RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 GNAI1P63096 354 aa21.83■■□□□ 1.09
DDB1-215ENST00000539712 SOGA3Q5TF21 947 aa21.83■■□□□ 1.09
DDB1-215ENST00000539712 TIAM2Q8IVF5 1701 aa21.83■■□□□ 1.08
DDB1-215ENST00000539712 DICER1Q9UPY3 1922 aaKnown RBP21.82■■□□□ 1.08
DDB1-215ENST00000539712 ALDH1B1P30837 517 aa21.82■■□□□ 1.08
DDB1-215ENST00000539712 TCIRG1Q13488 830 aa21.82■■□□□ 1.08
DDB1-215ENST00000539712 PPP1R42Q7Z4L9 355 aa21.82■■□□□ 1.08
DDB1-215ENST00000539712 NLRP10Q86W26 655 aa21.82■■□□□ 1.08
DDB1-215ENST00000539712 DBF4Q9UBU7 674 aaPredicted RBP21.82■■□□□ 1.08
DDB1-215ENST00000539712 POTECB2RU33 542 aa21.81■■□□□ 1.08
DDB1-215ENST00000539712 CCDC93Q567U6 631 aa21.81■■□□□ 1.08
DDB1-215ENST00000539712 SLC51AQ86UW1 340 aa21.81■■□□□ 1.08
DDB1-215ENST00000539712 SYNE4Q8N205 404 aa21.81■■□□□ 1.08
DDB1-215ENST00000539712 C8orf58Q8NAV2 365 aa21.81■■□□□ 1.08
DDB1-215ENST00000539712 UTP14AQ9BVJ6 771 aaKnown RBP21.81■■□□□ 1.08
DDB1-215ENST00000539712 CALD1Q05682 793 aaKnown RBP21.8■■□□□ 1.08
DDB1-215ENST00000539712 RBM46Q8TBY0 533 aaKnown RBP21.8■■□□□ 1.08
DDB1-215ENST00000539712 ELL2O00472 640 aaPredicted RBP21.79■■□□□ 1.08
DDB1-215ENST00000539712 CCDC27Q2M243 656 aa21.79■■□□□ 1.08
DDB1-215ENST00000539712 HSP90AB3PQ58FF7 597 aa21.79■■□□□ 1.08
DDB1-215ENST00000539712 PLBD2Q8NHP8 589 aa21.79■■□□□ 1.08
DDB1-215ENST00000539712 MRS2Q9HD23 443 aa21.79■■□□□ 1.08
DDB1-215ENST00000539712 ANKRD36CQ5JPF3 1778 aa21.79■■□□□ 1.08
DDB1-215ENST00000539712 ANP32CO43423 234 aa21.78■■□□□ 1.08
DDB1-215ENST00000539712 FKBP4Q02790 459 aaKnown RBP eCLIP21.78■■□□□ 1.08
DDB1-215ENST00000539712 ANKRD13DQ6ZTN6 518 aa21.78■■□□□ 1.08
DDB1-215ENST00000539712 WWC1Q8IX03 1113 aa21.78■■□□□ 1.08
DDB1-215ENST00000539712 CRAMP1Q96RY5 1269 aa21.78■■□□□ 1.08
DDB1-215ENST00000539712 HYPKQ9NX55 129 aa21.78■■□□□ 1.08
DDB1-215ENST00000539712 RTKN2Q8IZC4 609 aa21.77■■□□□ 1.08
DDB1-215ENST00000539712 RPGRQ92834 1020 aaKnown RBP21.77■■□□□ 1.08
DDB1-215ENST00000539712 ISCA1Q9BUE6 129 aa21.77■■□□□ 1.08
DDB1-215ENST00000539712 ZNF277Q9NRM2 450 aaPredicted RBP21.77■■□□□ 1.08
DDB1-215ENST00000539712 RNF123Q5XPI4 1314 aa21.77■■□□□ 1.07
DDB1-215ENST00000539712 VEGFAP15692 232 aaPredicted RBP21.76■■□□□ 1.07
DDB1-215ENST00000539712 TSPYL6Q8N831 410 aa21.76■■□□□ 1.07
DDB1-215ENST00000539712 NLRP3Q96P20 1036 aa21.76■■□□□ 1.07
DDB1-215ENST00000539712 HCLS1P14317 486 aaPredicted RBP21.75■■□□□ 1.07
DDB1-215ENST00000539712 NCBP3Q53F19 620 aaKnown RBP21.75■■□□□ 1.07
DDB1-215ENST00000539712 ZNF428Q96B54 188 aa21.75■■□□□ 1.07
DDB1-215ENST00000539712 RBM17Q96I25 401 aaKnown RBP21.75■■□□□ 1.07
DDB1-215ENST00000539712 PHAXQ9H814 394 aaKnown RBP21.75■■□□□ 1.07
DDB1-215ENST00000539712 DPY19L2Q6NUT2 758 aa21.74■■□□□ 1.07
DDB1-215ENST00000539712 TSR2Q969E8 191 aaKnown RBP21.74■■□□□ 1.07
DDB1-215ENST00000539712 TRMT112Q9UI30 125 aaKnown RBP21.74■■□□□ 1.07
DDB1-215ENST00000539712 WDR90Q96KV7 1748 aa21.74■■□□□ 1.07
DDB1-215ENST00000539712 ATP5J2-PTCD1G3V325 749 aa21.73■■□□□ 1.07
DDB1-215ENST00000539712 DDNO94850 711 aaPredicted RBP21.73■■□□□ 1.07
DDB1-215ENST00000539712 C16orf71Q8IYS4 520 aaPredicted RBP21.73■■□□□ 1.07
DDB1-215ENST00000539712 PSMD1Q99460 953 aa21.73■■□□□ 1.07
DDB1-215ENST00000539712 SH3TC1Q8TE82 1336 aa21.73■■□□□ 1.07
DDB1-215ENST00000539712 FSTL1Q12841 308 aa21.72■■□□□ 1.07
DDB1-215ENST00000539712 TRIM28Q13263 835 aaKnown RBP21.72■■□□□ 1.07
DDB1-215ENST00000539712 CC2D2BQ6DHV5 1058 aa21.72■■□□□ 1.07
DDB1-215ENST00000539712 LAMB2P55268 1798 aa21.71■■□□□ 1.07
DDB1-215ENST00000539712 PPEF1O14829 653 aaPredicted RBP21.71■■□□□ 1.07
DDB1-215ENST00000539712 COL4A5P29400 1685 aa21.71■■□□□ 1.07
DDB1-215ENST00000539712 ABCC4O15439 1325 aa21.71■■□□□ 1.07
DDB1-215ENST00000539712 IARSP41252 1262 aaKnown RBP21.7■■□□□ 1.06
DDB1-215ENST00000539712 FAM89AQ96GI7 184 aa21.7■■□□□ 1.06
DDB1-215ENST00000539712 IL16Q14005 1332 aa21.7■■□□□ 1.06
DDB1-215ENST00000539712 FZD9O00144 591 aa21.69■■□□□ 1.06
DDB1-215ENST00000539712 TCERG1O14776 1098 aaKnown RBP21.69■■□□□ 1.06
DDB1-215ENST00000539712 APLP1P51693 650 aa21.69■■□□□ 1.06
DDB1-215ENST00000539712 DNAJC5GQ8N7S2 189 aa21.69■■□□□ 1.06
DDB1-215ENST00000539712 ATP6V0A2Q9Y487 856 aa21.69■■□□□ 1.06
DDB1-215ENST00000539712 ZNF541Q9H0D2 1346 aa21.69■■□□□ 1.06
DDB1-215ENST00000539712 GRIPAP1Q4V328 841 aa21.68■■□□□ 1.06
DDB1-215ENST00000539712 CCDC30Q5VVM6 783 aa21.68■■□□□ 1.06
DDB1-215ENST00000539712 DDX60Q8IY21 1712 aaKnown RBP21.67■■□□□ 1.06
DDB1-215ENST00000539712 RIC3Q7Z5B4 369 aa21.67■■□□□ 1.06
DDB1-215ENST00000539712 SMC1BQ8NDV3 1235 aa21.67■■□□□ 1.06
DDB1-215ENST00000539712 L3MBTL3Q96JM7 780 aaPredicted RBP21.67■■□□□ 1.06
DDB1-215ENST00000539712 PCNTO95613 3336 aa21.66■■□□□ 1.06
DDB1-215ENST00000539712 BBOX1O75936 387 aa21.66■■□□□ 1.06
DDB1-215ENST00000539712 GOLGA2Q08379 1002 aa21.66■■□□□ 1.06
DDB1-215ENST00000539712 TAF1P21675 1872 aa21.65■■□□□ 1.06
DDB1-215ENST00000539712 SF3B3Q15393 1217 aaKnown RBP21.65■■□□□ 1.06
DDB1-215ENST00000539712 POTEIP0CG38 1075 aa21.64■■□□□ 1.05
DDB1-215ENST00000539712 POTEJP0CG39 1038 aa21.64■■□□□ 1.05
DDB1-215ENST00000539712 HTRA3P83110 453 aa21.64■■□□□ 1.05
DDB1-215ENST00000539712 GRAPQ13588 217 aa21.64■■□□□ 1.05
DDB1-215ENST00000539712 RTL5Q5HYW3 569 aaPredicted RBP21.64■■□□□ 1.05
DDB1-215ENST00000539712 WDR63Q8IWG1 891 aa21.64■■□□□ 1.05
DDB1-215ENST00000539712 SP8Q8IXZ3 490 aa21.64■■□□□ 1.05
DDB1-215ENST00000539712 GRAPLQ8TC17 118 aaPredicted RBP21.64■■□□□ 1.05
DDB1-215ENST00000539712 MYD88Q99836 296 aa21.64■■□□□ 1.05
DDB1-215ENST00000539712 RTFDC1Q9BY42 306 aaPredicted RBP21.64■■□□□ 1.05
DDB1-215ENST00000539712 SALL2Q9Y467 1007 aaPredicted RBP21.64■■□□□ 1.05
DDB1-215ENST00000539712 COL4A1P02462 1669 aa21.63■■□□□ 1.05
DDB1-215ENST00000539712 FANCIQ9NVI1 1328 aa21.63■■□□□ 1.05
DDB1-215ENST00000539712 TWISTNBQ3B726 338 aaPredicted RBP21.63■■□□□ 1.05
DDB1-215ENST00000539712 DDX46Q7L014 1031 aaKnown RBP21.63■■□□□ 1.05
DDB1-215ENST00000539712 METTL22Q9BUU2 404 aaPredicted RBP21.63■■□□□ 1.05
DDB1-215ENST00000539712 CHMP4AQ9BY43 222 aa21.63■■□□□ 1.05
DDB1-215ENST00000539712 SPINK5Q9NQ38 1064 aaPredicted RBP21.63■■□□□ 1.05
DDB1-215ENST00000539712 IRS4O14654 1257 aaPredicted RBP21.62■■□□□ 1.05
DDB1-215ENST00000539712 G2E3Q7L622 706 aa21.62■■□□□ 1.05
DDB1-215ENST00000539712 ZBTB38Q8NAP3 1195 aaPredicted RBP21.62■■□□□ 1.05
DDB1-215ENST00000539712 TAF1DQ9H5J8 278 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms