RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 UBE3BQ7Z3V4 1068 aa11.59□□□□□ -0.55
LCOR-209ENST00000540664 KLHDC4Q8TBB5 520 aa11.59□□□□□ -0.55
LCOR-209ENST00000540664 TMX3Q96JJ7 454 aa11.59□□□□□ -0.55
LCOR-209ENST00000540664 ITGB4P16144 1822 aa11.59□□□□□ -0.55
LCOR-209ENST00000540664 WNK3Q9BYP7 1800 aa11.59□□□□□ -0.55
LCOR-209ENST00000540664 A1BGP04217 495 aa11.58□□□□□ -0.56
LCOR-209ENST00000540664 FOXO4P98177 505 aa11.58□□□□□ -0.56
LCOR-209ENST00000540664 ZGPATQ8N5A5 531 aaKnown RBP11.58□□□□□ -0.56
LCOR-209ENST00000540664 RUFY2Q8WXA3 655 aa11.58□□□□□ -0.56
LCOR-209ENST00000540664 KCNB2Q92953 911 aa11.58□□□□□ -0.56
LCOR-209ENST00000540664 TLR7Q9NYK1 1049 aaKnown RBP11.58□□□□□ -0.56
LCOR-209ENST00000540664 CWC27Q6UX04 472 aaKnown RBP11.58□□□□□ -0.56
LCOR-209ENST00000540664 VSIG10Q8N0Z9 540 aa11.58□□□□□ -0.56
LCOR-209ENST00000540664 INTS4Q96HW7 963 aaKnown RBP11.58□□□□□ -0.56
LCOR-209ENST00000540664 CCDC8Q9H0W5 538 aaPredicted RBP11.58□□□□□ -0.56
LCOR-209ENST00000540664 SIL1Q9H173 461 aa11.58□□□□□ -0.56
LCOR-209ENST00000540664 SNX14Q9Y5W7 946 aa11.58□□□□□ -0.56
LCOR-209ENST00000540664 DIAPH3Q9NSV4 1193 aa11.57□□□□□ -0.56
LCOR-209ENST00000540664 CWC25Q9NXE8 425 aaPredicted RBP11.57□□□□□ -0.56
LCOR-209ENST00000540664 FSD2A1L4K1 749 aa11.56□□□□□ -0.56
LCOR-209ENST00000540664 HIP1O00291 1037 aa11.56□□□□□ -0.56
LCOR-209ENST00000540664 BAG4O95429 457 aaKnown RBP11.56□□□□□ -0.56
LCOR-209ENST00000540664 SKOR2Q2VWA4 1001 aaPredicted RBP11.56□□□□□ -0.56
LCOR-209ENST00000540664 CCDC191Q8NCU4 936 aa11.56□□□□□ -0.56
LCOR-209ENST00000540664 JARID2Q92833 1246 aaPredicted RBP11.56□□□□□ -0.56
LCOR-209ENST00000540664 TTC14Q96N46 770 aa11.56□□□□□ -0.56
LCOR-209ENST00000540664 TMOD3Q9NYL9 352 aa11.56□□□□□ -0.56
LCOR-209ENST00000540664 TNNI3KQ59H18 835 aa11.56□□□□□ -0.56
LCOR-209ENST00000540664 RASEFQ8IZ41 740 aa11.56□□□□□ -0.56
LCOR-209ENST00000540664 ZDHHC9Q9Y397 364 aa11.56□□□□□ -0.56
LCOR-209ENST00000540664 FPGT-TNNI3KV9GXZ4 949 aa11.56□□□□□ -0.56
LCOR-209ENST00000540664 JCADQ9P266 1359 aa11.56□□□□□ -0.56
LCOR-209ENST00000540664 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.55□□□□□ -0.56
LCOR-209ENST00000540664 ATP5JP18859 108 aa11.55□□□□□ -0.56
LCOR-209ENST00000540664 PKP1Q13835 747 aa11.55□□□□□ -0.56
LCOR-209ENST00000540664 KIAA1211Q6ZU35 1233 aa11.55□□□□□ -0.56
LCOR-209ENST00000540664 PIGBQ92521 554 aa11.55□□□□□ -0.56
LCOR-209ENST00000540664 ISCA1Q9BUE6 129 aa11.55□□□□□ -0.56
LCOR-209ENST00000540664 TEX13AQ9BXU3 409 aaPredicted RBP11.55□□□□□ -0.56
LCOR-209ENST00000540664 RFX7Q2KHR2 1363 aa11.55□□□□□ -0.56
LCOR-209ENST00000540664 NRAPQ86VF7 1730 aa11.55□□□□□ -0.56
LCOR-209ENST00000540664 TFCP2Q12800 502 aa11.55□□□□□ -0.56
LCOR-209ENST00000540664 TRIM28Q13263 835 aaKnown RBP11.55□□□□□ -0.56
LCOR-209ENST00000540664 POTEHQ6S545 545 aa11.55□□□□□ -0.56
LCOR-209ENST00000540664 LMBR1LQ6UX01 489 aa11.55□□□□□ -0.56
LCOR-209ENST00000540664 UPF3BQ9BZI7 483 aaKnown RBP11.55□□□□□ -0.56
LCOR-209ENST00000540664 DBNLQ9UJU6 430 aaKnown RBP11.55□□□□□ -0.56
LCOR-209ENST00000540664 BCL9O00512 1426 aa11.54□□□□□ -0.56
LCOR-209ENST00000540664 MED23Q9ULK4 1368 aa11.54□□□□□ -0.56
LCOR-209ENST00000540664 CCDC171Q6TFL3 1326 aa11.54□□□□□ -0.56
LCOR-209ENST00000540664 PTH1RQ03431 593 aa11.54□□□□□ -0.56
LCOR-209ENST00000540664 NECTIN1Q15223 517 aa11.54□□□□□ -0.56
LCOR-209ENST00000540664 ATG3Q9NT62 314 aa11.54□□□□□ -0.56
LCOR-209ENST00000540664 ATG9AQ7Z3C6 839 aa11.54□□□□□ -0.56
LCOR-209ENST00000540664 TM6SF1Q9BZW5 370 aa11.54□□□□□ -0.56
LCOR-209ENST00000540664 GPR108Q9NPR9 543 aa11.54□□□□□ -0.56
LCOR-209ENST00000540664 ASAP1Q9ULH1 1129 aa11.54□□□□□ -0.56
LCOR-209ENST00000540664 NMIQ13287 307 aaPredicted RBP11.53□□□□□ -0.56
LCOR-209ENST00000540664 L1TD1Q5T7N2 865 aaKnown RBP11.53□□□□□ -0.56
LCOR-209ENST00000540664 MAP4K1Q92918 833 aa11.53□□□□□ -0.56
LCOR-209ENST00000540664 BOLA2Q9H3K6 86 aa11.53□□□□□ -0.56
LCOR-209ENST00000540664 ZBTB3Q9H5J0 574 aa11.53□□□□□ -0.56
LCOR-209ENST00000540664 GOLGA6L22H0YM25 854 aa11.52□□□□□ -0.56
LCOR-209ENST00000540664 BRD1O95696 1058 aa11.52□□□□□ -0.56
LCOR-209ENST00000540664 TCIRG1Q13488 830 aa11.52□□□□□ -0.56
LCOR-209ENST00000540664 DNAJC10Q8IXB1 793 aa11.52□□□□□ -0.56
LCOR-209ENST00000540664 FAM227BQ96M60 508 aa11.52□□□□□ -0.56
LCOR-209ENST00000540664 ISY1Q9ULR0 285 aaKnown RBP11.52□□□□□ -0.57
LCOR-209ENST00000540664 A0A0D9SFI3 127 aa11.51□□□□□ -0.57
LCOR-209ENST00000540664 TOM1O60784 492 aa11.51□□□□□ -0.57
LCOR-209ENST00000540664 CIAO1O76071 339 aa11.51□□□□□ -0.57
LCOR-209ENST00000540664 IL15P40933 162 aaPredicted RBP11.51□□□□□ -0.57
LCOR-209ENST00000540664 PIP4K2BP78356 416 aa11.51□□□□□ -0.57
LCOR-209ENST00000540664 KLHL40Q2TBA0 621 aa11.51□□□□□ -0.57
LCOR-209ENST00000540664 TICAM2Q86XR7 235 aa11.51□□□□□ -0.57
LCOR-209ENST00000540664 HAUS7Q99871 368 aa11.51□□□□□ -0.57
LCOR-209ENST00000540664 FSD1Q9BTV5 496 aa11.51□□□□□ -0.57
LCOR-209ENST00000540664 PLA2G12BQ9BX93 195 aa11.51□□□□□ -0.57
LCOR-209ENST00000540664 ZSWIM6Q9HCJ5 1215 aa11.51□□□□□ -0.57
LCOR-209ENST00000540664 RPAP1Q9BWH6 1393 aaPredicted RBP11.51□□□□□ -0.57
LCOR-209ENST00000540664 ANKRD36CQ5JPF3 1778 aa11.51□□□□□ -0.57
LCOR-209ENST00000540664 GOLGA6L3A6NEY3 463 aa11.51□□□□□ -0.57
LCOR-209ENST00000540664 ADAMTS2O95450 1211 aa11.51□□□□□ -0.57
LCOR-209ENST00000540664 STARD3NLO95772 234 aa11.51□□□□□ -0.57
LCOR-209ENST00000540664 DBNDD2Q9BQY9 259 aa11.51□□□□□ -0.57
LCOR-209ENST00000540664 GZF1Q9H116 711 aaPredicted RBP11.51□□□□□ -0.57
LCOR-209ENST00000540664 LMBRD1Q9NUN5 540 aa11.51□□□□□ -0.57
LCOR-209ENST00000540664 RBM8AQ9Y5S9 174 aaKnown RBP11.51□□□□□ -0.57
LCOR-209ENST00000540664 AK2P54819 239 aa11.5□□□□□ -0.57
LCOR-209ENST00000540664 VPS53Q5VIR6 699 aa11.5□□□□□ -0.57
LCOR-209ENST00000540664 PRPF40BQ6NWY9 871 aaKnown RBP11.5□□□□□ -0.57
LCOR-209ENST00000540664 RUFY3Q7L099 469 aa11.5□□□□□ -0.57
LCOR-209ENST00000540664 SLC4A9Q96Q91 983 aa11.5□□□□□ -0.57
LCOR-209ENST00000540664 ZNF609O15014 1411 aa11.5□□□□□ -0.57
LCOR-209ENST00000540664 NWD2Q9ULI1 1742 aa11.5□□□□□ -0.57
LCOR-209ENST00000540664 SPEF2Q9C093 1822 aa11.5□□□□□ -0.57
LCOR-209ENST00000540664 EYA2O00167 538 aa11.5□□□□□ -0.57
LCOR-209ENST00000540664 PCCAP05165 728 aaPredicted RBP11.5□□□□□ -0.57
LCOR-209ENST00000540664 ADCK5Q3MIX3 580 aa11.5□□□□□ -0.57
LCOR-209ENST00000540664 CREB3L3Q68CJ9 461 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms