RNA–Protein interactions for RNA: ENST00000540313.1

RTL9-203, Transcript of retrotransposon Gag like 9, humanhuman

APPRIS P2 TSL 2 BASIC

Gene RTL9, Length 5,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9-203ENST00000540313 ERCC6L2Q5T890 1561 aa7.6□□□□□ -1.19
RTL9-203ENST00000540313 MCM3P25205 808 aa7.6□□□□□ -1.19
RTL9-203ENST00000540313 RAB3GAP1Q15042 981 aa7.6□□□□□ -1.19
RTL9-203ENST00000540313 JAKMIP3Q5VZ66 844 aa7.6□□□□□ -1.19
RTL9-203ENST00000540313 DZIP1Q86YF9 867 aaKnown RBP7.6□□□□□ -1.19
RTL9-203ENST00000540313 USP21Q9UK80 565 aa7.6□□□□□ -1.19
RTL9-203ENST00000540313 F6X3S4 739 aa7.6□□□□□ -1.19
RTL9-203ENST00000540313 PTCD1O75127 700 aaKnown RBP7.6□□□□□ -1.19
RTL9-203ENST00000540313 CAVIN2O95810 425 aa7.6□□□□□ -1.19
RTL9-203ENST00000540313 HMGB1P09429 215 aaKnown RBP7.6□□□□□ -1.19
RTL9-203ENST00000540313 GTF2F1P35269 517 aaKnown RBP eCLIP7.6□□□□□ -1.19
RTL9-203ENST00000540313 EIF5P55010 431 aaKnown RBP7.6□□□□□ -1.19
RTL9-203ENST00000540313 SNW1Q13573 536 aaKnown RBP7.6□□□□□ -1.19
RTL9-203ENST00000540313 BMS1Q14692 1282 aaKnown RBP7.6□□□□□ -1.19
RTL9-203ENST00000540313 KIF4BQ2VIQ3 1234 aa7.6□□□□□ -1.19
RTL9-203ENST00000540313 CCDC152Q4G0S7 254 aa7.6□□□□□ -1.19
RTL9-203ENST00000540313 HOOK2Q96ED9 719 aa7.6□□□□□ -1.19
RTL9-203ENST00000540313 C6orf229H3BNL8 230 aa7.6□□□□□ -1.19
RTL9-203ENST00000540313 SNRPA1P09661 255 aaKnown RBP7.6□□□□□ -1.19
RTL9-203ENST00000540313 SYCP1Q15431 976 aa7.6□□□□□ -1.19
RTL9-203ENST00000540313 TMC6Q7Z403 805 aa7.6□□□□□ -1.19
RTL9-203ENST00000540313 SMC5Q8IY18 1101 aa7.6□□□□□ -1.19
RTL9-203ENST00000540313 B4DLN1 442 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 POTEB2H3BUK9 544 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 ZSCAN22P10073 491 aaPredicted RBP7.59□□□□□ -1.19
RTL9-203ENST00000540313 ZNF165P49910 485 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 MRPL12P52815 198 aaKnown RBP7.59□□□□□ -1.19
RTL9-203ENST00000540313 FSIP1Q8NA03 581 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 SUPT20HQ8NEM7 779 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 ZNF830Q96NB3 372 aaPredicted RBP7.59□□□□□ -1.19
RTL9-203ENST00000540313 LARP6Q9BRS8 491 aaKnown RBP7.59□□□□□ -1.19
RTL9-203ENST00000540313 BOLA2Q9H3K6 86 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 CABP5Q9NP86 173 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 CCDC171Q6TFL3 1326 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 HLA-DOAP06340 250 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 USP5P45974 858 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 PPP4R3AQ6IN85 833 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 C8orf76Q96K31 380 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 YEATS2Q9ULM3 1422 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 TRAPPC8Q9Y2L5 1435 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 GIMAP6Q6P9H5 292 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 OGFOD1Q8N543 542 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 PLCD4Q9BRC7 762 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 UBAC1Q9BSL1 405 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 CCDC87Q9NVE4 849 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 DBF4Q9UBU7 674 aaPredicted RBP7.59□□□□□ -1.19
RTL9-203ENST00000540313 TRPC5Q9UL62 973 aaPredicted RBP7.59□□□□□ -1.19
RTL9-203ENST00000540313 BAG3O95817 575 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 KRT222Q8N1A0 295 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 CCDC150Q8NCX0 1101 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 ARHGAP45Q92619 1136 aa7.59□□□□□ -1.19
RTL9-203ENST00000540313 ASXL1Q8IXJ9 1541 aa7.59□□□□□ -1.2
RTL9-203ENST00000540313 POLR3DP05423 398 aaPredicted RBP7.58□□□□□ -1.2
RTL9-203ENST00000540313 ZNF397Q8NF99 534 aaPredicted RBP7.58□□□□□ -1.2
RTL9-203ENST00000540313 TFIP11Q9UBB9 837 aaKnown RBP7.58□□□□□ -1.2
RTL9-203ENST00000540313 SDSP20132 328 aa7.58□□□□□ -1.2
RTL9-203ENST00000540313 PDE6BP35913 854 aa7.58□□□□□ -1.2
RTL9-203ENST00000540313 GUCY1B3Q02153 619 aa7.58□□□□□ -1.2
RTL9-203ENST00000540313 USP48Q86UV5 1035 aa7.58□□□□□ -1.2
RTL9-203ENST00000540313 TAF4BQ92750 862 aa7.58□□□□□ -1.2
RTL9-203ENST00000540313 EVI5LQ96CN4 794 aa7.58□□□□□ -1.2
RTL9-203ENST00000540313 RBM17Q96I25 401 aaKnown RBP7.58□□□□□ -1.2
RTL9-203ENST00000540313 TRERF1Q96PN7 1200 aa7.58□□□□□ -1.2
RTL9-203ENST00000540313 ATP7AQ04656 1500 aa7.58□□□□□ -1.2
RTL9-203ENST00000540313 SHROOM2Q13796 1616 aa7.58□□□□□ -1.2
RTL9-203ENST00000540313 ADGRF5Q8IZF2 1346 aa7.58□□□□□ -1.2
RTL9-203ENST00000540313 GOLGA6L9A6NEM1 432 aa7.58□□□□□ -1.2
RTL9-203ENST00000540313 TDO2P48775 406 aa7.58□□□□□ -1.2
RTL9-203ENST00000540313 PRIM1P49642 420 aaKnown RBP7.58□□□□□ -1.2
RTL9-203ENST00000540313 MBIPQ9NS73 344 aa7.58□□□□□ -1.2
RTL9-203ENST00000540313 PPIP5K1Q6PFW1 1433 aa7.58□□□□□ -1.2
RTL9-203ENST00000540313 EIF2AK4Q9P2K8 1649 aaKnown RBP7.58□□□□□ -1.2
RTL9-203ENST00000540313 RXRBP28702 533 aa7.58□□□□□ -1.2
RTL9-203ENST00000540313 TTF1Q15361 905 aaPredicted RBP7.58□□□□□ -1.2
RTL9-203ENST00000540313 TRAPPC3LQ5T215 181 aa7.58□□□□□ -1.2
RTL9-203ENST00000540313 TPTE2Q6XPS3 522 aa7.58□□□□□ -1.2
RTL9-203ENST00000540313 NME9Q86XW9 330 aa7.58□□□□□ -1.2
RTL9-203ENST00000540313 TMEM87AQ8NBN3 555 aa7.58□□□□□ -1.2
RTL9-203ENST00000540313 CCDC94Q9BW85 323 aaPredicted RBP7.58□□□□□ -1.2
RTL9-203ENST00000540313 ABCA8O94911 1581 aa7.58□□□□□ -1.2
RTL9-203ENST00000540313 TNNI2P48788 182 aa7.57□□□□□ -1.2
RTL9-203ENST00000540313 MAP3K12Q12852 859 aa7.57□□□□□ -1.2
RTL9-203ENST00000540313 ZRSR2Q15696 482 aaKnown RBP7.57□□□□□ -1.2
RTL9-203ENST00000540313 CCDC178Q5BJE1 867 aa7.57□□□□□ -1.2
RTL9-203ENST00000540313 GIMAP7Q8NHV1 300 aa7.57□□□□□ -1.2
RTL9-203ENST00000540313 CUL5Q93034 780 aa7.57□□□□□ -1.2
RTL9-203ENST00000540313 FAM107BQ9H098 131 aa7.57□□□□□ -1.2
RTL9-203ENST00000540313 CNPY2Q9Y2B0 182 aa7.57□□□□□ -1.2
RTL9-203ENST00000540313 EMILIN1Q9Y6C2 1016 aa7.57□□□□□ -1.2
RTL9-203ENST00000540313 PTPRKQ15262 1439 aa7.57□□□□□ -1.2
RTL9-203ENST00000540313 DESP17661 470 aa7.57□□□□□ -1.2
RTL9-203ENST00000540313 SPA17Q15506 151 aa7.57□□□□□ -1.2
RTL9-203ENST00000540313 TIGD1Q96MW7 591 aa7.57□□□□□ -1.2
RTL9-203ENST00000540313 NLRP3Q96P20 1036 aa7.57□□□□□ -1.2
RTL9-203ENST00000540313 SLAIN2Q9P270 581 aa7.57□□□□□ -1.2
RTL9-203ENST00000540313 TAX1BP1Q86VP1 789 aa7.57□□□□□ -1.2
RTL9-203ENST00000540313 FAM200AQ8TCP9 573 aa7.57□□□□□ -1.2
RTL9-203ENST00000540313 TMX1Q9H3N1 280 aa7.57□□□□□ -1.2
RTL9-203ENST00000540313 CWC25Q9NXE8 425 aaPredicted RBP7.57□□□□□ -1.2
RTL9-203ENST00000540313 ANAPC15P60006 121 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms