RNA–Protein interactions for RNA: ENST00000540440.1

PMFBP1-210, Transcript of polyamine modulated factor 1 binding protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene PMFBP1, Length 407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1-210ENST00000540440 PDGFAP04085 211 aa9.44□□□□□ -0.9
PMFBP1-210ENST00000540440 FAM157BP0CG42 384 aa9.44□□□□□ -0.9
PMFBP1-210ENST00000540440 PCSK2P16519 638 aa9.44□□□□□ -0.9
PMFBP1-210ENST00000540440 MZF1P28698 734 aaPredicted RBP9.44□□□□□ -0.9
PMFBP1-210ENST00000540440 ZNF787Q6DD87 383 aa9.44□□□□□ -0.9
PMFBP1-210ENST00000540440 CMTR1Q8N1G2 835 aaKnown RBP9.44□□□□□ -0.9
PMFBP1-210ENST00000540440 TTC16Q8NEE8 873 aa9.44□□□□□ -0.9
PMFBP1-210ENST00000540440 ABHD17AQ96GS6 310 aa9.44□□□□□ -0.9
PMFBP1-210ENST00000540440 C8orf34Q49A92 452 aa9.43□□□□□ -0.9
PMFBP1-210ENST00000540440 GMCL1Q96IK5 515 aa9.43□□□□□ -0.9
PMFBP1-210ENST00000540440 BNIP3LO60238 219 aa9.42□□□□□ -0.9
PMFBP1-210ENST00000540440 MAPTP10636 758 aaKnown RBP9.42□□□□□ -0.9
PMFBP1-210ENST00000540440 UBAP2LQ14157 1087 aaKnown RBP9.42□□□□□ -0.9
PMFBP1-210ENST00000540440 FOXR1Q6PIV2 292 aa9.42□□□□□ -0.9
PMFBP1-210ENST00000540440 ZSCAN29Q8IWY8 852 aaPredicted RBP9.42□□□□□ -0.9
PMFBP1-210ENST00000540440 TRERF1Q96PN7 1200 aa9.42□□□□□ -0.9
PMFBP1-210ENST00000540440 A6NHS1 94 aa9.41□□□□□ -0.9
PMFBP1-210ENST00000540440 TNP2Q05952 138 aa9.41□□□□□ -0.9
PMFBP1-210ENST00000540440 SFSWAPQ12872 951 aaKnown RBP9.41□□□□□ -0.9
PMFBP1-210ENST00000540440 SV2AQ7L0J3 742 aa9.41□□□□□ -0.9
PMFBP1-210ENST00000540440 TMC7Q7Z402 723 aa9.41□□□□□ -0.9
PMFBP1-210ENST00000540440 RBCK1Q9BYM8 510 aa9.41□□□□□ -0.9
PMFBP1-210ENST00000540440 NXF1Q9UBU9 619 aaKnown RBP9.41□□□□□ -0.9
PMFBP1-210ENST00000540440 ANKRD33BA6NCL7 494 aa9.4□□□□□ -0.9
PMFBP1-210ENST00000540440 UBAP1LF5GYI3 381 aa9.4□□□□□ -0.9
PMFBP1-210ENST00000540440 EFSO43281 561 aa9.4□□□□□ -0.9
PMFBP1-210ENST00000540440 CD33P20138 364 aa9.4□□□□□ -0.9
PMFBP1-210ENST00000540440 GRNP28799 593 aaKnown RBP9.4□□□□□ -0.9
PMFBP1-210ENST00000540440 USP5P45974 858 aa9.4□□□□□ -0.9
PMFBP1-210ENST00000540440 TRIP4Q15650 581 aaPredicted RBP9.4□□□□□ -0.9
PMFBP1-210ENST00000540440 DNAJC14Q6Y2X3 702 aaPredicted RBP9.4□□□□□ -0.9
PMFBP1-210ENST00000540440 GJD3Q8N144 294 aa9.4□□□□□ -0.9
PMFBP1-210ENST00000540440 ASB16Q96NS5 453 aa9.4□□□□□ -0.9
PMFBP1-210ENST00000540440 STRN4Q9NRL3 753 aa9.4□□□□□ -0.9
PMFBP1-210ENST00000540440 PHF24Q9UPV7 400 aa9.4□□□□□ -0.9
PMFBP1-210ENST00000540440 KCNH4Q9UQ05 1017 aa9.4□□□□□ -0.9
PMFBP1-210ENST00000540440 GRIN2CQ14957 1233 aa9.39□□□□□ -0.91
PMFBP1-210ENST00000540440 NDFIP2Q9NV92 336 aa9.39□□□□□ -0.91
PMFBP1-210ENST00000540440 ATXN7L1Q9ULK2 861 aaPredicted RBP9.39□□□□□ -0.91
PMFBP1-210ENST00000540440 XYLBO75191 536 aa9.38□□□□□ -0.91
PMFBP1-210ENST00000540440 FGFR3P22607 806 aa9.38□□□□□ -0.91
PMFBP1-210ENST00000540440 PDE3BQ13370 1112 aa9.38□□□□□ -0.91
PMFBP1-210ENST00000540440 KRT25Q7Z3Z0 450 aa9.38□□□□□ -0.91
PMFBP1-210ENST00000540440 FOXD4L4Q8WXT5 416 aaPredicted RBP9.38□□□□□ -0.91
PMFBP1-210ENST00000540440 CITED4Q96RK1 184 aa9.38□□□□□ -0.91
PMFBP1-210ENST00000540440 GGNBP2Q9H3C7 697 aa9.38□□□□□ -0.91
PMFBP1-210ENST00000540440 MARK1Q9P0L2 795 aa9.38□□□□□ -0.91
PMFBP1-210ENST00000540440 FNDC3AQ9Y2H6 1198 aaKnown RBP9.38□□□□□ -0.91
PMFBP1-210ENST00000540440 KCNMB2Q9Y691 235 aa9.38□□□□□ -0.91
PMFBP1-210ENST00000540440 GPR182O15218 404 aa9.37□□□□□ -0.91
PMFBP1-210ENST00000540440 RPLP1P05386 114 aaKnown RBP9.37□□□□□ -0.91
PMFBP1-210ENST00000540440 ZNF438Q7Z4V0 828 aa9.37□□□□□ -0.91
PMFBP1-210ENST00000540440 FAM129BQ96TA1 746 aa9.37□□□□□ -0.91
PMFBP1-210ENST00000540440 H3BM21 787 aa9.36□□□□□ -0.91
PMFBP1-210ENST00000540440 KCNQ4P56696 695 aa9.36□□□□□ -0.91
PMFBP1-210ENST00000540440 LAMC2Q13753 1193 aa9.36□□□□□ -0.91
PMFBP1-210ENST00000540440 RAB44Q7Z6P3 723 aaPredicted RBP9.36□□□□□ -0.91
PMFBP1-210ENST00000540440 RGS22Q8NE09 1264 aa9.36□□□□□ -0.91
PMFBP1-210ENST00000540440 NANOS1Q8WY41 292 aaKnown RBP9.36□□□□□ -0.91
PMFBP1-210ENST00000540440 HCN2Q9UL51 889 aa9.36□□□□□ -0.91
PMFBP1-210ENST00000540440 EHHADHQ08426 723 aa9.35□□□□□ -0.91
PMFBP1-210ENST00000540440 SPEM2Q0P670 501 aa9.35□□□□□ -0.91
PMFBP1-210ENST00000540440 DMRTB1Q96MA1 342 aa9.35□□□□□ -0.91
PMFBP1-210ENST00000540440 PNMA5Q96PV4 448 aa9.35□□□□□ -0.91
PMFBP1-210ENST00000540440 CFHR5Q9BXR6 569 aa9.35□□□□□ -0.91
PMFBP1-210ENST00000540440 SASH3O75995 380 aa9.34□□□□□ -0.91
PMFBP1-210ENST00000540440 CCINQ13939 588 aa9.34□□□□□ -0.91
PMFBP1-210ENST00000540440 NPAS4Q8IUM7 802 aa9.34□□□□□ -0.91
PMFBP1-210ENST00000540440 SLC30A3Q99726 388 aa9.34□□□□□ -0.91
PMFBP1-210ENST00000540440 NIF3L1Q9GZT8 377 aa9.34□□□□□ -0.91
PMFBP1-210ENST00000540440 ERCC3P19447 782 aa9.33□□□□□ -0.92
PMFBP1-210ENST00000540440 NFKB1P19838 968 aa9.33□□□□□ -0.92
PMFBP1-210ENST00000540440 MAPK8P45983 427 aa9.33□□□□□ -0.92
PMFBP1-210ENST00000540440 CTBSQ01459 385 aa9.33□□□□□ -0.92
PMFBP1-210ENST00000540440 BHMTQ93088 406 aa9.33□□□□□ -0.92
PMFBP1-210ENST00000540440 ELP3Q9H9T3 547 aa9.33□□□□□ -0.92
PMFBP1-210ENST00000540440 TERTO14746 1132 aaKnown RBP9.32□□□□□ -0.92
PMFBP1-210ENST00000540440 TREHO43280 583 aa9.32□□□□□ -0.92
PMFBP1-210ENST00000540440 BMP4P12644 408 aa9.32□□□□□ -0.92
PMFBP1-210ENST00000540440 PDE12Q6L8Q7 609 aaKnown RBP9.32□□□□□ -0.92
PMFBP1-210ENST00000540440 NPAS3Q8IXF0 933 aa9.32□□□□□ -0.92
PMFBP1-210ENST00000540440 GPR161Q8N6U8 529 aaKnown RBP9.32□□□□□ -0.92
PMFBP1-210ENST00000540440 SLC16A10Q8TF71 515 aa9.32□□□□□ -0.92
PMFBP1-210ENST00000540440 GSX2Q9BZM3 304 aa9.32□□□□□ -0.92
PMFBP1-210ENST00000540440 TMEM63CQ9P1W3 806 aa9.32□□□□□ -0.92
PMFBP1-210ENST00000540440 PRR12Q9ULL5 1215 aa9.32□□□□□ -0.92
PMFBP1-210ENST00000540440 IGHA2P01877 340 aa9.31□□□□□ -0.92
PMFBP1-210ENST00000540440 P4HBP07237 508 aaKnown RBP9.31□□□□□ -0.92
PMFBP1-210ENST00000540440 RARAP10276 462 aa9.31□□□□□ -0.92
PMFBP1-210ENST00000540440 MX2P20592 715 aa9.31□□□□□ -0.92
PMFBP1-210ENST00000540440 TARSP26639 723 aaKnown RBP9.31□□□□□ -0.92
PMFBP1-210ENST00000540440 PLCB3Q01970 1234 aa9.31□□□□□ -0.92
PMFBP1-210ENST00000540440 ORC1Q13415 861 aa9.31□□□□□ -0.92
PMFBP1-210ENST00000540440 GAS6Q14393 721 aa9.31□□□□□ -0.92
PMFBP1-210ENST00000540440 NLRP13Q86W25 1043 aa9.31□□□□□ -0.92
PMFBP1-210ENST00000540440 FOXD3Q9UJU5 478 aaPredicted RBP9.31□□□□□ -0.92
PMFBP1-210ENST00000540440 ERBB4Q15303 1308 aa9.31□□□□□ -0.92
PMFBP1-210ENST00000540440 TNFRSF21O75509 655 aa9.3□□□□□ -0.92
PMFBP1-210ENST00000540440 EGFRP00533 1210 aa9.3□□□□□ -0.92
PMFBP1-210ENST00000540440 NEUROD1Q13562 356 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms