RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 ANKRD20A12PQ8NF67 263 aa11.48□□□□□ -0.57
CLDN2-202ENST00000540876 TRIM5Q9C035 493 aa11.48□□□□□ -0.57
CLDN2-202ENST00000540876 TRMT1Q9NXH9 659 aaKnown RBP11.48□□□□□ -0.57
CLDN2-202ENST00000540876 NOB1Q9ULX3 412 aaKnown RBP11.48□□□□□ -0.57
CLDN2-202ENST00000540876 ERBB3P21860 1342 aa11.48□□□□□ -0.57
CLDN2-202ENST00000540876 POLR3AO14802 1390 aaPredicted RBP11.48□□□□□ -0.57
CLDN2-202ENST00000540876 ATP6V1AP38606 617 aa11.47□□□□□ -0.57
CLDN2-202ENST00000540876 CACTINQ8WUQ7 758 aaKnown RBP11.47□□□□□ -0.57
CLDN2-202ENST00000540876 TSR2Q969E8 191 aaKnown RBP11.47□□□□□ -0.57
CLDN2-202ENST00000540876 SGSM3Q96HU1 749 aa11.47□□□□□ -0.57
CLDN2-202ENST00000540876 CNPY2Q9Y2B0 182 aa11.47□□□□□ -0.57
CLDN2-202ENST00000540876 RAD50Q92878 1312 aa11.47□□□□□ -0.57
CLDN2-202ENST00000540876 ARHGAP29Q52LW3 1261 aa11.47□□□□□ -0.57
CLDN2-202ENST00000540876 MCTP2Q6DN12 878 aa11.47□□□□□ -0.57
CLDN2-202ENST00000540876 MED4Q9NPJ6 270 aa11.47□□□□□ -0.57
CLDN2-202ENST00000540876 ZNF853P0CG23 659 aa11.46□□□□□ -0.57
CLDN2-202ENST00000540876 WDR63Q8IWG1 891 aa11.46□□□□□ -0.57
CLDN2-202ENST00000540876 C1orf115Q9H7X2 142 aa11.46□□□□□ -0.57
CLDN2-202ENST00000540876 ANKRD65E5RJM6 399 aa11.46□□□□□ -0.57
CLDN2-202ENST00000540876 GSPT1P15170 499 aaKnown RBP11.46□□□□□ -0.57
CLDN2-202ENST00000540876 MAP2K1Q02750 393 aaPredicted RBP11.46□□□□□ -0.57
CLDN2-202ENST00000540876 PPP2R5AQ15172 486 aa11.46□□□□□ -0.57
CLDN2-202ENST00000540876 LUZP1Q86V48 1076 aa11.46□□□□□ -0.57
CLDN2-202ENST00000540876 COG3Q96JB2 828 aa11.46□□□□□ -0.57
CLDN2-202ENST00000540876 GSCP56915 257 aaPredicted RBP11.46□□□□□ -0.58
CLDN2-202ENST00000540876 LRCH2Q5VUJ6 765 aa11.46□□□□□ -0.58
CLDN2-202ENST00000540876 SSH1Q8WYL5 1049 aa11.46□□□□□ -0.58
CLDN2-202ENST00000540876 FUCA2Q9BTY2 467 aa11.46□□□□□ -0.58
CLDN2-202ENST00000540876 ARGLU1Q9NWB6 273 aaPredicted RBP11.46□□□□□ -0.58
CLDN2-202ENST00000540876 EMILIN1Q9Y6C2 1016 aa11.46□□□□□ -0.58
CLDN2-202ENST00000540876 EIF3CLB5ME19 914 aaKnown RBP11.45□□□□□ -0.58
CLDN2-202ENST00000540876 TOM1O60784 492 aa11.45□□□□□ -0.58
CLDN2-202ENST00000540876 SEC31AO94979 1220 aaKnown RBP11.45□□□□□ -0.58
CLDN2-202ENST00000540876 NBPF20Q3BBV1 942 aa11.45□□□□□ -0.58
CLDN2-202ENST00000540876 TTLL5Q6EMB2 1281 aa11.45□□□□□ -0.58
CLDN2-202ENST00000540876 LRRN4CLQ8ND94 238 aa11.45□□□□□ -0.58
CLDN2-202ENST00000540876 CFAP44Q96MT7 982 aa11.45□□□□□ -0.58
CLDN2-202ENST00000540876 EIF3CQ99613 913 aaKnown RBP11.45□□□□□ -0.58
CLDN2-202ENST00000540876 CCDC171Q6TFL3 1326 aa11.45□□□□□ -0.58
CLDN2-202ENST00000540876 EDC4Q6P2E9 1401 aaKnown RBP11.45□□□□□ -0.58
CLDN2-202ENST00000540876 DCCP43146 1447 aa11.45□□□□□ -0.58
CLDN2-202ENST00000540876 FIBPO43427 364 aa11.45□□□□□ -0.58
CLDN2-202ENST00000540876 CCDC192P0DO97 292 aa11.45□□□□□ -0.58
CLDN2-202ENST00000540876 INTS3Q68E01 1043 aaKnown RBP11.45□□□□□ -0.58
CLDN2-202ENST00000540876 LEKR1Q6ZMV7 388 aa11.45□□□□□ -0.58
CLDN2-202ENST00000540876 PPM1EQ8WY54 764 aa11.45□□□□□ -0.58
CLDN2-202ENST00000540876 CCDC34Q96HJ3 373 aa11.45□□□□□ -0.58
CLDN2-202ENST00000540876 CCDC189A1A4V9 331 aa11.44□□□□□ -0.58
CLDN2-202ENST00000540876 SEMA3FQ13275 785 aa11.44□□□□□ -0.58
CLDN2-202ENST00000540876 ACTN2P35609 894 aa11.44□□□□□ -0.58
CLDN2-202ENST00000540876 UBE2HP62256 183 aa11.44□□□□□ -0.58
CLDN2-202ENST00000540876 EXOSC9Q06265 439 aaKnown RBP11.44□□□□□ -0.58
CLDN2-202ENST00000540876 RPAINQ86UA6 219 aa11.44□□□□□ -0.58
CLDN2-202ENST00000540876 GCC1Q96CN9 775 aa11.44□□□□□ -0.58
CLDN2-202ENST00000540876 SSH2Q76I76 1423 aa11.44□□□□□ -0.58
CLDN2-202ENST00000540876 NPHP3Q7Z494 1330 aa11.43□□□□□ -0.58
CLDN2-202ENST00000540876 MCCP23508 829 aa11.43□□□□□ -0.58
CLDN2-202ENST00000540876 SMC1AQ14683 1233 aaKnown RBP11.43□□□□□ -0.58
CLDN2-202ENST00000540876 GORABQ5T7V8 394 aa11.43□□□□□ -0.58
CLDN2-202ENST00000540876 REXO1L1PQ8IX06 675 aa11.43□□□□□ -0.58
CLDN2-202ENST00000540876 CLIP2Q9UDT6 1046 aa11.43□□□□□ -0.58
CLDN2-202ENST00000540876 TOPAZ1Q8N9V7 1692 aa11.43□□□□□ -0.58
CLDN2-202ENST00000540876 WDR33Q9C0J8 1336 aaKnown RBP11.43□□□□□ -0.58
CLDN2-202ENST00000540876 ZRANB2O95218 330 aaKnown RBP eCLIP11.43□□□□□ -0.58
CLDN2-202ENST00000540876 CASTP20810 708 aaKnown RBP11.43□□□□□ -0.58
CLDN2-202ENST00000540876 ZC3H6P61129 1189 aaKnown RBP11.43□□□□□ -0.58
CLDN2-202ENST00000540876 SWT1Q5T5J6 900 aaKnown RBP11.43□□□□□ -0.58
CLDN2-202ENST00000540876 FILIP1Q7Z7B0 1213 aa11.43□□□□□ -0.58
CLDN2-202ENST00000540876 FAM200AQ8TCP9 573 aa11.43□□□□□ -0.58
CLDN2-202ENST00000540876 ZNF75DP51815 510 aa11.42□□□□□ -0.58
CLDN2-202ENST00000540876 BIRC2Q13490 618 aa11.42□□□□□ -0.58
CLDN2-202ENST00000540876 ARID5BQ14865 1188 aa11.42□□□□□ -0.58
CLDN2-202ENST00000540876 CCDC144BQ3MJ40 725 aa11.42□□□□□ -0.58
CLDN2-202ENST00000540876 MMS22LQ6ZRQ5 1243 aa11.42□□□□□ -0.58
CLDN2-202ENST00000540876 NYAP1Q6ZVC0 841 aa11.42□□□□□ -0.58
CLDN2-202ENST00000540876 SUGP1Q8IWZ8 645 aaKnown RBP11.42□□□□□ -0.58
CLDN2-202ENST00000540876 CCDC144CPQ8IYA2 1237 aa11.42□□□□□ -0.58
CLDN2-202ENST00000540876 SYTL4Q96C24 671 aaPredicted RBP11.42□□□□□ -0.58
CLDN2-202ENST00000540876 SRCIN1Q9C0H9 1055 aa11.42□□□□□ -0.58
CLDN2-202ENST00000540876 PDRG1Q9NUG6 133 aa11.42□□□□□ -0.58
CLDN2-202ENST00000540876 IVLP07476 585 aa11.42□□□□□ -0.58
CLDN2-202ENST00000540876 FOXR1Q6PIV2 292 aa11.42□□□□□ -0.58
CLDN2-202ENST00000540876 CASC1Q6TDU7 716 aa11.42□□□□□ -0.58
CLDN2-202ENST00000540876 ADAM21Q9UKJ8 722 aa11.42□□□□□ -0.58
CLDN2-202ENST00000540876 CHMP3Q9Y3E7 222 aa11.42□□□□□ -0.58
CLDN2-202ENST00000540876 CCDC27Q2M243 656 aa11.42□□□□□ -0.58
CLDN2-202ENST00000540876 RAI14Q9P0K7 980 aa11.42□□□□□ -0.58
CLDN2-202ENST00000540876 SH3BP1Q9Y3L3 701 aa11.42□□□□□ -0.58
CLDN2-202ENST00000540876 SKILP12757 684 aa11.41□□□□□ -0.58
CLDN2-202ENST00000540876 UBXN4Q92575 508 aa11.41□□□□□ -0.58
CLDN2-202ENST00000540876 MNAT1P51948 309 aa11.41□□□□□ -0.58
CLDN2-202ENST00000540876 DNAAF4Q8WXU2 420 aa11.41□□□□□ -0.58
CLDN2-202ENST00000540876 EXOC4Q96A65 974 aa11.41□□□□□ -0.58
CLDN2-202ENST00000540876 CAMK4Q16566 473 aa11.4□□□□□ -0.58
CLDN2-202ENST00000540876 LTV1Q96GA3 475 aaPredicted RBP11.4□□□□□ -0.58
CLDN2-202ENST00000540876 KIF2AO00139 706 aaPredicted RBP11.4□□□□□ -0.58
CLDN2-202ENST00000540876 CALR3Q96L12 384 aaKnown RBP11.4□□□□□ -0.58
CLDN2-202ENST00000540876 CEP89Q96ST8 783 aa11.4□□□□□ -0.58
CLDN2-202ENST00000540876 PLCD4Q9BRC7 762 aa11.4□□□□□ -0.58
CLDN2-202ENST00000540876 SPATA31A3Q5VYP0 1347 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms