RNA–Protein interactions for RNA: ENST00000538994.1

CPT1A-204, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 5 BASIC

Gene CPT1A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-204ENST00000538994 RIC1Q4ADV7 1423 aa14.31□□□□□ -0.12
CPT1A-204ENST00000538994 LMNB1P20700 586 aa14.3□□□□□ -0.12
CPT1A-204ENST00000538994 TCIRG1Q13488 830 aa14.3□□□□□ -0.12
CPT1A-204ENST00000538994 DBF4Q9UBU7 674 aaPredicted RBP14.3□□□□□ -0.12
CPT1A-204ENST00000538994 SALL2Q9Y467 1007 aaPredicted RBP14.3□□□□□ -0.12
CPT1A-204ENST00000538994 SLC10A5Q5PT55 438 aa14.29□□□□□ -0.12
CPT1A-204ENST00000538994 ISCA1Q9BUE6 129 aa14.29□□□□□ -0.12
CPT1A-204ENST00000538994 NYXQ9GZU5 481 aa14.29□□□□□ -0.12
CPT1A-204ENST00000538994 COL4A1P02462 1669 aa14.29□□□□□ -0.12
CPT1A-204ENST00000538994 GTF2E1P29083 439 aaPredicted RBP14.28□□□□□ -0.12
CPT1A-204ENST00000538994 HOXA10P31260 410 aaPredicted RBP14.28□□□□□ -0.12
CPT1A-204ENST00000538994 NCBP3Q53F19 620 aaKnown RBP14.28□□□□□ -0.12
CPT1A-204ENST00000538994 PARP10Q53GL7 1025 aa14.28□□□□□ -0.12
CPT1A-204ENST00000538994 ANKRD13DQ6ZTN6 518 aa14.28□□□□□ -0.12
CPT1A-204ENST00000538994 TIAM2Q8IVF5 1701 aa14.28□□□□□ -0.12
CPT1A-204ENST00000538994 PLBD2Q8NHP8 589 aa14.28□□□□□ -0.12
CPT1A-204ENST00000538994 LAMB2P55268 1798 aa14.27□□□□□ -0.12
CPT1A-204ENST00000538994 LTBP3Q9NS15 1303 aa14.27□□□□□ -0.12
CPT1A-204ENST00000538994 POTECB2RU33 542 aa14.27□□□□□ -0.13
CPT1A-204ENST00000538994 ATP5J2-PTCD1G3V325 749 aa14.27□□□□□ -0.13
CPT1A-204ENST00000538994 TCERG1O14776 1098 aaKnown RBP14.27□□□□□ -0.13
CPT1A-204ENST00000538994 HCLS1P14317 486 aaPredicted RBP14.27□□□□□ -0.13
CPT1A-204ENST00000538994 CALD1Q05682 793 aaKnown RBP14.27□□□□□ -0.13
CPT1A-204ENST00000538994 FAM9BQ8IZU0 186 aa14.27□□□□□ -0.13
CPT1A-204ENST00000538994 UTP14AQ9BVJ6 771 aaKnown RBP14.27□□□□□ -0.13
CPT1A-204ENST00000538994 HYPKQ9NX55 129 aa14.27□□□□□ -0.13
CPT1A-204ENST00000538994 COL4A5P29400 1685 aa14.26□□□□□ -0.13
CPT1A-204ENST00000538994 PPP1R42Q7Z4L9 355 aa14.26□□□□□ -0.13
CPT1A-204ENST00000538994 DICER1Q9UPY3 1922 aaKnown RBP14.25□□□□□ -0.13
CPT1A-204ENST00000538994 IL16Q14005 1332 aa14.25□□□□□ -0.13
CPT1A-204ENST00000538994 FANCIQ9NVI1 1328 aa14.25□□□□□ -0.13
CPT1A-204ENST00000538994 DDX60Q8IY21 1712 aaKnown RBP14.25□□□□□ -0.13
CPT1A-204ENST00000538994 G2E3Q7L622 706 aa14.25□□□□□ -0.13
CPT1A-204ENST00000538994 TAOK3Q9H2K8 898 aa14.25□□□□□ -0.13
CPT1A-204ENST00000538994 RRAGCQ9HB90 399 aa14.25□□□□□ -0.13
CPT1A-204ENST00000538994 ALDH1B1P30837 517 aa14.24□□□□□ -0.13
CPT1A-204ENST00000538994 CCDC93Q567U6 631 aa14.24□□□□□ -0.13
CPT1A-204ENST00000538994 HSP90AB3PQ58FF7 597 aa14.24□□□□□ -0.13
CPT1A-204ENST00000538994 FAM89AQ96GI7 184 aa14.24□□□□□ -0.13
CPT1A-204ENST00000538994 CRAMP1Q96RY5 1269 aa14.24□□□□□ -0.13
CPT1A-204ENST00000538994 ZNF277Q9NRM2 450 aaPredicted RBP14.24□□□□□ -0.13
CPT1A-204ENST00000538994 TRMT112Q9UI30 125 aaKnown RBP14.24□□□□□ -0.13
CPT1A-204ENST00000538994 TAF1P21675 1872 aa14.24□□□□□ -0.13
CPT1A-204ENST00000538994 ABCC4O15439 1325 aa14.23□□□□□ -0.13
CPT1A-204ENST00000538994 ZNF521Q96K83 1311 aa14.23□□□□□ -0.13
CPT1A-204ENST00000538994 ZC3H4Q9UPT8 1303 aaKnown RBP14.23□□□□□ -0.13
CPT1A-204ENST00000538994 GLTPD2A6NH11 291 aa14.23□□□□□ -0.13
CPT1A-204ENST00000538994 FKBP4Q02790 459 aaKnown RBP eCLIP14.23□□□□□ -0.13
CPT1A-204ENST00000538994 TRIM28Q13263 835 aaKnown RBP14.23□□□□□ -0.13
CPT1A-204ENST00000538994 VAMP4O75379 141 aa14.22□□□□□ -0.13
CPT1A-204ENST00000538994 TWISTNBQ3B726 338 aaPredicted RBP14.22□□□□□ -0.13
CPT1A-204ENST00000538994 WDR63Q8IWG1 891 aa14.22□□□□□ -0.13
CPT1A-204ENST00000538994 JARID2Q92833 1246 aaPredicted RBP14.22□□□□□ -0.13
CPT1A-204ENST00000538994 RPGRQ92834 1020 aaKnown RBP14.22□□□□□ -0.13
CPT1A-204ENST00000538994 NLRP3Q96P20 1036 aa14.22□□□□□ -0.13
CPT1A-204ENST00000538994 RNF123Q5XPI4 1314 aa14.21□□□□□ -0.13
CPT1A-204ENST00000538994 SH3TC1Q8TE82 1336 aa14.21□□□□□ -0.13
CPT1A-204ENST00000538994 TOMM70O94826 608 aa14.21□□□□□ -0.13
CPT1A-204ENST00000538994 EXOSC9Q06265 439 aaKnown RBP14.21□□□□□ -0.13
CPT1A-204ENST00000538994 RTL5Q5HYW3 569 aaPredicted RBP14.21□□□□□ -0.13
CPT1A-204ENST00000538994 SOGA3Q5TF21 947 aa14.21□□□□□ -0.13
CPT1A-204ENST00000538994 CCDC30Q5VVM6 783 aa14.21□□□□□ -0.13
CPT1A-204ENST00000538994 RBM17Q96I25 401 aaKnown RBP14.21□□□□□ -0.13
CPT1A-204ENST00000538994 MYD88Q99836 296 aa14.21□□□□□ -0.13
CPT1A-204ENST00000538994 KDM2BQ8NHM5 1336 aa14.2□□□□□ -0.14
CPT1A-204ENST00000538994 PPEF1O14829 653 aaPredicted RBP14.2□□□□□ -0.14
CPT1A-204ENST00000538994 DDNO94850 711 aaPredicted RBP14.2□□□□□ -0.14
CPT1A-204ENST00000538994 IGKV5-2P06315 115 aa14.2□□□□□ -0.14
CPT1A-204ENST00000538994 RIC3Q7Z5B4 369 aa14.2□□□□□ -0.14
CPT1A-204ENST00000538994 RTKN2Q8IZC4 609 aa14.2□□□□□ -0.14
CPT1A-204ENST00000538994 METTL22Q9BUU2 404 aaPredicted RBP14.2□□□□□ -0.14
CPT1A-204ENST00000538994 WDR90Q96KV7 1748 aa14.2□□□□□ -0.14
CPT1A-204ENST00000538994 ZNF541Q9H0D2 1346 aa14.19□□□□□ -0.14
CPT1A-204ENST00000538994 PI4KAP2A4QPH2 592 aa14.19□□□□□ -0.14
CPT1A-204ENST00000538994 GOLGA2Q08379 1002 aa14.19□□□□□ -0.14
CPT1A-204ENST00000538994 PI4KAP1Q8N8J0 262 aa14.19□□□□□ -0.14
CPT1A-204ENST00000538994 PSMD1Q99460 953 aa14.19□□□□□ -0.14
CPT1A-204ENST00000538994 MAP3K2Q9Y2U5 619 aa14.19□□□□□ -0.14
CPT1A-204ENST00000538994 ATP6V0A2Q9Y487 856 aa14.19□□□□□ -0.14
CPT1A-204ENST00000538994 SLC4A2P04920 1241 aa14.18□□□□□ -0.14
CPT1A-204ENST00000538994 IARSP41252 1262 aaKnown RBP14.18□□□□□ -0.14
CPT1A-204ENST00000538994 SF3B3Q15393 1217 aaKnown RBP14.18□□□□□ -0.14
CPT1A-204ENST00000538994 CELF1Q92879 486 aaKnown RBP14.18□□□□□ -0.14
CPT1A-204ENST00000538994 DUOX1Q9NRD9 1551 aa14.17□□□□□ -0.14
CPT1A-204ENST00000538994 FZD9O00144 591 aa14.17□□□□□ -0.14
CPT1A-204ENST00000538994 IRS4O14654 1257 aaPredicted RBP14.17□□□□□ -0.14
CPT1A-204ENST00000538994 POTEIP0CG38 1075 aa14.17□□□□□ -0.14
CPT1A-204ENST00000538994 POTEJP0CG39 1038 aa14.17□□□□□ -0.14
CPT1A-204ENST00000538994 HSPA6P17066 643 aa14.17□□□□□ -0.14
CPT1A-204ENST00000538994 CWF19L2Q2TBE0 894 aaKnown RBP14.17□□□□□ -0.14
CPT1A-204ENST00000538994 KSR2Q6VAB6 950 aa14.17□□□□□ -0.14
CPT1A-204ENST00000538994 ZBTB38Q8NAP3 1195 aaPredicted RBP14.17□□□□□ -0.14
CPT1A-204ENST00000538994 RBM46Q8TBY0 533 aaKnown RBP14.17□□□□□ -0.14
CPT1A-204ENST00000538994 GRAPQ13588 217 aa14.16□□□□□ -0.14
CPT1A-204ENST00000538994 SP8Q8IXZ3 490 aa14.16□□□□□ -0.14
CPT1A-204ENST00000538994 CCDC191Q8NCU4 936 aa14.16□□□□□ -0.14
CPT1A-204ENST00000538994 GRAPLQ8TC17 118 aaPredicted RBP14.16□□□□□ -0.14
CPT1A-204ENST00000538994 SEC31BQ9NQW1 1179 aa14.16□□□□□ -0.14
CPT1A-204ENST00000538994 LRRC37AA6NMS7 1700 aa14.15□□□□□ -0.14
CPT1A-204ENST00000538994 BBOX1O75936 387 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms