RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 ISCA1Q9BUE6 129 aa23.55■■□□□ 1.36
SNRPA1-203ENST00000540017 UTP14AQ9BVJ6 771 aaKnown RBP23.55■■□□□ 1.36
SNRPA1-203ENST00000540017 SLC4A2P04920 1241 aa23.54■■□□□ 1.36
SNRPA1-203ENST00000540017 STYK1Q6J9G0 422 aa23.54■■□□□ 1.36
SNRPA1-203ENST00000540017 RIC3Q7Z5B4 369 aa23.54■■□□□ 1.36
SNRPA1-203ENST00000540017 MASTLQ96GX5 879 aa23.54■■□□□ 1.36
SNRPA1-203ENST00000540017 STK31Q9BXU1 1019 aa23.54■■□□□ 1.36
SNRPA1-203ENST00000540017 C3orf67Q6ZVT6 689 aa23.53■■□□□ 1.36
SNRPA1-203ENST00000540017 CDCA7LQ96GN5 454 aa23.53■■□□□ 1.36
SNRPA1-203ENST00000540017 RIC1Q4ADV7 1423 aa23.52■■□□□ 1.36
SNRPA1-203ENST00000540017 SLFN5Q08AF3 891 aa23.52■■□□□ 1.36
SNRPA1-203ENST00000540017 SLX4Q8IY92 1834 aa23.52■■□□□ 1.36
SNRPA1-203ENST00000540017 NPR1P16066 1061 aa23.51■■□□□ 1.35
SNRPA1-203ENST00000540017 CRY2Q49AN0 593 aa23.51■■□□□ 1.35
SNRPA1-203ENST00000540017 E9PSI1 815 aa23.5■■□□□ 1.35
SNRPA1-203ENST00000540017 SLC10A5Q5PT55 438 aa23.5■■□□□ 1.35
SNRPA1-203ENST00000540017 PRPF40BQ6NWY9 871 aaKnown RBP23.5■■□□□ 1.35
SNRPA1-203ENST00000540017 CNKSR1Q969H4 720 aa23.5■■□□□ 1.35
SNRPA1-203ENST00000540017 MYD88Q99836 296 aa23.5■■□□□ 1.35
SNRPA1-203ENST00000540017 ZNF219Q9P2Y4 722 aaPredicted RBP23.5■■□□□ 1.35
SNRPA1-203ENST00000540017 TRMT112Q9UI30 125 aaKnown RBP23.5■■□□□ 1.35
SNRPA1-203ENST00000540017 ADCY9O60503 1353 aa23.5■■□□□ 1.35
SNRPA1-203ENST00000540017 CACNA1SQ13698 1873 aa23.49■■□□□ 1.35
SNRPA1-203ENST00000540017 PI4KAP2A4QPH2 592 aa23.49■■□□□ 1.35
SNRPA1-203ENST00000540017 C21orf2O43822 256 aa23.49■■□□□ 1.35
SNRPA1-203ENST00000540017 TRIM28Q13263 835 aaKnown RBP23.49■■□□□ 1.35
SNRPA1-203ENST00000540017 KSR2Q6VAB6 950 aa23.49■■□□□ 1.35
SNRPA1-203ENST00000540017 PI4KAP1Q8N8J0 262 aa23.49■■□□□ 1.35
SNRPA1-203ENST00000540017 MAP3K2Q9Y2U5 619 aa23.49■■□□□ 1.35
SNRPA1-203ENST00000540017 DDX58O95786 925 aaKnown RBP23.48■■□□□ 1.35
SNRPA1-203ENST00000540017 HCLS1P14317 486 aaPredicted RBP23.48■■□□□ 1.35
SNRPA1-203ENST00000540017 ZNF784Q8NCA9 323 aaPredicted RBP23.48■■□□□ 1.35
SNRPA1-203ENST00000540017 METTL22Q9BUU2 404 aaPredicted RBP23.48■■□□□ 1.35
SNRPA1-203ENST00000540017 RNF123Q5XPI4 1314 aa23.48■■□□□ 1.35
SNRPA1-203ENST00000540017 RASSF7Q02833 373 aa23.47■■□□□ 1.35
SNRPA1-203ENST00000540017 FLIIQ13045 1269 aa23.47■■□□□ 1.35
SNRPA1-203ENST00000540017 TRMT2AQ8IZ69 625 aaKnown RBP23.47■■□□□ 1.35
SNRPA1-203ENST00000540017 FAM89AQ96GI7 184 aa23.47■■□□□ 1.35
SNRPA1-203ENST00000540017 SH3TC1Q8TE82 1336 aa23.46■■□□□ 1.35
SNRPA1-203ENST00000540017 C7orf43Q8WVR3 580 aa23.46■■□□□ 1.35
SNRPA1-203ENST00000540017 NFKBIEO00221 500 aa23.45■■□□□ 1.34
SNRPA1-203ENST00000540017 PRELPP51888 382 aa23.45■■□□□ 1.34
SNRPA1-203ENST00000540017 RTL5Q5HYW3 569 aaPredicted RBP23.45■■□□□ 1.34
SNRPA1-203ENST00000540017 NLRP3Q96P20 1036 aa23.45■■□□□ 1.34
SNRPA1-203ENST00000540017 IGKV5-2P06315 115 aa23.44■■□□□ 1.34
SNRPA1-203ENST00000540017 HOXA10P31260 410 aaPredicted RBP23.44■■□□□ 1.34
SNRPA1-203ENST00000540017 OLFM4Q6UX06 510 aa23.44■■□□□ 1.34
SNRPA1-203ENST00000540017 LAMB2P55268 1798 aa23.44■■□□□ 1.34
SNRPA1-203ENST00000540017 CACNA1FO60840 1977 aa23.43■■□□□ 1.34
SNRPA1-203ENST00000540017 DDX60Q8IY21 1712 aaKnown RBP23.43■■□□□ 1.34
SNRPA1-203ENST00000540017 C9orf131Q5VYM1 1079 aa23.43■■□□□ 1.34
SNRPA1-203ENST00000540017 RPGRQ92834 1020 aaKnown RBP23.43■■□□□ 1.34
SNRPA1-203ENST00000540017 ALDH1B1P30837 517 aa23.42■■□□□ 1.34
SNRPA1-203ENST00000540017 FKBP5Q13451 457 aaPredicted RBP23.42■■□□□ 1.34
SNRPA1-203ENST00000540017 SLC51AQ86UW1 340 aa23.42■■□□□ 1.34
SNRPA1-203ENST00000540017 CCDC191Q8NCU4 936 aa23.42■■□□□ 1.34
SNRPA1-203ENST00000540017 JARID2Q92833 1246 aaPredicted RBP23.42■■□□□ 1.34
SNRPA1-203ENST00000540017 SBF1O95248 1867 aa23.42■■□□□ 1.34
SNRPA1-203ENST00000540017 FER1L6Q2WGJ9 1857 aa23.41■■□□□ 1.34
SNRPA1-203ENST00000540017 CWF19L2Q2TBE0 894 aaKnown RBP23.4■■□□□ 1.34
SNRPA1-203ENST00000540017 ZBTB38Q8NAP3 1195 aaPredicted RBP23.4■■□□□ 1.34
SNRPA1-203ENST00000540017 RBM17Q96I25 401 aaKnown RBP23.4■■□□□ 1.34
SNRPA1-203ENST00000540017 CRAMP1Q96RY5 1269 aa23.4■■□□□ 1.34
SNRPA1-203ENST00000540017 CWC25Q9NXE8 425 aaPredicted RBP23.4■■□□□ 1.34
SNRPA1-203ENST00000540017 IRS4O14654 1257 aaPredicted RBP23.39■■□□□ 1.33
SNRPA1-203ENST00000540017 RNF181Q9P0P0 153 aa23.39■■□□□ 1.33
SNRPA1-203ENST00000540017 NEURL1BA8MQ27 555 aa23.38■■□□□ 1.33
SNRPA1-203ENST00000540017 F6X3S4 739 aa23.38■■□□□ 1.33
SNRPA1-203ENST00000540017 PCCAP05165 728 aaPredicted RBP23.38■■□□□ 1.33
SNRPA1-203ENST00000540017 HNRNPUQ00839 825 aaKnown RBP eCLIP23.38■■□□□ 1.33
SNRPA1-203ENST00000540017 DNAAF4Q8WXU2 420 aa23.38■■□□□ 1.33
SNRPA1-203ENST00000540017 ABCC4O15439 1325 aa23.37■■□□□ 1.33
SNRPA1-203ENST00000540017 NEXNQ0ZGT2 675 aa23.37■■□□□ 1.33
SNRPA1-203ENST00000540017 MRPL50Q8N5N7 158 aaKnown RBP23.37■■□□□ 1.33
SNRPA1-203ENST00000540017 SNED1Q8TER0 1413 aa23.36■■□□□ 1.33
SNRPA1-203ENST00000540017 LMNB1P20700 586 aa23.36■■□□□ 1.33
SNRPA1-203ENST00000540017 CCDC93Q567U6 631 aa23.36■■□□□ 1.33
SNRPA1-203ENST00000540017 SOGA3Q5TF21 947 aa23.36■■□□□ 1.33
SNRPA1-203ENST00000540017 SSH1Q8WYL5 1049 aa23.36■■□□□ 1.33
SNRPA1-203ENST00000540017 TAF1P21675 1872 aa23.35■■□□□ 1.33
SNRPA1-203ENST00000540017 CCDC88AQ3V6T2 1871 aa23.35■■□□□ 1.33
SNRPA1-203ENST00000540017 SF3B3Q15393 1217 aaKnown RBP23.35■■□□□ 1.33
SNRPA1-203ENST00000540017 ZNF526Q8TF50 670 aaPredicted RBP23.35■■□□□ 1.33
SNRPA1-203ENST00000540017 COL4A1P02462 1669 aa23.35■■□□□ 1.33
SNRPA1-203ENST00000540017 LTBP3Q9NS15 1303 aa23.34■■□□□ 1.33
SNRPA1-203ENST00000540017 PPEF1O14829 653 aaPredicted RBP23.34■■□□□ 1.33
SNRPA1-203ENST00000540017 BCL2L13Q9BXK5 485 aa23.34■■□□□ 1.33
SNRPA1-203ENST00000540017 TAOK3Q9H2K8 898 aa23.34■■□□□ 1.33
SNRPA1-203ENST00000540017 GCKRQ14397 625 aa23.33■■□□□ 1.33
SNRPA1-203ENST00000540017 LINS1Q8NG48 757 aa23.33■■□□□ 1.33
SNRPA1-203ENST00000540017 BEND3Q5T5X7 828 aa23.32■■□□□ 1.32
SNRPA1-203ENST00000540017 DDX46Q7L014 1031 aaKnown RBP23.32■■□□□ 1.32
SNRPA1-203ENST00000540017 CDHR2Q9BYE9 1310 aa23.32■■□□□ 1.32
SNRPA1-203ENST00000540017 H7C1W4 665 aa23.31■■□□□ 1.32
SNRPA1-203ENST00000540017 FKBP4Q02790 459 aaKnown RBP eCLIP23.31■■□□□ 1.32
SNRPA1-203ENST00000540017 GRAPQ13588 217 aa23.31■■□□□ 1.32
SNRPA1-203ENST00000540017 RTKN2Q8IZC4 609 aa23.31■■□□□ 1.32
SNRPA1-203ENST00000540017 GRAPLQ8TC17 118 aaPredicted RBP23.31■■□□□ 1.32
SNRPA1-203ENST00000540017 PDE8AO60658 829 aa23.3■■□□□ 1.32
SNRPA1-203ENST00000540017 CASP7P55210 303 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms