENST00000540998 BICD2Q8TD16 824 aa12.31□□□□□ -0.44
CDC42SE1-207ENST00000540998 USP16Q9Y5T5 823 aa12.31□□□□□ -0.44
CDC42SE1-207ENST00000540998 DIP2BQ9P265 1576 aa12.31□□□□□ -0.44
CDC42SE1-207ENST00000540998 LRRC37A3O60309 1634 aa12.31□□□□□ -0.44
CDC42SE1-207ENST00000540998 GOLGA6L4A6NEF3 574 aa12.31□□□□□ -0.44
CDC42SE1-207ENST00000540998 HTATSF1O43719 755 aaKnown RBP12.31□□□□□ -0.44
CDC42SE1-207ENST00000540998 FAM200AQ8TCP9 573 aa12.31□□□□□ -0.44
CDC42SE1-207ENST00000540998 SYTL4Q96C24 671 aaPredicted RBP12.31□□□□□ -0.44
CDC42SE1-207ENST00000540998 GUCY1B3Q02153 619 aa12.3□□□□□ -0.44
CDC42SE1-207ENST00000540998 BLOC1S2Q6QNY1 142 aa12.3□□□□□ -0.44
CDC42SE1-207ENST00000540998 RUFY2Q8WXA3 655 aa12.3□□□□□ -0.44
CDC42SE1-207ENST00000540998 COL15A1P39059 1388 aa12.3□□□□□ -0.44
CDC42SE1-207ENST00000540998 USP27XA6NNY8 438 aa12.3□□□□□ -0.44
CDC42SE1-207ENST00000540998 LETM1O95202 739 aaPredicted RBP12.3□□□□□ -0.44
CDC42SE1-207ENST00000540998 PDCL2Q8N4E4 241 aa12.3□□□□□ -0.44
CDC42SE1-207ENST00000540998 LEO1Q8WVC0 666 aaPredicted RBP12.3□□□□□ -0.44
CDC42SE1-207ENST00000540998 MAP4K1Q92918 833 aa12.3□□□□□ -0.44
CDC42SE1-207ENST00000540998 NAP1L2Q9ULW6 460 aaPredicted RBP12.3□□□□□ -0.44
CDC42SE1-207ENST00000540998 TTC41PQ6P2S7 1318 aa12.3□□□□□ -0.44
CDC42SE1-207ENST00000540998 EVI5LQ96CN4 794 aa12.29□□□□□ -0.44
CDC42SE1-207ENST00000540998 PPP6R1Q9UPN7 881 aa12.29□□□□□ -0.44
CDC42SE1-207ENST00000540998 UBR1Q8IWV7 1749 aa12.29□□□□□ -0.44
CDC42SE1-207ENST00000540998 AGLP35573 1532 aa12.29□□□□□ -0.44
CDC42SE1-207ENST00000540998 CHST3Q7LGC8 479 aa12.29□□□□□ -0.44
CDC42SE1-207ENST00000540998 SMAP1Q8IYB5 467 aaPredicted RBP12.29□□□□□ -0.44
CDC42SE1-207ENST00000540998 CACTINQ8WUQ7 758 aaKnown RBP12.29□□□□□ -0.44
CDC42SE1-207ENST00000540998 PXDNQ92626 1479 aa12.29□□□□□ -0.44
CDC42SE1-207ENST00000540998 BRF1Q92994 677 aa12.29□□□□□ -0.44
CDC42SE1-207ENST00000540998 DNAJC2Q99543 621 aaKnown RBP12.29□□□□□ -0.44
CDC42SE1-207ENST00000540998 SH2B1Q9NRF2 756 aaPredicted RBP12.29□□□□□ -0.44
CDC42SE1-207ENST00000540998 HSP90B1P14625 803 aaKnown RBP12.28□□□□□ -0.44
CDC42SE1-207ENST00000540998 GTF2F1P35269 517 aaKnown RBP eCLIP12.28□□□□□ -0.449e-8■■■□□ 17.1
CDC42SE1-207ENST00000540998 C11orf57Q6ZUT1 292 aaPredicted RBP12.28□□□□□ -0.44
CDC42SE1-207ENST00000540998 DIP2AQ14689 1571 aa12.28□□□□□ -0.44
CDC42SE1-207ENST00000540998 PXDNLA1KZ92 1463 aa12.28□□□□□ -0.44
CDC42SE1-207ENST00000540998 NPHP4O75161 1426 aaPredicted RBP12.28□□□□□ -0.44
CDC42SE1-207ENST00000540998 RPS6KB1P23443 525 aa12.28□□□□□ -0.44
CDC42SE1-207ENST00000540998 CEMIPQ8WUJ3 1361 aa12.28□□□□□ -0.44
CDC42SE1-207ENST00000540998 RGPD2P0DJD1 1756 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms