RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 RGPD8O14715 1765 aaPredicted RBP10.37□□□□□ -0.75
DDB1-217ENST00000540166 CYP27B1O15528 508 aa10.37□□□□□ -0.75
DDB1-217ENST00000540166 HTATSF1O43719 755 aaKnown RBP10.37□□□□□ -0.75
DDB1-217ENST00000540166 PIBF1Q8WXW3 757 aa10.37□□□□□ -0.75
DDB1-217ENST00000540166 CCDC112Q8NEF3 446 aa10.36□□□□□ -0.75
DDB1-217ENST00000540166 TSPYL1Q9H0U9 437 aa10.36□□□□□ -0.75
DDB1-217ENST00000540166 ST5P78524 1137 aa10.36□□□□□ -0.75
DDB1-217ENST00000540166 GCC1Q96CN9 775 aa10.36□□□□□ -0.75
DDB1-217ENST00000540166 SETDB2Q96T68 719 aa10.36□□□□□ -0.75
DDB1-217ENST00000540166 LMBRD1Q9NUN5 540 aa10.36□□□□□ -0.75
DDB1-217ENST00000540166 ADCY5O95622 1261 aa10.36□□□□□ -0.75
DDB1-217ENST00000540166 ATP2B3Q16720 1220 aa10.36□□□□□ -0.75
DDB1-217ENST00000540166 BMP2KLQ5H9B9 411 aa10.36□□□□□ -0.75
DDB1-217ENST00000540166 PDLIM2Q96JY6 352 aa10.36□□□□□ -0.75
DDB1-217ENST00000540166 TNS2Q63HR2 1409 aa10.36□□□□□ -0.75
DDB1-217ENST00000540166 REC8O95072 547 aa10.35□□□□□ -0.75
DDB1-217ENST00000540166 INTS3Q68E01 1043 aaKnown RBP10.35□□□□□ -0.75
DDB1-217ENST00000540166 THUMPD2Q9BTF0 503 aaKnown RBP10.35□□□□□ -0.75
DDB1-217ENST00000540166 TSPYL4Q9UJ04 414 aa10.35□□□□□ -0.75
DDB1-217ENST00000540166 GIGYF1O75420 1035 aaPredicted RBP10.35□□□□□ -0.75
DDB1-217ENST00000540166 TEX35Q5T0J7 233 aa10.35□□□□□ -0.75
DDB1-217ENST00000540166 ARHGEF28Q8N1W1 1705 aaKnown RBP10.35□□□□□ -0.75
DDB1-217ENST00000540166 TBC1D9Q6ZT07 1266 aa10.35□□□□□ -0.75
DDB1-217ENST00000540166 C17orf53Q8N3J3 647 aaPredicted RBP10.35□□□□□ -0.75
DDB1-217ENST00000540166 KIAA1210Q9ULL0 1709 aa10.34□□□□□ -0.75
DDB1-217ENST00000540166 GOLGA6L4A6NEF3 574 aa10.34□□□□□ -0.75
DDB1-217ENST00000540166 H0YIN7 160 aa10.34□□□□□ -0.75
DDB1-217ENST00000540166 GABPB1Q06547 395 aaPredicted RBP10.34□□□□□ -0.75
DDB1-217ENST00000540166 DNAJC10Q8IXB1 793 aa10.34□□□□□ -0.75
DDB1-217ENST00000540166 JARID2Q92833 1246 aaPredicted RBP10.34□□□□□ -0.75
DDB1-217ENST00000540166 APPP05067 770 aa10.34□□□□□ -0.75
DDB1-217ENST00000540166 NBPF5PQ86XG9 351 aaPredicted RBP10.34□□□□□ -0.75
DDB1-217ENST00000540166 NUCB1Q02818 461 aa10.34□□□□□ -0.75
DDB1-217ENST00000540166 COL23A1Q86Y22 540 aaPredicted RBP10.34□□□□□ -0.75
DDB1-217ENST00000540166 NECTIN2Q92692 538 aa10.33□□□□□ -0.76
DDB1-217ENST00000540166 ZBTB40Q9NUA8 1239 aa10.33□□□□□ -0.76
DDB1-217ENST00000540166 TBC1D2BQ9UPU7 963 aa10.33□□□□□ -0.76
DDB1-217ENST00000540166 RIOK3O14730 519 aaKnown RBP10.33□□□□□ -0.76
DDB1-217ENST00000540166 GNAI1P63096 354 aa10.33□□□□□ -0.76
DDB1-217ENST00000540166 TPD52L1Q16890 204 aaPredicted RBP10.33□□□□□ -0.76
DDB1-217ENST00000540166 API5Q9BZZ5 524 aaKnown RBP10.33□□□□□ -0.76
DDB1-217ENST00000540166 RNMTO43148 476 aaKnown RBP10.33□□□□□ -0.76
DDB1-217ENST00000540166 NEK4P51957 841 aa10.33□□□□□ -0.76
DDB1-217ENST00000540166 AIMP1Q12904 312 aaKnown RBP10.33□□□□□ -0.76
DDB1-217ENST00000540166 UVSSAQ2YD98 709 aa10.33□□□□□ -0.76
DDB1-217ENST00000540166 SLC4A10Q6U841 1118 aa10.33□□□□□ -0.76
DDB1-217ENST00000540166 KRT222Q8N1A0 295 aa10.33□□□□□ -0.76
DDB1-217ENST00000540166 TMEM63CQ9P1W3 806 aa10.33□□□□□ -0.76
DDB1-217ENST00000540166 GLI3P10071 1580 aa10.32□□□□□ -0.76
DDB1-217ENST00000540166 TRIM6-TRIM34B2RNG4 842 aa10.32□□□□□ -0.76
DDB1-217ENST00000540166 ZBTB22O15209 634 aa10.32□□□□□ -0.76
DDB1-217ENST00000540166 DPY19L2Q6NUT2 758 aa10.32□□□□□ -0.76
DDB1-217ENST00000540166 TRIM34Q9BYJ4 488 aa10.32□□□□□ -0.76
DDB1-217ENST00000540166 CLEC11AQ9Y240 323 aa10.32□□□□□ -0.76
DDB1-217ENST00000540166 TMEM51Q9NW97 253 aa10.32□□□□□ -0.76
DDB1-217ENST00000540166 RPS6KA4O75676 772 aa10.32□□□□□ -0.76
DDB1-217ENST00000540166 MYL6BP14649 208 aa10.32□□□□□ -0.76
DDB1-217ENST00000540166 ADRA2BP18089 450 aa10.32□□□□□ -0.76
DDB1-217ENST00000540166 CRKLP46109 303 aaKnown RBP10.32□□□□□ -0.76
DDB1-217ENST00000540166 ZNF827Q17R98 1081 aa10.32□□□□□ -0.76
DDB1-217ENST00000540166 TWISTNBQ3B726 338 aaPredicted RBP10.32□□□□□ -0.76
DDB1-217ENST00000540166 DALRD3Q5D0E6 543 aaKnown RBP10.32□□□□□ -0.76
DDB1-217ENST00000540166 PIM2Q9P1W9 311 aa10.32□□□□□ -0.76
DDB1-217ENST00000540166 SLC52A2Q9HAB3 445 aa10.31□□□□□ -0.76
DDB1-217ENST00000540166 GPS2Q13227 327 aa10.31□□□□□ -0.76
DDB1-217ENST00000540166 MTHFSDQ2M296 383 aaKnown RBP10.31□□□□□ -0.76
DDB1-217ENST00000540166 GOLGA6L1Q8N7Z2 621 aa10.31□□□□□ -0.76
DDB1-217ENST00000540166 STK31Q9BXU1 1019 aa10.31□□□□□ -0.76
DDB1-217ENST00000540166 CD2BP2O95400 341 aaKnown RBP10.31□□□□□ -0.76
DDB1-217ENST00000540166 ALDH1L2Q3SY69 923 aa10.31□□□□□ -0.76
DDB1-217ENST00000540166 MCM10Q7L590 875 aa10.31□□□□□ -0.76
DDB1-217ENST00000540166 C16orf45Q96MC5 204 aaPredicted RBP10.31□□□□□ -0.76
DDB1-217ENST00000540166 NRDCO43847 1150 aa10.3□□□□□ -0.76
DDB1-217ENST00000540166 SNRPA1P09661 255 aaKnown RBP10.3□□□□□ -0.76
DDB1-217ENST00000540166 RPGRQ92834 1020 aaKnown RBP10.3□□□□□ -0.76
DDB1-217ENST00000540166 ATG3Q9NT62 314 aa10.3□□□□□ -0.76
DDB1-217ENST00000540166 LRRC4BQ9NT99 713 aa10.3□□□□□ -0.76
DDB1-217ENST00000540166 HCLS1P14317 486 aaPredicted RBP10.3□□□□□ -0.76
DDB1-217ENST00000540166 TAF7Q15545 349 aaPredicted RBP10.3□□□□□ -0.76
DDB1-217ENST00000540166 PDGFDQ9GZP0 370 aaPredicted RBP10.3□□□□□ -0.76
DDB1-217ENST00000540166 ATP6V1DQ9Y5K8 247 aa10.3□□□□□ -0.76
DDB1-217ENST00000540166 COL22A1Q8NFW1 1626 aaPredicted RBP10.3□□□□□ -0.76
DDB1-217ENST00000540166 USPL1Q5W0Q7 1092 aa10.3□□□□□ -0.76
DDB1-217ENST00000540166 TPTE2Q6XPS3 522 aa10.3□□□□□ -0.76
DDB1-217ENST00000540166 DZIP3Q86Y13 1208 aaKnown RBP10.3□□□□□ -0.76
DDB1-217ENST00000540166 CNBD1Q8NA66 436 aa10.3□□□□□ -0.76
DDB1-217ENST00000540166 LGR6Q9HBX8 967 aa10.3□□□□□ -0.76
DDB1-217ENST00000540166 TRIM35Q9UPQ4 493 aa10.3□□□□□ -0.76
DDB1-217ENST00000540166 CD2APQ9Y5K6 639 aa10.3□□□□□ -0.76
DDB1-217ENST00000540166 GPT2Q8TD30 523 aa10.29□□□□□ -0.76
DDB1-217ENST00000540166 GDPD2Q9HCC8 539 aa10.29□□□□□ -0.76
DDB1-217ENST00000540166 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.29□□□□□ -0.76
DDB1-217ENST00000540166 TNNT1P13805 278 aa10.29□□□□□ -0.76
DDB1-217ENST00000540166 ZGPATQ8N5A5 531 aaKnown RBP10.29□□□□□ -0.76
DDB1-217ENST00000540166 MCM2P49736 904 aa10.29□□□□□ -0.76
DDB1-217ENST00000540166 C2CD5Q86YS7 1000 aa10.29□□□□□ -0.76
DDB1-217ENST00000540166 PROM2Q8N271 834 aa10.29□□□□□ -0.76
DDB1-217ENST00000540166 ARHGEF1Q92888 912 aaKnown RBP10.29□□□□□ -0.76
DDB1-217ENST00000540166 HMMRO75330 724 aa10.28□□□□□ -0.76
DDB1-217ENST00000540166 SMIM5Q71RC9 77 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms