RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 NPR1P16066 1061 aa17.2■□□□□ 0.34
CCDC130-202ENST00000540216 ERFEQ4G0M1 354 aa17.2■□□□□ 0.34
CCDC130-202ENST00000540216 ARHGAP27Q6ZUM4 889 aa17.2■□□□□ 0.34
CCDC130-202ENST00000540216 RIC3Q7Z5B4 369 aa17.2■□□□□ 0.34
CCDC130-202ENST00000540216 NUTM1Q86Y26 1132 aa17.2■□□□□ 0.34
CCDC130-202ENST00000540216 TNRC6CQ9HCJ0 1690 aaKnown RBP17.2■□□□□ 0.34
CCDC130-202ENST00000540216 TRIM28Q13263 835 aaKnown RBP17.19■□□□□ 0.34
CCDC130-202ENST00000540216 CRY2Q49AN0 593 aa17.19■□□□□ 0.34
CCDC130-202ENST00000540216 ISCA1Q9BUE6 129 aa17.19■□□□□ 0.34
CCDC130-202ENST00000540216 SLC10A5Q5PT55 438 aa17.18■□□□□ 0.34
CCDC130-202ENST00000540216 SLC4A2P04920 1241 aa17.17■□□□□ 0.34
CCDC130-202ENST00000540216 SOGA3Q5TF21 947 aa17.17■□□□□ 0.34
CCDC130-202ENST00000540216 PRPF40BQ6NWY9 871 aaKnown RBP17.17■□□□□ 0.34
CCDC130-202ENST00000540216 TRMT112Q9UI30 125 aaKnown RBP17.17■□□□□ 0.34
CCDC130-202ENST00000540216 SH3TC1Q8TE82 1336 aa17.17■□□□□ 0.34
CCDC130-202ENST00000540216 ADCY9O60503 1353 aa17.16■□□□□ 0.34
CCDC130-202ENST00000540216 ALDH1B1P30837 517 aa17.16■□□□□ 0.34
CCDC130-202ENST00000540216 KSR2Q6VAB6 950 aa17.16■□□□□ 0.34
CCDC130-202ENST00000540216 NLRP3Q96P20 1036 aa17.16■□□□□ 0.34
CCDC130-202ENST00000540216 METTL22Q9BUU2 404 aaPredicted RBP17.16■□□□□ 0.34
CCDC130-202ENST00000540216 ATP5J2-PTCD1G3V325 749 aa17.15■□□□□ 0.34
CCDC130-202ENST00000540216 TCERG1O14776 1098 aaKnown RBP17.15■□□□□ 0.34
CCDC130-202ENST00000540216 HOXA10P31260 410 aaPredicted RBP17.15■□□□□ 0.34
CCDC130-202ENST00000540216 SLFN5Q08AF3 891 aa17.15■□□□□ 0.34
CCDC130-202ENST00000540216 RPGRQ92834 1020 aaKnown RBP17.15■□□□□ 0.34
CCDC130-202ENST00000540216 MAP3K2Q9Y2U5 619 aa17.15■□□□□ 0.34
CCDC130-202ENST00000540216 SLX4Q8IY92 1834 aa17.14■□□□□ 0.34
CCDC130-202ENST00000540216 UTRNP46939 3433 aa17.14■□□□□ 0.33
CCDC130-202ENST00000540216 PI4KAP2A4QPH2 592 aa17.14■□□□□ 0.33
CCDC130-202ENST00000540216 NEXNQ0ZGT2 675 aa17.14■□□□□ 0.33
CCDC130-202ENST00000540216 FLIIQ13045 1269 aa17.14■□□□□ 0.33
CCDC130-202ENST00000540216 PI4KAP1Q8N8J0 262 aa17.14■□□□□ 0.33
CCDC130-202ENST00000540216 CCDC191Q8NCU4 936 aa17.14■□□□□ 0.33
CCDC130-202ENST00000540216 ZNF428Q96B54 188 aa17.14■□□□□ 0.33
CCDC130-202ENST00000540216 MYD88Q99836 296 aa17.14■□□□□ 0.33
CCDC130-202ENST00000540216 CACNA1SQ13698 1873 aa17.14■□□□□ 0.33
CCDC130-202ENST00000540216 C21orf2O43822 256 aa17.13■□□□□ 0.33
CCDC130-202ENST00000540216 HSP90B1P14625 803 aaKnown RBP17.13■□□□□ 0.33
CCDC130-202ENST00000540216 G2E3Q7L622 706 aa17.13■□□□□ 0.33
CCDC130-202ENST00000540216 ZNF784Q8NCA9 323 aaPredicted RBP17.13■□□□□ 0.33
CCDC130-202ENST00000540216 CRAMP1Q96RY5 1269 aa17.13■□□□□ 0.33
CCDC130-202ENST00000540216 FKBP5Q13451 457 aaPredicted RBP17.12■□□□□ 0.33
CCDC130-202ENST00000540216 ZBTB38Q8NAP3 1195 aaPredicted RBP17.12■□□□□ 0.33
CCDC130-202ENST00000540216 RBM17Q96I25 401 aaKnown RBP17.12■□□□□ 0.33
CCDC130-202ENST00000540216 CWC25Q9NXE8 425 aaPredicted RBP17.12■□□□□ 0.33
CCDC130-202ENST00000540216 LTBP3Q9NS15 1303 aa17.12■□□□□ 0.33
CCDC130-202ENST00000540216 LAMB2P55268 1798 aa17.12■□□□□ 0.33
CCDC130-202ENST00000540216 FER1L6Q2WGJ9 1857 aa17.12■□□□□ 0.33
CCDC130-202ENST00000540216 CCDC93Q567U6 631 aa17.11■□□□□ 0.33
CCDC130-202ENST00000540216 TRMT2AQ8IZ69 625 aaKnown RBP17.11■□□□□ 0.33
CCDC130-202ENST00000540216 C7orf43Q8WVR3 580 aa17.11■□□□□ 0.33
CCDC130-202ENST00000540216 DDX60Q8IY21 1712 aaKnown RBP17.1■□□□□ 0.33
CCDC130-202ENST00000540216 PCCAP05165 728 aaPredicted RBP17.1■□□□□ 0.33
CCDC130-202ENST00000540216 CT47B1P0C2W7 299 aaPredicted RBP17.1■□□□□ 0.33
CCDC130-202ENST00000540216 HCLS1P14317 486 aaPredicted RBP17.1■□□□□ 0.33
CCDC130-202ENST00000540216 LMNB1P20700 586 aa17.1■□□□□ 0.33
CCDC130-202ENST00000540216 C9orf131Q5VYM1 1079 aa17.1■□□□□ 0.33
CCDC130-202ENST00000540216 CC2D2BQ6DHV5 1058 aa17.1■□□□□ 0.33
CCDC130-202ENST00000540216 C3orf67Q6ZVT6 689 aa17.1■□□□□ 0.33
CCDC130-202ENST00000540216 SYNE4Q8N205 404 aa17.1■□□□□ 0.33
CCDC130-202ENST00000540216 FAM89AQ96GI7 184 aa17.1■□□□□ 0.33
CCDC130-202ENST00000540216 CDCA7LQ96GN5 454 aa17.1■□□□□ 0.33
CCDC130-202ENST00000540216 TAOK3Q9H2K8 898 aa17.1■□□□□ 0.33
CCDC130-202ENST00000540216 ZC3H4Q9UPT8 1303 aaKnown RBP17.1■□□□□ 0.33
CCDC130-202ENST00000540216 SBF1O95248 1867 aa17.1■□□□□ 0.33
CCDC130-202ENST00000540216 NFKBIEO00221 500 aa17.09■□□□□ 0.33
CCDC130-202ENST00000540216 IRS4O14654 1257 aaPredicted RBP17.09■□□□□ 0.33
CCDC130-202ENST00000540216 RASSF7Q02833 373 aa17.09■□□□□ 0.33
CCDC130-202ENST00000540216 GRIPAP1Q4V328 841 aa17.09■□□□□ 0.33
CCDC130-202ENST00000540216 RTKN2Q8IZC4 609 aa17.09■□□□□ 0.33
CCDC130-202ENST00000540216 DNAAF4Q8WXU2 420 aa17.09■□□□□ 0.33
CCDC130-202ENST00000540216 RNF181Q9P0P0 153 aa17.09■□□□□ 0.33
CCDC130-202ENST00000540216 ZNF219Q9P2Y4 722 aaPredicted RBP17.09■□□□□ 0.33
CCDC130-202ENST00000540216 IGKV5-2P06315 115 aa17.08■□□□□ 0.32
CCDC130-202ENST00000540216 CDHR2Q9BYE9 1310 aa17.07■□□□□ 0.32
CCDC130-202ENST00000540216 NEURL1BA8MQ27 555 aa17.07■□□□□ 0.32
CCDC130-202ENST00000540216 SF3B3Q15393 1217 aaKnown RBP17.07■□□□□ 0.32
CCDC130-202ENST00000540216 DDX46Q7L014 1031 aaKnown RBP17.07■□□□□ 0.32
CCDC130-202ENST00000540216 LINS1Q8NG48 757 aa17.07■□□□□ 0.32
CCDC130-202ENST00000540216 ABCC4O15439 1325 aa17.06■□□□□ 0.32
CCDC130-202ENST00000540216 PPEF1O14829 653 aaPredicted RBP17.06■□□□□ 0.32
CCDC130-202ENST00000540216 HNRNPUQ00839 825 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCDC130-202ENST00000540216 SNED1Q8TER0 1413 aa17.05■□□□□ 0.32
CCDC130-202ENST00000540216 BBOX1O75936 387 aa17.05■□□□□ 0.32
CCDC130-202ENST00000540216 FKBP4Q02790 459 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCDC130-202ENST00000540216 CWF19L2Q2TBE0 894 aaKnown RBP17.05■□□□□ 0.32
CCDC130-202ENST00000540216 ALDH1L2Q3SY69 923 aa17.05■□□□□ 0.32
CCDC130-202ENST00000540216 RTL5Q5HYW3 569 aaPredicted RBP17.05■□□□□ 0.32
CCDC130-202ENST00000540216 TMC4Q7Z404 712 aa17.05■□□□□ 0.32
CCDC130-202ENST00000540216 TMX4Q9H1E5 349 aaPredicted RBP17.05■□□□□ 0.32
CCDC130-202ENST00000540216 TIAM2Q8IVF5 1701 aa17.04■□□□□ 0.32
CCDC130-202ENST00000540216 PTPRCP08575 1304 aa17.04■□□□□ 0.32
CCDC130-202ENST00000540216 PDE8AO60658 829 aa17.04■□□□□ 0.32
CCDC130-202ENST00000540216 GRAPQ13588 217 aa17.04■□□□□ 0.32
CCDC130-202ENST00000540216 GCKRQ14397 625 aa17.04■□□□□ 0.32
CCDC130-202ENST00000540216 GRAPLQ8TC17 118 aaPredicted RBP17.04■□□□□ 0.32
CCDC130-202ENST00000540216 PSMD1Q99460 953 aa17.04■□□□□ 0.32
CCDC130-202ENST00000540216 GPBP1L1Q9HC44 474 aaPredicted RBP17.04■□□□□ 0.32
CCDC130-202ENST00000540216 ATP6V0A2Q9Y487 856 aa17.04■□□□□ 0.32
CCDC130-202ENST00000540216 DICER1Q9UPY3 1922 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms