RNA–Protein interactions for RNA: ENST00000538753.5

COPS7A-209, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-209ENST00000538753 ZEB1P37275 1124 aaPredicted RBP18.89■□□□□ 0.61
COPS7A-209ENST00000538753 FKBP4Q02790 459 aaKnown RBP eCLIP18.89■□□□□ 0.61
COPS7A-209ENST00000538753 OLFM4Q6UX06 510 aa18.89■□□□□ 0.61
COPS7A-209ENST00000538753 XAGE3Q8WTP9 111 aa18.89■□□□□ 0.61
COPS7A-209ENST00000538753 RPGRQ92834 1020 aaKnown RBP18.89■□□□□ 0.61
COPS7A-209ENST00000538753 POTECB2RU33 542 aa18.88■□□□□ 0.61
COPS7A-209ENST00000538753 APAF1O14727 1248 aa18.88■□□□□ 0.61
COPS7A-209ENST00000538753 HOXB7P09629 217 aa18.88■□□□□ 0.61
COPS7A-209ENST00000538753 HOXA10P31260 410 aaPredicted RBP18.88■□□□□ 0.61
COPS7A-209ENST00000538753 AIMP1Q12904 312 aaKnown RBP18.88■□□□□ 0.61
COPS7A-209ENST00000538753 SMC1BQ8NDV3 1235 aa18.88■□□□□ 0.61
COPS7A-209ENST00000538753 DDX60Q8IY21 1712 aaKnown RBP18.88■□□□□ 0.61
COPS7A-209ENST00000538753 HSP90AB3PQ58FF7 597 aa18.87■□□□□ 0.61
COPS7A-209ENST00000538753 UTP14AQ9BVJ6 771 aaKnown RBP18.87■□□□□ 0.61
COPS7A-209ENST00000538753 CHPF2Q9P2E5 772 aa18.87■□□□□ 0.61
COPS7A-209ENST00000538753 SNED1Q8TER0 1413 aa18.86■□□□□ 0.61
COPS7A-209ENST00000538753 HDGFL1Q5TGJ6 251 aa18.86■□□□□ 0.61
COPS7A-209ENST00000538753 ZNF277Q9NRM2 450 aaPredicted RBP18.86■□□□□ 0.61
COPS7A-209ENST00000538753 MBIPQ9NS73 344 aa18.86■□□□□ 0.61
COPS7A-209ENST00000538753 RNF123Q5XPI4 1314 aa18.85■□□□□ 0.61
COPS7A-209ENST00000538753 DDNO94850 711 aaPredicted RBP18.85■□□□□ 0.61
COPS7A-209ENST00000538753 ZNF853P0CG23 659 aa18.85■□□□□ 0.61
COPS7A-209ENST00000538753 TCIRG1Q13488 830 aa18.85■□□□□ 0.61
COPS7A-209ENST00000538753 SLC10A5Q5PT55 438 aa18.85■□□□□ 0.61
COPS7A-209ENST00000538753 CC2D2BQ6DHV5 1058 aa18.85■□□□□ 0.61
COPS7A-209ENST00000538753 DNAJC5GQ8N7S2 189 aa18.85■□□□□ 0.61
COPS7A-209ENST00000538753 RBM17Q96I25 401 aaKnown RBP18.85■□□□□ 0.61
COPS7A-209ENST00000538753 NLRP3Q96P20 1036 aa18.85■□□□□ 0.61
COPS7A-209ENST00000538753 CRAMP1Q96RY5 1269 aa18.85■□□□□ 0.61
COPS7A-209ENST00000538753 DBF4Q9UBU7 674 aaPredicted RBP18.85■□□□□ 0.61
COPS7A-209ENST00000538753 CALD1Q05682 793 aaKnown RBP18.84■□□□□ 0.61
COPS7A-209ENST00000538753 DUSP27Q5VZP5 1158 aa18.84■□□□□ 0.61
COPS7A-209ENST00000538753 C3orf67Q6ZVT6 689 aa18.84■□□□□ 0.61
COPS7A-209ENST00000538753 NLRP10Q86W26 655 aa18.84■□□□□ 0.61
COPS7A-209ENST00000538753 SYNE4Q8N205 404 aa18.84■□□□□ 0.61
COPS7A-209ENST00000538753 PSMD1Q99460 953 aa18.84■□□□□ 0.61
COPS7A-209ENST00000538753 IFT57Q9NWB7 429 aa18.84■□□□□ 0.61
COPS7A-209ENST00000538753 CACNA1FO60840 1977 aa18.84■□□□□ 0.61
COPS7A-209ENST00000538753 GNAI1P63096 354 aa18.83■□□□□ 0.6
COPS7A-209ENST00000538753 IARSP41252 1262 aaKnown RBP18.82■□□□□ 0.6
COPS7A-209ENST00000538753 GRIPAP1Q4V328 841 aa18.82■□□□□ 0.6
COPS7A-209ENST00000538753 CCDC184Q52MB2 194 aa18.82■□□□□ 0.6
COPS7A-209ENST00000538753 PLBD2Q8NHP8 589 aa18.82■□□□□ 0.6
COPS7A-209ENST00000538753 HYPKQ9NX55 129 aa18.82■□□□□ 0.6
COPS7A-209ENST00000538753 PPEF1O14829 653 aaPredicted RBP18.81■□□□□ 0.6
COPS7A-209ENST00000538753 ANKRD13DQ6ZTN6 518 aa18.81■□□□□ 0.6
COPS7A-209ENST00000538753 TRMT112Q9UI30 125 aaKnown RBP18.81■□□□□ 0.6
COPS7A-209ENST00000538753 HTRA3P83110 453 aa18.8■□□□□ 0.6
COPS7A-209ENST00000538753 L3MBTL3Q96JM7 780 aaPredicted RBP18.8■□□□□ 0.6
COPS7A-209ENST00000538753 ZNF541Q9H0D2 1346 aa18.79■□□□□ 0.6
COPS7A-209ENST00000538753 IQCA1LA6NCM1 817 aa18.79■□□□□ 0.6
COPS7A-209ENST00000538753 FZD9O00144 591 aa18.79■□□□□ 0.6
COPS7A-209ENST00000538753 HCLS1P14317 486 aaPredicted RBP18.79■□□□□ 0.6
COPS7A-209ENST00000538753 COL4A5P29400 1685 aa18.79■□□□□ 0.6
COPS7A-209ENST00000538753 SH3TC1Q8TE82 1336 aa18.78■□□□□ 0.6
COPS7A-209ENST00000538753 LRRC37AA6NMS7 1700 aa18.78■□□□□ 0.6
COPS7A-209ENST00000538753 TCERG1O14776 1098 aaKnown RBP18.78■□□□□ 0.6
COPS7A-209ENST00000538753 JDP2Q8WYK2 163 aa18.78■□□□□ 0.6
COPS7A-209ENST00000538753 MYH3P11055 1940 aa18.78■□□□□ 0.6
COPS7A-209ENST00000538753 ABCC4O15439 1325 aa18.77■□□□□ 0.6
COPS7A-209ENST00000538753 ELL2O00472 640 aaPredicted RBP18.77■□□□□ 0.6
COPS7A-209ENST00000538753 SLC51AQ86UW1 340 aa18.77■□□□□ 0.6
COPS7A-209ENST00000538753 ISCA1Q9BUE6 129 aa18.77■□□□□ 0.6
COPS7A-209ENST00000538753 TMX4Q9H1E5 349 aaPredicted RBP18.77■□□□□ 0.6
COPS7A-209ENST00000538753 ATP6V0A2Q9Y487 856 aa18.77■□□□□ 0.6
COPS7A-209ENST00000538753 ADAMTSL1Q8N6G6 1762 aa18.77■□□□□ 0.6
COPS7A-209ENST00000538753 ZNF316A6NFI3 1004 aaPredicted RBP18.76■□□□□ 0.59
COPS7A-209ENST00000538753 CHADLQ6NUI6 762 aa18.76■□□□□ 0.59
COPS7A-209ENST00000538753 C8orf58Q8NAV2 365 aa18.76■□□□□ 0.59
COPS7A-209ENST00000538753 KLRG1Q96E93 195 aa18.76■□□□□ 0.59
COPS7A-209ENST00000538753 ATP5J2-PTCD1G3V325 749 aa18.75■□□□□ 0.59
COPS7A-209ENST00000538753 BBOX1O75936 387 aa18.75■□□□□ 0.59
COPS7A-209ENST00000538753 POTEIP0CG38 1075 aa18.75■□□□□ 0.59
COPS7A-209ENST00000538753 POTEJP0CG39 1038 aa18.75■□□□□ 0.59
COPS7A-209ENST00000538753 DDX46Q7L014 1031 aaKnown RBP18.75■□□□□ 0.59
COPS7A-209ENST00000538753 GPC2Q8N158 579 aa18.75■□□□□ 0.59
COPS7A-209ENST00000538753 ZNF428Q96B54 188 aa18.75■□□□□ 0.59
COPS7A-209ENST00000538753 TAF1DQ9H5J8 278 aaPredicted RBP18.75■□□□□ 0.59
COPS7A-209ENST00000538753 TRIM28Q13263 835 aaKnown RBP18.74■□□□□ 0.59
COPS7A-209ENST00000538753 CCDC27Q2M243 656 aa18.74■□□□□ 0.59
COPS7A-209ENST00000538753 LARGE2Q8N3Y3 721 aa18.74■□□□□ 0.59
COPS7A-209ENST00000538753 PHAXQ9H814 394 aaKnown RBP18.74■□□□□ 0.59
COPS7A-209ENST00000538753 HACL1Q9UJ83 578 aa18.74■□□□□ 0.59
COPS7A-209ENST00000538753 EIF6P56537 245 aaKnown RBP18.73■□□□□ 0.59
COPS7A-209ENST00000538753 RIC3Q7Z5B4 369 aa18.73■□□□□ 0.59
COPS7A-209ENST00000538753 LDHDQ86WU2 507 aa18.73■□□□□ 0.59
COPS7A-209ENST00000538753 SP8Q8IXZ3 490 aa18.73■□□□□ 0.59
COPS7A-209ENST00000538753 FAM89AQ96GI7 184 aa18.73■□□□□ 0.59
COPS7A-209ENST00000538753 CHMP4AQ9BY43 222 aa18.73■□□□□ 0.59
COPS7A-209ENST00000538753 VPS33BQ9H267 617 aa18.73■□□□□ 0.59
COPS7A-209ENST00000538753 LTBP1Q14766 1721 aa18.73■□□□□ 0.59
COPS7A-209ENST00000538753 ANP32CO43423 234 aa18.72■□□□□ 0.59
COPS7A-209ENST00000538753 GOLGA2Q08379 1002 aa18.72■□□□□ 0.59
COPS7A-209ENST00000538753 GRAPQ13588 217 aa18.72■□□□□ 0.59
COPS7A-209ENST00000538753 CCDC30Q5VVM6 783 aa18.72■□□□□ 0.59
COPS7A-209ENST00000538753 GRAPLQ8TC17 118 aaPredicted RBP18.72■□□□□ 0.59
COPS7A-209ENST00000538753 RTFDC1Q9BY42 306 aaPredicted RBP18.72■□□□□ 0.59
COPS7A-209ENST00000538753 MRS2Q9HD23 443 aa18.72■□□□□ 0.59
COPS7A-209ENST00000538753 TRPM7Q96QT4 1865 aa18.71■□□□□ 0.59
COPS7A-209ENST00000538753 EPHX2P34913 555 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms