RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 ABCC12Q96J65 1359 aa18.84■□□□□ 0.61
PBX3-212ENST00000538998 CNGB1Q14028 1251 aaPredicted RBP18.84■□□□□ 0.61
PBX3-212ENST00000538998 USP50Q70EL3 339 aaPredicted RBP18.84■□□□□ 0.61
PBX3-212ENST00000538998 RPGRQ92834 1020 aaKnown RBP18.84■□□□□ 0.61
PBX3-212ENST00000538998 NUDCQ9Y266 331 aa18.84■□□□□ 0.61
PBX3-212ENST00000538998 RIC1Q4ADV7 1423 aa18.83■□□□□ 0.61
PBX3-212ENST00000538998 COL4A5P29400 1685 aa18.83■□□□□ 0.61
PBX3-212ENST00000538998 HOXA10P31260 410 aaPredicted RBP18.83■□□□□ 0.6
PBX3-212ENST00000538998 SCNN1DP51172 638 aa18.83■□□□□ 0.6
PBX3-212ENST00000538998 LARGE2Q8N3Y3 721 aa18.83■□□□□ 0.6
PBX3-212ENST00000538998 GPR101Q96P66 508 aaPredicted RBP18.83■□□□□ 0.6
PBX3-212ENST00000538998 ERVV-1B6SEH8 477 aa18.82■□□□□ 0.6
PBX3-212ENST00000538998 HTATSF1O43719 755 aaKnown RBP18.82■□□□□ 0.6
PBX3-212ENST00000538998 EPS15P42566 896 aa18.82■□□□□ 0.6
PBX3-212ENST00000538998 NUTM1Q86Y26 1132 aa18.82■□□□□ 0.6
PBX3-212ENST00000538998 LTBP1Q14766 1721 aa18.82■□□□□ 0.6
PBX3-212ENST00000538998 IBTKQ9P2D0 1353 aaPredicted RBP18.81■□□□□ 0.6
PBX3-212ENST00000538998 MLLT1Q03111 559 aaPredicted RBP18.81■□□□□ 0.6
PBX3-212ENST00000538998 GRM1Q13255 1194 aa18.81■□□□□ 0.6
PBX3-212ENST00000538998 CYP4F22Q6NT55 531 aa18.81■□□□□ 0.6
PBX3-212ENST00000538998 TLL2Q9Y6L7 1015 aa18.81■□□□□ 0.6
PBX3-212ENST00000538998 CCDC85CA6NKD9 419 aa18.8■□□□□ 0.6
PBX3-212ENST00000538998 U2AF1L5P0DN76 240 aaPredicted RBP18.8■□□□□ 0.6
PBX3-212ENST00000538998 U2AF1Q01081 240 aaKnown RBP eCLIP18.8■□□□□ 0.6
PBX3-212ENST00000538998 FMR1Q06787 632 aaKnown RBP eCLIP18.8■□□□□ 0.6
PBX3-212ENST00000538998 TAF7Q15545 349 aaPredicted RBP18.8■□□□□ 0.6
PBX3-212ENST00000538998 CST9Q5W186 159 aa18.8■□□□□ 0.6
PBX3-212ENST00000538998 NIM1KQ8IY84 436 aa18.8■□□□□ 0.6
PBX3-212ENST00000538998 MAP3K15Q6ZN16 1313 aa18.79■□□□□ 0.6
PBX3-212ENST00000538998 LAMB4A4D0S4 1761 aa18.79■□□□□ 0.6
PBX3-212ENST00000538998 MAP2K2P36507 400 aa18.79■□□□□ 0.6
PBX3-212ENST00000538998 RGS19P49795 217 aa18.79■□□□□ 0.6
PBX3-212ENST00000538998 DCTN1Q14203 1278 aa18.79■□□□□ 0.6
PBX3-212ENST00000538998 KIF6Q6ZMV9 814 aa18.79■□□□□ 0.6
PBX3-212ENST00000538998 CCER1Q8TC90 406 aaPredicted RBP18.79■□□□□ 0.6
PBX3-212ENST00000538998 RBM17Q96I25 401 aaKnown RBP18.79■□□□□ 0.6
PBX3-212ENST00000538998 CRAMP1Q96RY5 1269 aa18.79■□□□□ 0.6
PBX3-212ENST00000538998 TRAF5O00463 557 aa18.78■□□□□ 0.6
PBX3-212ENST00000538998 PPEF1O14829 653 aaPredicted RBP18.78■□□□□ 0.6
PBX3-212ENST00000538998 CA12O43570 354 aa18.78■□□□□ 0.6
PBX3-212ENST00000538998 ADARB2Q9NS39 739 aaKnown RBP18.78■□□□□ 0.6
PBX3-212ENST00000538998 NGEFQ8N5V2 710 aa18.77■□□□□ 0.6
PBX3-212ENST00000538998 TMX4Q9H1E5 349 aaPredicted RBP18.77■□□□□ 0.6
PBX3-212ENST00000538998 VPS33BQ9H267 617 aa18.77■□□□□ 0.6
PBX3-212ENST00000538998 UBN2Q6ZU65 1347 aa18.76■□□□□ 0.59
PBX3-212ENST00000538998 PPIP5K2O43314 1243 aa18.76■□□□□ 0.59
PBX3-212ENST00000538998 GPRC5DQ9NZD1 345 aa18.76■□□□□ 0.59
PBX3-212ENST00000538998 GPTP24298 496 aa18.75■□□□□ 0.59
PBX3-212ENST00000538998 SAPCD2Q86UD0 394 aa18.75■□□□□ 0.59
PBX3-212ENST00000538998 PNISRQ8TF01 805 aaKnown RBP18.75■□□□□ 0.59
PBX3-212ENST00000538998 HHIPL1Q96JK4 782 aa18.75■□□□□ 0.59
PBX3-212ENST00000538998 TRPM7Q96QT4 1865 aa18.75■□□□□ 0.59
PBX3-212ENST00000538998 TCERG1O14776 1098 aaKnown RBP18.74■□□□□ 0.59
PBX3-212ENST00000538998 AOC2O75106 756 aa18.74■□□□□ 0.59
PBX3-212ENST00000538998 CELF2O95319 508 aaKnown RBP18.74■□□□□ 0.59
PBX3-212ENST00000538998 AOC3Q16853 763 aa18.74■□□□□ 0.59
PBX3-212ENST00000538998 SUSD4Q5VX71 490 aa18.74■□□□□ 0.59
PBX3-212ENST00000538998 TTLL7Q6ZT98 887 aa18.74■□□□□ 0.59
PBX3-212ENST00000538998 ZBTB3Q9H5J0 574 aa18.74■□□□□ 0.59
PBX3-212ENST00000538998 MIS18AQ9NYP9 233 aa18.74■□□□□ 0.59
PBX3-212ENST00000538998 TSKSQ9UJT2 592 aa18.74■□□□□ 0.59
PBX3-212ENST00000538998 RRP7AQ9Y3A4 280 aaKnown RBP18.74■□□□□ 0.59
PBX3-212ENST00000538998 NTSR2O95665 410 aa18.73■□□□□ 0.59
PBX3-212ENST00000538998 BRPF1P55201 1214 aaPredicted RBP18.73■□□□□ 0.59
PBX3-212ENST00000538998 PPP1R42Q7Z4L9 355 aa18.73■□□□□ 0.59
PBX3-212ENST00000538998 ZNF34Q8IZ26 560 aa18.73■□□□□ 0.59
PBX3-212ENST00000538998 SUPT20HQ8NEM7 779 aa18.73■□□□□ 0.59
PBX3-212ENST00000538998 ZNRF3Q9ULT6 936 aa18.73■□□□□ 0.59
PBX3-212ENST00000538998 CDHR2Q9BYE9 1310 aa18.73■□□□□ 0.59
PBX3-212ENST00000538998 NUP98P52948 1817 aa18.72■□□□□ 0.59
PBX3-212ENST00000538998 MYL6BP14649 208 aa18.72■□□□□ 0.59
PBX3-212ENST00000538998 GIGYF2Q6Y7W6 1299 aaKnown RBP18.72■□□□□ 0.59
PBX3-212ENST00000538998 SLC51AQ86UW1 340 aa18.72■□□□□ 0.59
PBX3-212ENST00000538998 NLRP3Q96P20 1036 aa18.72■□□□□ 0.59
PBX3-212ENST00000538998 ATP6V0A2Q9Y487 856 aa18.72■□□□□ 0.59
PBX3-212ENST00000538998 CXCL9Q07325 125 aa18.71■□□□□ 0.59
PBX3-212ENST00000538998 PARP10Q53GL7 1025 aa18.71■□□□□ 0.59
PBX3-212ENST00000538998 MCOLN1Q9GZU1 580 aa18.71■□□□□ 0.59
PBX3-212ENST00000538998 NEFMP07197 916 aa18.7■□□□□ 0.58
PBX3-212ENST00000538998 PPP2R1AP30153 589 aa18.7■□□□□ 0.58
PBX3-212ENST00000538998 GMPSP49915 693 aaPredicted RBP18.7■□□□□ 0.58
PBX3-212ENST00000538998 EIF4A1P60842 406 aaKnown RBP18.7■□□□□ 0.58
PBX3-212ENST00000538998 C3orf67Q6ZVT6 689 aa18.7■□□□□ 0.58
PBX3-212ENST00000538998 ZC3H15Q8WU90 426 aaKnown RBP18.7■□□□□ 0.58
PBX3-212ENST00000538998 RTFDC1Q9BY42 306 aaPredicted RBP18.7■□□□□ 0.58
PBX3-212ENST00000538998 GLIS2Q9BZE0 524 aaPredicted RBP18.7■□□□□ 0.58
PBX3-212ENST00000538998 PGAP2Q9UHJ9 254 aa18.7■□□□□ 0.58
PBX3-212ENST00000538998 KDM3BQ7LBC6 1761 aa18.7■□□□□ 0.58
PBX3-212ENST00000538998 ERBB4Q15303 1308 aa18.7■□□□□ 0.58
PBX3-212ENST00000538998 CFAP44Q96MT7 982 aa18.69■□□□□ 0.58
PBX3-212ENST00000538998 PCDH10Q9P2E7 1040 aa18.69■□□□□ 0.58
PBX3-212ENST00000538998 TNIP1Q15025 636 aa18.68■□□□□ 0.58
PBX3-212ENST00000538998 CIAPIN1Q6FI81 312 aa18.68■□□□□ 0.58
PBX3-212ENST00000538998 DPP8Q6V1X1 898 aaPredicted RBP18.68■□□□□ 0.58
PBX3-212ENST00000538998 ABCC4O15439 1325 aa18.68■□□□□ 0.58
PBX3-212ENST00000538998 KIAA2012Q0VF49 1180 aa18.67■□□□□ 0.58
PBX3-212ENST00000538998 NOGQ13253 232 aa18.67■□□□□ 0.58
PBX3-212ENST00000538998 SLC10A5Q5PT55 438 aa18.67■□□□□ 0.58
PBX3-212ENST00000538998 CDC37L1Q7L3B6 337 aa18.67■□□□□ 0.58
PBX3-212ENST00000538998 UTP14AQ9BVJ6 771 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms