RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 C3orf67Q6ZVT6 689 aa24.79■■□□□ 1.56
TNFRSF1A-212ENST00000539372 UTP14AQ9BVJ6 771 aaKnown RBP24.79■■□□□ 1.56
TNFRSF1A-212ENST00000539372 IFT57Q9NWB7 429 aa24.79■■□□□ 1.56
TNFRSF1A-212ENST00000539372 RIC1Q4ADV7 1423 aa24.78■■□□□ 1.56
TNFRSF1A-212ENST00000539372 GNAI1P63096 354 aa24.77■■□□□ 1.56
TNFRSF1A-212ENST00000539372 CALD1Q05682 793 aaKnown RBP24.77■■□□□ 1.56
TNFRSF1A-212ENST00000539372 HSP90AB3PQ58FF7 597 aa24.77■■□□□ 1.56
TNFRSF1A-212ENST00000539372 DPY19L2Q6NUT2 758 aa24.77■■□□□ 1.56
TNFRSF1A-212ENST00000539372 ZNF277Q9NRM2 450 aaPredicted RBP24.77■■□□□ 1.56
TNFRSF1A-212ENST00000539372 CEP350Q5VT06 3117 aa24.76■■□□□ 1.55
TNFRSF1A-212ENST00000539372 FKBP4Q02790 459 aaKnown RBP eCLIP24.76■■□□□ 1.55
TNFRSF1A-212ENST00000539372 TCIRG1Q13488 830 aa24.76■■□□□ 1.55
TNFRSF1A-212ENST00000539372 NLRP10Q86W26 655 aa24.76■■□□□ 1.55
TNFRSF1A-212ENST00000539372 RTKN2Q8IZC4 609 aa24.76■■□□□ 1.55
TNFRSF1A-212ENST00000539372 ZNF428Q96B54 188 aa24.76■■□□□ 1.55
TNFRSF1A-212ENST00000539372 DBF4Q9UBU7 674 aaPredicted RBP24.76■■□□□ 1.55
TNFRSF1A-212ENST00000539372 DICER1Q9UPY3 1922 aaKnown RBP24.76■■□□□ 1.55
TNFRSF1A-212ENST00000539372 ELL2O00472 640 aaPredicted RBP24.75■■□□□ 1.55
TNFRSF1A-212ENST00000539372 ANP32CO43423 234 aa24.75■■□□□ 1.55
TNFRSF1A-212ENST00000539372 VEGFAP15692 232 aaPredicted RBP24.75■■□□□ 1.55
TNFRSF1A-212ENST00000539372 HOXA10P31260 410 aaPredicted RBP24.75■■□□□ 1.55
TNFRSF1A-212ENST00000539372 RBM17Q96I25 401 aaKnown RBP24.75■■□□□ 1.55
TNFRSF1A-212ENST00000539372 NLRP3Q96P20 1036 aa24.74■■□□□ 1.55
TNFRSF1A-212ENST00000539372 MRS2Q9HD23 443 aa24.74■■□□□ 1.55
TNFRSF1A-212ENST00000539372 ANKRD36CQ5JPF3 1778 aa24.73■■□□□ 1.55
TNFRSF1A-212ENST00000539372 SLC10A5Q5PT55 438 aa24.73■■□□□ 1.55
TNFRSF1A-212ENST00000539372 SLC51AQ86UW1 340 aa24.73■■□□□ 1.55
TNFRSF1A-212ENST00000539372 SYNE4Q8N205 404 aa24.73■■□□□ 1.55
TNFRSF1A-212ENST00000539372 PLBD2Q8NHP8 589 aa24.73■■□□□ 1.55
TNFRSF1A-212ENST00000539372 POTECB2RU33 542 aa24.72■■□□□ 1.55
TNFRSF1A-212ENST00000539372 TCERG1O14776 1098 aaKnown RBP24.72■■□□□ 1.55
TNFRSF1A-212ENST00000539372 HCLS1P14317 486 aaPredicted RBP24.72■■□□□ 1.55
TNFRSF1A-212ENST00000539372 APLP1P51693 650 aa24.72■■□□□ 1.55
TNFRSF1A-212ENST00000539372 FSTL1Q12841 308 aa24.72■■□□□ 1.55
TNFRSF1A-212ENST00000539372 ANKRD13DQ6ZTN6 518 aa24.72■■□□□ 1.55
TNFRSF1A-212ENST00000539372 CRAMP1Q96RY5 1269 aa24.72■■□□□ 1.55
TNFRSF1A-212ENST00000539372 HYPKQ9NX55 129 aa24.72■■□□□ 1.55
TNFRSF1A-212ENST00000539372 TRMT112Q9UI30 125 aaKnown RBP24.72■■□□□ 1.55
TNFRSF1A-212ENST00000539372 DDNO94850 711 aaPredicted RBP24.71■■□□□ 1.55
TNFRSF1A-212ENST00000539372 C8orf58Q8NAV2 365 aa24.71■■□□□ 1.55
TNFRSF1A-212ENST00000539372 PPEF1O14829 653 aaPredicted RBP24.7■■□□□ 1.54
TNFRSF1A-212ENST00000539372 SMC1BQ8NDV3 1235 aa24.7■■□□□ 1.54
TNFRSF1A-212ENST00000539372 WDR90Q96KV7 1748 aa24.69■■□□□ 1.54
TNFRSF1A-212ENST00000539372 RNF123Q5XPI4 1314 aa24.69■■□□□ 1.54
TNFRSF1A-212ENST00000539372 ATP5J2-PTCD1G3V325 749 aa24.69■■□□□ 1.54
TNFRSF1A-212ENST00000539372 IARSP41252 1262 aaKnown RBP24.69■■□□□ 1.54
TNFRSF1A-212ENST00000539372 SNED1Q8TER0 1413 aa24.69■■□□□ 1.54
TNFRSF1A-212ENST00000539372 SH3TC1Q8TE82 1336 aa24.68■■□□□ 1.54
TNFRSF1A-212ENST00000539372 CC2D2BQ6DHV5 1058 aa24.68■■□□□ 1.54
TNFRSF1A-212ENST00000539372 ZNF541Q9H0D2 1346 aa24.67■■□□□ 1.54
TNFRSF1A-212ENST00000539372 TSR2Q969E8 191 aaKnown RBP24.67■■□□□ 1.54
TNFRSF1A-212ENST00000539372 PSMD1Q99460 953 aa24.67■■□□□ 1.54
TNFRSF1A-212ENST00000539372 ISCA1Q9BUE6 129 aa24.67■■□□□ 1.54
TNFRSF1A-212ENST00000539372 PHAXQ9H814 394 aaKnown RBP24.67■■□□□ 1.54
TNFRSF1A-212ENST00000539372 ABCC4O15439 1325 aa24.66■■□□□ 1.54
TNFRSF1A-212ENST00000539372 WWC1Q8IX03 1113 aa24.66■■□□□ 1.54
TNFRSF1A-212ENST00000539372 TSPYL6Q8N831 410 aa24.66■■□□□ 1.54
TNFRSF1A-212ENST00000539372 HTRA3P83110 453 aa24.65■■□□□ 1.54
TNFRSF1A-212ENST00000539372 CCDC27Q2M243 656 aa24.65■■□□□ 1.54
TNFRSF1A-212ENST00000539372 RIC3Q7Z5B4 369 aa24.65■■□□□ 1.54
TNFRSF1A-212ENST00000539372 GOLGA2Q08379 1002 aa24.64■■□□□ 1.54
TNFRSF1A-212ENST00000539372 FAM89AQ96GI7 184 aa24.64■■□□□ 1.54
TNFRSF1A-212ENST00000539372 LAMB2P55268 1798 aa24.63■■□□□ 1.53
TNFRSF1A-212ENST00000539372 ATP6V0A2Q9Y487 856 aa24.63■■□□□ 1.53
TNFRSF1A-212ENST00000539372 GRIPAP1Q4V328 841 aa24.62■■□□□ 1.53
TNFRSF1A-212ENST00000539372 RTL5Q5HYW3 569 aaPredicted RBP24.62■■□□□ 1.53
TNFRSF1A-212ENST00000539372 CCDC30Q5VVM6 783 aa24.62■■□□□ 1.53
TNFRSF1A-212ENST00000539372 DDX46Q7L014 1031 aaKnown RBP24.62■■□□□ 1.53
TNFRSF1A-212ENST00000539372 JDP2Q8WYK2 163 aa24.62■■□□□ 1.53
TNFRSF1A-212ENST00000539372 TMX4Q9H1E5 349 aaPredicted RBP24.62■■□□□ 1.53
TNFRSF1A-212ENST00000539372 SALL2Q9Y467 1007 aaPredicted RBP24.62■■□□□ 1.53
TNFRSF1A-212ENST00000539372 FZD9O00144 591 aa24.61■■□□□ 1.53
TNFRSF1A-212ENST00000539372 COL4A5P29400 1685 aa24.6■■□□□ 1.53
TNFRSF1A-212ENST00000539372 POTEIP0CG38 1075 aa24.6■■□□□ 1.53
TNFRSF1A-212ENST00000539372 POTEJP0CG39 1038 aa24.6■■□□□ 1.53
TNFRSF1A-212ENST00000539372 LARGE2Q8N3Y3 721 aa24.6■■□□□ 1.53
TNFRSF1A-212ENST00000539372 DNAJC5GQ8N7S2 189 aa24.6■■□□□ 1.53
TNFRSF1A-212ENST00000539372 L3MBTL3Q96JM7 780 aaPredicted RBP24.6■■□□□ 1.53
TNFRSF1A-212ENST00000539372 IQCA1LA6NCM1 817 aa24.59■■□□□ 1.53
TNFRSF1A-212ENST00000539372 BBOX1O75936 387 aa24.59■■□□□ 1.53
TNFRSF1A-212ENST00000539372 TRIM28Q13263 835 aaKnown RBP24.59■■□□□ 1.53
TNFRSF1A-212ENST00000539372 MYD88Q99836 296 aa24.59■■□□□ 1.53
TNFRSF1A-212ENST00000539372 GRAPQ13588 217 aa24.58■■□□□ 1.53
TNFRSF1A-212ENST00000539372 GRAPLQ8TC17 118 aaPredicted RBP24.58■■□□□ 1.53
TNFRSF1A-212ENST00000539372 DDX60Q8IY21 1712 aaKnown RBP24.58■■□□□ 1.52
TNFRSF1A-212ENST00000539372 SP8Q8IXZ3 490 aa24.57■■□□□ 1.52
TNFRSF1A-212ENST00000539372 CHMP4AQ9BY43 222 aa24.57■■□□□ 1.52
TNFRSF1A-212ENST00000539372 TAF1DQ9H5J8 278 aaPredicted RBP24.57■■□□□ 1.52
TNFRSF1A-212ENST00000539372 IRS4O14654 1257 aaPredicted RBP24.56■■□□□ 1.52
TNFRSF1A-212ENST00000539372 PPIP5K2O43314 1243 aa24.56■■□□□ 1.52
TNFRSF1A-212ENST00000539372 EIF6P56537 245 aaKnown RBP24.56■■□□□ 1.52
TNFRSF1A-212ENST00000539372 AOC3Q16853 763 aa24.56■■□□□ 1.52
TNFRSF1A-212ENST00000539372 TWISTNBQ3B726 338 aaPredicted RBP24.56■■□□□ 1.52
TNFRSF1A-212ENST00000539372 IL16Q14005 1332 aa24.56■■□□□ 1.52
TNFRSF1A-212ENST00000539372 DDX58O95786 925 aaKnown RBP24.55■■□□□ 1.52
TNFRSF1A-212ENST00000539372 CHADLQ6NUI6 762 aa24.55■■□□□ 1.52
TNFRSF1A-212ENST00000539372 DPP8Q6V1X1 898 aaPredicted RBP24.55■■□□□ 1.52
TNFRSF1A-212ENST00000539372 NIM1KQ8IY84 436 aa24.55■■□□□ 1.52
TNFRSF1A-212ENST00000539372 FAM9BQ8IZU0 186 aa24.55■■□□□ 1.52
TNFRSF1A-212ENST00000539372 GPC2Q8N158 579 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms