RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 NUDT18Q6ZVK8 323 aa12.62□□□□□ -0.39
LMO3-224ENST00000540848 NBPF26B4DH59 902 aa12.61□□□□□ -0.39
LMO3-224ENST00000540848 CEP85Q6P2H3 762 aa12.61□□□□□ -0.39
LMO3-224ENST00000540848 LMOD2Q6P5Q4 547 aa12.61□□□□□ -0.39
LMO3-224ENST00000540848 USHBP1Q8N6Y0 703 aa12.61□□□□□ -0.39
LMO3-224ENST00000540848 C1orf115Q9H7X2 142 aa12.61□□□□□ -0.39
LMO3-224ENST00000540848 GNAI2P04899 355 aa12.6□□□□□ -0.39
LMO3-224ENST00000540848 RTL5Q5HYW3 569 aaPredicted RBP12.6□□□□□ -0.39
LMO3-224ENST00000540848 CPDO75976 1380 aa12.6□□□□□ -0.39
LMO3-224ENST00000540848 PXDNQ92626 1479 aa12.6□□□□□ -0.39
LMO3-224ENST00000540848 RNMTO43148 476 aaKnown RBP12.6□□□□□ -0.39
LMO3-224ENST00000540848 EIF4A1P60842 406 aaKnown RBP12.6□□□□□ -0.39
LMO3-224ENST00000540848 XPCQ01831 940 aaPredicted RBP12.6□□□□□ -0.39
LMO3-224ENST00000540848 FKBP5Q13451 457 aaPredicted RBP12.6□□□□□ -0.39
LMO3-224ENST00000540848 HDGFL1Q5TGJ6 251 aa12.6□□□□□ -0.39
LMO3-224ENST00000540848 SIPA1L3O60292 1781 aaPredicted RBP12.59□□□□□ -0.39
LMO3-224ENST00000540848 COL18A1P39060 1754 aa12.59□□□□□ -0.39
LMO3-224ENST00000540848 CRYBG1Q9Y4K1 1723 aa12.59□□□□□ -0.39
LMO3-224ENST00000540848 ZBTB7CA1YPR0 619 aa12.59□□□□□ -0.39
LMO3-224ENST00000540848 MEIS3Q99687 375 aa12.59□□□□□ -0.39
LMO3-224ENST00000540848 PLCB2Q00722 1185 aa12.58□□□□□ -0.4
LMO3-224ENST00000540848 G2E3Q7L622 706 aa12.58□□□□□ -0.4
LMO3-224ENST00000540848 LRRC59Q96AG4 307 aaKnown RBP12.58□□□□□ -0.4
LMO3-224ENST00000540848 C22orf23Q9BZE7 217 aa12.58□□□□□ -0.4
LMO3-224ENST00000540848 SPATA31A3Q5VYP0 1347 aa12.57□□□□□ -0.4
LMO3-224ENST00000540848 XIRP1Q702N8 1843 aaKnown RBP12.57□□□□□ -0.4
LMO3-224ENST00000540848 BTBD11A6QL63 1104 aa12.57□□□□□ -0.4
LMO3-224ENST00000540848 SLC4A10Q6U841 1118 aa12.57□□□□□ -0.4
LMO3-224ENST00000540848 RAPGEF4Q8WZA2 1011 aa12.57□□□□□ -0.4
LMO3-224ENST00000540848 SPG7Q9UQ90 795 aa12.57□□□□□ -0.4
LMO3-224ENST00000540848 HDAC5Q9UQL6 1122 aa12.57□□□□□ -0.4
LMO3-224ENST00000540848 RGPD5Q99666 1765 aa12.57□□□□□ -0.4
LMO3-224ENST00000540848 HEG1Q9ULI3 1381 aa12.57□□□□□ -0.4
LMO3-224ENST00000540848 IBTKQ9P2D0 1353 aaPredicted RBP12.56□□□□□ -0.4
LMO3-224ENST00000540848 CDC45O75419 566 aa12.56□□□□□ -0.4
LMO3-224ENST00000540848 TATP17735 454 aaPredicted RBP12.56□□□□□ -0.4
LMO3-224ENST00000540848 RBM25P49756 843 aaKnown RBP12.56□□□□□ -0.4
LMO3-224ENST00000540848 LGR6Q9HBX8 967 aa12.56□□□□□ -0.4
LMO3-224ENST00000540848 STRCQ7RTU9 1775 aa12.55□□□□□ -0.4
LMO3-224ENST00000540848 SCN11AQ9UI33 1791 aa12.55□□□□□ -0.4
LMO3-224ENST00000540848 F6X3S4 739 aa12.55□□□□□ -0.4
LMO3-224ENST00000540848 HSP90AB1P08238 724 aaKnown RBP12.55□□□□□ -0.4
LMO3-224ENST00000540848 PPP4CP60510 307 aa12.55□□□□□ -0.4
LMO3-224ENST00000540848 PLEKHM2Q8IWE5 1019 aa12.55□□□□□ -0.4
LMO3-224ENST00000540848 DBF4Q9UBU7 674 aaPredicted RBP12.55□□□□□ -0.4
LMO3-224ENST00000540848 PKD1L3Q7Z443 1732 aa12.55□□□□□ -0.4
LMO3-224ENST00000540848 SEMA3EO15041 775 aa12.54□□□□□ -0.4
LMO3-224ENST00000540848 MFAP1P55081 439 aaKnown RBP12.54□□□□□ -0.4
LMO3-224ENST00000540848 ATP8B2P98198 1209 aa12.54□□□□□ -0.4
LMO3-224ENST00000540848 PTGDRQ13258 359 aa12.54□□□□□ -0.4
LMO3-224ENST00000540848 CASC1Q6TDU7 716 aa12.54□□□□□ -0.4
LMO3-224ENST00000540848 MPRIPQ6WCQ1 1025 aa12.54□□□□□ -0.4
LMO3-224ENST00000540848 OSBPL3Q9H4L5 887 aa12.54□□□□□ -0.4
LMO3-224ENST00000540848 MRC1P22897 1456 aa12.53□□□□□ -0.4
LMO3-224ENST00000540848 RGS20O76081 388 aa12.53□□□□□ -0.4
LMO3-224ENST00000540848 ZC3H6P61129 1189 aaKnown RBP12.53□□□□□ -0.4
LMO3-224ENST00000540848 KCNC4Q03721 635 aa12.53□□□□□ -0.4
LMO3-224ENST00000540848 TTC22Q5TAA0 569 aa12.53□□□□□ -0.4
LMO3-224ENST00000540848 SRCIN1Q9C0H9 1055 aa12.53□□□□□ -0.4
LMO3-224ENST00000540848 PARP4Q9UKK3 1724 aaKnown RBP12.53□□□□□ -0.4
LMO3-224ENST00000540848 UBTFL1P0CB47 393 aaPredicted RBP12.52□□□□□ -0.4
LMO3-224ENST00000540848 DNAAF4Q8WXU2 420 aa12.52□□□□□ -0.4
LMO3-224ENST00000540848 NLRP2Q9NX02 1062 aa12.52□□□□□ -0.4
LMO3-224ENST00000540848 HYPKQ9NX55 129 aa12.52□□□□□ -0.4
LMO3-224ENST00000540848 GIGYF1O75420 1035 aaPredicted RBP12.52□□□□□ -0.41
LMO3-224ENST00000540848 ALDH1L1O75891 902 aa12.52□□□□□ -0.41
LMO3-224ENST00000540848 TJAP1Q5JTD0 557 aa12.52□□□□□ -0.41
LMO3-224ENST00000540848 BRINP3Q76B58 766 aa12.52□□□□□ -0.41
LMO3-224ENST00000540848 IFNL2Q8IZJ0 200 aa12.52□□□□□ -0.41
LMO3-224ENST00000540848 SOS2Q07890 1332 aaPredicted RBP12.51□□□□□ -0.41
LMO3-224ENST00000540848 RAB11FIP3O75154 756 aa12.51□□□□□ -0.41
LMO3-224ENST00000540848 TBC1D9Q6ZT07 1266 aa12.51□□□□□ -0.41
LMO3-224ENST00000540848 SNX21Q969T3 373 aa12.51□□□□□ -0.41
LMO3-224ENST00000540848 DCAF5Q96JK2 942 aa12.51□□□□□ -0.41
LMO3-224ENST00000540848 SLC52A2Q9HAB3 445 aa12.51□□□□□ -0.41
LMO3-224ENST00000540848 CHPF2Q9P2E5 772 aa12.51□□□□□ -0.41
LMO3-224ENST00000540848 AOX1Q06278 1338 aa12.5□□□□□ -0.41
LMO3-224ENST00000540848 DDX58O95786 925 aaKnown RBP12.5□□□□□ -0.41
LMO3-224ENST00000540848 CSB-PGBD3P0DP91 1061 aa12.5□□□□□ -0.41
LMO3-224ENST00000540848 PHKG2P15735 406 aa12.5□□□□□ -0.41
LMO3-224ENST00000540848 EIF2S2P20042 333 aaKnown RBP12.5□□□□□ -0.41
LMO3-224ENST00000540848 HSPA2P54652 639 aa12.5□□□□□ -0.41
LMO3-224ENST00000540848 HSP90AB4PQ58FF6 505 aa12.5□□□□□ -0.41
LMO3-224ENST00000540848 SWT1Q5T5J6 900 aaKnown RBP12.5□□□□□ -0.41
LMO3-224ENST00000540848 LRRCC1Q9C099 1032 aa12.5□□□□□ -0.41
LMO3-224ENST00000540848 USP44Q9H0E7 712 aa12.5□□□□□ -0.41
LMO3-224ENST00000540848 HSCBQ8IWL3 235 aa12.49□□□□□ -0.41
LMO3-224ENST00000540848 SSH3Q8TE77 659 aa12.49□□□□□ -0.41
LMO3-224ENST00000540848 NECTIN2Q92692 538 aa12.49□□□□□ -0.41
LMO3-224ENST00000540848 TBC1D2Q9BYX2 928 aa12.49□□□□□ -0.41
LMO3-224ENST00000540848 MEGF6O75095 1541 aa12.49□□□□□ -0.41
LMO3-224ENST00000540848 KDM6AO15550 1401 aaPredicted RBP12.49□□□□□ -0.41
LMO3-224ENST00000540848 GSPT1P15170 499 aaKnown RBP12.48□□□□□ -0.41
LMO3-224ENST00000540848 SLC4A3P48751 1232 aa12.48□□□□□ -0.41
LMO3-224ENST00000540848 APLP1P51693 650 aa12.48□□□□□ -0.41
LMO3-224ENST00000540848 BEND3Q5T5X7 828 aa12.48□□□□□ -0.41
LMO3-224ENST00000540848 PHAXQ9H814 394 aaKnown RBP12.48□□□□□ -0.41
LMO3-224ENST00000540848 DDX21Q9NR30 783 aaKnown RBP eCLIP12.48□□□□□ -0.41
LMO3-224ENST00000540848 SLAIN2Q9P270 581 aa12.48□□□□□ -0.41
LMO3-224ENST00000540848 ZNF790Q6PG37 636 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 1284.5 ms