RNA–Protein interactions for RNA: ENST00000539967.6

RFX4-206, Transcript of regulatory factor X4, humanhuman

TSL 5

Gene RFX4, Length 1,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-206ENST00000539967 RNF123Q5XPI4 1314 aa16.59■□□□□ 0.25
RFX4-206ENST00000539967 TAF1P21675 1872 aa16.59■□□□□ 0.25
RFX4-206ENST00000539967 NEURL1BA8MQ27 555 aa16.58■□□□□ 0.24
RFX4-206ENST00000539967 CENPBP07199 599 aaPredicted RBP16.58■□□□□ 0.24
RFX4-206ENST00000539967 MMP10P09238 476 aa16.58■□□□□ 0.24
RFX4-206ENST00000539967 NLRP10Q86W26 655 aa16.58■□□□□ 0.24
RFX4-206ENST00000539967 DZIP1LQ8IYY4 767 aaKnown RBP16.58■□□□□ 0.24
RFX4-206ENST00000539967 ARHGAP45Q92619 1136 aa16.58■□□□□ 0.24
RFX4-206ENST00000539967 CRBNQ96SW2 442 aa16.58■□□□□ 0.24
RFX4-206ENST00000539967 CHMP4AQ9BY43 222 aa16.58■□□□□ 0.24
RFX4-206ENST00000539967 API5Q9BZZ5 524 aaKnown RBP16.58■□□□□ 0.24
RFX4-206ENST00000539967 COL24A1Q17RW2 1714 aa16.57■□□□□ 0.24
RFX4-206ENST00000539967 IPO8O15397 1037 aaKnown RBP16.57■□□□□ 0.24
RFX4-206ENST00000539967 FLAD1Q8NFF5 587 aa16.57■□□□□ 0.24
RFX4-206ENST00000539967 CARMIL3Q8ND23 1372 aa16.56■□□□□ 0.24
RFX4-206ENST00000539967 POLRMTO00411 1230 aaKnown RBP16.56■□□□□ 0.24
RFX4-206ENST00000539967 FAM89AQ96GI7 184 aa16.56■□□□□ 0.24
RFX4-206ENST00000539967 ANKRD31Q8N7Z5 1873 aa16.56■□□□□ 0.24
RFX4-206ENST00000539967 ATP10DQ9P241 1426 aa16.55■□□□□ 0.24
RFX4-206ENST00000539967 ERFEQ4G0M1 354 aa16.55■□□□□ 0.24
RFX4-206ENST00000539967 C3orf67Q6ZVT6 689 aa16.55■□□□□ 0.24
RFX4-206ENST00000539967 ITPRIPQ8IWB1 547 aa16.55■□□□□ 0.24
RFX4-206ENST00000539967 LINS1Q8NG48 757 aa16.55■□□□□ 0.24
RFX4-206ENST00000539967 SETDB2Q96T68 719 aa16.55■□□□□ 0.24
RFX4-206ENST00000539967 MEIS3Q99687 375 aa16.55■□□□□ 0.24
RFX4-206ENST00000539967 SRCIN1Q9C0H9 1055 aa16.55■□□□□ 0.24
RFX4-206ENST00000539967 LAMB2P55268 1798 aa16.55■□□□□ 0.24
RFX4-206ENST00000539967 DDX60Q8IY21 1712 aaKnown RBP16.55■□□□□ 0.24
RFX4-206ENST00000539967 ABCC12Q96J65 1359 aa16.54■□□□□ 0.24
RFX4-206ENST00000539967 TNRC6CQ9HCJ0 1690 aaKnown RBP16.54■□□□□ 0.24
RFX4-206ENST00000539967 NTSR2O95665 410 aa16.54■□□□□ 0.24
RFX4-206ENST00000539967 SERPINB2P05120 415 aa16.54■□□□□ 0.24
RFX4-206ENST00000539967 NBPF7P0C2Y1 421 aaPredicted RBP16.54■□□□□ 0.24
RFX4-206ENST00000539967 MKRN4PQ13434 485 aaPredicted RBP16.54■□□□□ 0.24
RFX4-206ENST00000539967 GCKRQ14397 625 aa16.54■□□□□ 0.24
RFX4-206ENST00000539967 INTS3Q68E01 1043 aaKnown RBP16.54■□□□□ 0.24
RFX4-206ENST00000539967 CLEC4GQ6UXB4 293 aa16.54■□□□□ 0.24
RFX4-206ENST00000539967 FTSJ3Q8IY81 847 aaKnown RBP16.54■□□□□ 0.24
RFX4-206ENST00000539967 USP44Q9H0E7 712 aa16.54■□□□□ 0.24
RFX4-206ENST00000539967 C1orf115Q9H7X2 142 aa16.54■□□□□ 0.24
RFX4-206ENST00000539967 ZNF652Q9Y2D9 606 aa16.54■□□□□ 0.24
RFX4-206ENST00000539967 HCLS1P14317 486 aaPredicted RBP16.53■□□□□ 0.24
RFX4-206ENST00000539967 PTGER2P43116 358 aa16.53■□□□□ 0.24
RFX4-206ENST00000539967 EPHA10Q5JZY3 1008 aa16.53■□□□□ 0.24
RFX4-206ENST00000539967 NLGN1Q8N2Q7 840 aa16.53■□□□□ 0.24
RFX4-206ENST00000539967 EXOC6Q8TAG9 804 aa16.53■□□□□ 0.24
RFX4-206ENST00000539967 CWC25Q9NXE8 425 aaPredicted RBP16.53■□□□□ 0.24
RFX4-206ENST00000539967 CASP7P55210 303 aa16.52■□□□□ 0.24
RFX4-206ENST00000539967 NEXNQ0ZGT2 675 aa16.52■□□□□ 0.24
RFX4-206ENST00000539967 UBE3BQ7Z3V4 1068 aa16.52■□□□□ 0.24
RFX4-206ENST00000539967 SLC51AQ86UW1 340 aa16.52■□□□□ 0.24
RFX4-206ENST00000539967 KAZALD1Q96I82 304 aa16.52■□□□□ 0.24
RFX4-206ENST00000539967 CCDC85AQ96PX6 553 aaPredicted RBP16.52■□□□□ 0.24
RFX4-206ENST00000539967 SGIP1Q9BQI5 828 aa16.52■□□□□ 0.24
RFX4-206ENST00000539967 MTFR1LQ9H019 292 aa16.52■□□□□ 0.24
RFX4-206ENST00000539967 TRMT112Q9UI30 125 aaKnown RBP16.52■□□□□ 0.24
RFX4-206ENST00000539967 NRXN2Q9P2S2 1712 aa16.52■□□□□ 0.24
RFX4-206ENST00000539967 COL4A1P02462 1669 aa16.52■□□□□ 0.23
RFX4-206ENST00000539967 HMGB2P26583 209 aaKnown RBP16.51■□□□□ 0.23
RFX4-206ENST00000539967 TRIM28Q13263 835 aaKnown RBP16.51■□□□□ 0.23
RFX4-206ENST00000539967 HSP90AB3PQ58FF7 597 aa16.51■□□□□ 0.23
RFX4-206ENST00000539967 PRR5LQ6MZQ0 368 aa16.51■□□□□ 0.23
RFX4-206ENST00000539967 NBPF5PQ86XG9 351 aaPredicted RBP16.51■□□□□ 0.23
RFX4-206ENST00000539967 SUCLG2Q96I99 432 aa16.51■□□□□ 0.23
RFX4-206ENST00000539967 UTP14AQ9BVJ6 771 aaKnown RBP16.51■□□□□ 0.23
RFX4-206ENST00000539967 PXDNLA1KZ92 1463 aa16.5■□□□□ 0.23
RFX4-206ENST00000539967 H7C1W4 665 aa16.5■□□□□ 0.23
RFX4-206ENST00000539967 ZBTB7BO15156 539 aaPredicted RBP16.5■□□□□ 0.23
RFX4-206ENST00000539967 ALDH1L1O75891 902 aa16.5■□□□□ 0.23
RFX4-206ENST00000539967 CCT4P50991 539 aaKnown RBP16.5■□□□□ 0.23
RFX4-206ENST00000539967 MVPQ14764 893 aaKnown RBP16.5■□□□□ 0.23
RFX4-206ENST00000539967 CCDC191Q8NCU4 936 aa16.5■□□□□ 0.23
RFX4-206ENST00000539967 SLC16A10Q8TF71 515 aa16.5■□□□□ 0.23
RFX4-206ENST00000539967 PARP3Q9Y6F1 533 aa16.5■□□□□ 0.23
RFX4-206ENST00000539967 MYH3P11055 1940 aa16.49■□□□□ 0.23
RFX4-206ENST00000539967 GRM8O00222 908 aa16.49■□□□□ 0.23
RFX4-206ENST00000539967 CACNA1SQ13698 1873 aa16.49■□□□□ 0.23
RFX4-206ENST00000539967 PDE3AQ14432 1141 aa16.49■□□□□ 0.23
RFX4-206ENST00000539967 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.49■□□□□ 0.23
RFX4-206ENST00000539967 WWC3Q9ULE0 1092 aa16.49■□□□□ 0.23
RFX4-206ENST00000539967 C9orf78Q9NZ63 289 aaPredicted RBP16.48■□□□□ 0.23
RFX4-206ENST00000539967 COL11A2P13942 1736 aaPredicted RBP16.48■□□□□ 0.23
RFX4-206ENST00000539967 SPEF2Q9C093 1822 aa16.47■□□□□ 0.23
RFX4-206ENST00000539967 IRS4O14654 1257 aaPredicted RBP16.47■□□□□ 0.23
RFX4-206ENST00000539967 PCCAP05165 728 aaPredicted RBP16.47■□□□□ 0.23
RFX4-206ENST00000539967 PARP10Q53GL7 1025 aa16.47■□□□□ 0.23
RFX4-206ENST00000539967 PPP1R42Q7Z4L9 355 aa16.47■□□□□ 0.23
RFX4-206ENST00000539967 KLHL34Q8N239 644 aa16.47■□□□□ 0.23
RFX4-206ENST00000539967 CNBD1Q8NA66 436 aa16.47■□□□□ 0.23
RFX4-206ENST00000539967 ZBTB38Q8NAP3 1195 aaPredicted RBP16.47■□□□□ 0.23
RFX4-206ENST00000539967 LRRFIP2Q9Y608 721 aaKnown RBP16.47■□□□□ 0.23
RFX4-206ENST00000539967 SH3TC1Q8TE82 1336 aa16.46■□□□□ 0.23
RFX4-206ENST00000539967 GTF2E1P29083 439 aaPredicted RBP16.46■□□□□ 0.23
RFX4-206ENST00000539967 FOXO4P98177 505 aa16.46■□□□□ 0.23
RFX4-206ENST00000539967 RGL2O15211 777 aa16.45■□□□□ 0.22
RFX4-206ENST00000539967 NPHP1O15259 732 aa16.45■□□□□ 0.22
RFX4-206ENST00000539967 CHRNA5P30532 468 aa16.45■□□□□ 0.22
RFX4-206ENST00000539967 TPTE2Q6XPS3 522 aa16.45■□□□□ 0.22
RFX4-206ENST00000539967 ANKRD44Q8N8A2 993 aa16.45■□□□□ 0.22
RFX4-206ENST00000539967 BICC1Q9H694 974 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms