RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 LRRC8AQ8IWT6 810 aa21.98■■□□□ 1.11
SFSWAP-207ENST00000538548 ZNF215Q9UL58 517 aaPredicted RBP21.98■■□□□ 1.11
SFSWAP-207ENST00000538548 USP42Q9H9J4 1324 aaKnown RBP21.98■■□□□ 1.11
SFSWAP-207ENST00000538548 PTH1RQ03431 593 aa21.97■■□□□ 1.11
SFSWAP-207ENST00000538548 SLFNL1Q499Z3 407 aa21.97■■□□□ 1.11
SFSWAP-207ENST00000538548 FAM173BQ6P4H8 233 aa21.97■■□□□ 1.11
SFSWAP-207ENST00000538548 DNAJC25Q9H1X3 360 aa21.97■■□□□ 1.11
SFSWAP-207ENST00000538548 TTC41PQ6P2S7 1318 aa21.97■■□□□ 1.11
SFSWAP-207ENST00000538548 GLRX3O76003 335 aaKnown RBP21.96■■□□□ 1.11
SFSWAP-207ENST00000538548 PTPN14Q15678 1187 aa21.96■■□□□ 1.11
SFSWAP-207ENST00000538548 SARM1Q6SZW1 724 aa21.96■■□□□ 1.11
SFSWAP-207ENST00000538548 ERO1AQ96HE7 468 aa21.96■■□□□ 1.11
SFSWAP-207ENST00000538548 TPCN1Q9ULQ1 816 aa21.96■■□□□ 1.11
SFSWAP-207ENST00000538548 ZKSCAN1P17029 563 aaPredicted RBP21.96■■□□□ 1.11
SFSWAP-207ENST00000538548 CREBRFQ8IUR6 639 aa21.95■■□□□ 1.11
SFSWAP-207ENST00000538548 LEO1Q8WVC0 666 aaPredicted RBP21.95■■□□□ 1.11
SFSWAP-207ENST00000538548 PEAK1Q9H792 1746 aa21.95■■□□□ 1.1
SFSWAP-207ENST00000538548 MAP3K19Q56UN5 1328 aa21.95■■□□□ 1.1
SFSWAP-207ENST00000538548 MRFAP1L1Q96HT8 127 aa21.95■■□□□ 1.1
SFSWAP-207ENST00000538548 NECTIN1Q15223 517 aa21.94■■□□□ 1.1
SFSWAP-207ENST00000538548 OVOS2A0A0J9YW53 1432 aa21.94■■□□□ 1.1
SFSWAP-207ENST00000538548 OVOS2Q6IE36 1432 aa21.94■■□□□ 1.1
SFSWAP-207ENST00000538548 SRGAP3O43295 1099 aa21.94■■□□□ 1.1
SFSWAP-207ENST00000538548 FBXO38Q6PIJ6 1188 aa21.94■■□□□ 1.1
SFSWAP-207ENST00000538548 USP27XA6NNY8 438 aa21.93■■□□□ 1.1
SFSWAP-207ENST00000538548 NR1I2O75469 434 aa21.93■■□□□ 1.1
SFSWAP-207ENST00000538548 RBM33Q96EV2 1170 aaKnown RBP21.93■■□□□ 1.1
SFSWAP-207ENST00000538548 TIGD1Q96MW7 591 aa21.93■■□□□ 1.1
SFSWAP-207ENST00000538548 HSP90AB4PQ58FF6 505 aa21.93■■□□□ 1.1
SFSWAP-207ENST00000538548 NECTIN2Q92692 538 aa21.93■■□□□ 1.1
SFSWAP-207ENST00000538548 GOLGA6L19H0YKK7 550 aa21.92■■□□□ 1.1
SFSWAP-207ENST00000538548 SKILP12757 684 aa21.92■■□□□ 1.1
SFSWAP-207ENST00000538548 KCNJ4P48050 445 aa21.92■■□□□ 1.1
SFSWAP-207ENST00000538548 TFIP11Q9UBB9 837 aaKnown RBP21.92■■□□□ 1.1
SFSWAP-207ENST00000538548 NRXN3Q9Y4C0 1643 aa21.92■■□□□ 1.1
SFSWAP-207ENST00000538548 RNF20Q5VTR2 975 aa21.92■■□□□ 1.1
SFSWAP-207ENST00000538548 BICD2Q8TD16 824 aa21.92■■□□□ 1.1
SFSWAP-207ENST00000538548 IQCB1Q15051 598 aa21.91■■□□□ 1.1
SFSWAP-207ENST00000538548 ELF2Q15723 593 aa21.91■■□□□ 1.1
SFSWAP-207ENST00000538548 HTATSF1O43719 755 aaKnown RBP21.91■■□□□ 1.1
SFSWAP-207ENST00000538548 PSMA5P28066 241 aa21.91■■□□□ 1.1
SFSWAP-207ENST00000538548 IRX5P78411 483 aaPredicted RBP21.91■■□□□ 1.1
SFSWAP-207ENST00000538548 KCND1Q9NSA2 647 aa21.91■■□□□ 1.1
SFSWAP-207ENST00000538548 CALCOCO1Q9P1Z2 691 aa21.91■■□□□ 1.1
SFSWAP-207ENST00000538548 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.91■■□□□ 1.1
SFSWAP-207ENST00000538548 V9GYY5 206 aaPredicted RBP21.91■■□□□ 1.1
SFSWAP-207ENST00000538548 KDRP35968 1356 aa21.9■■□□□ 1.1
SFSWAP-207ENST00000538548 LRRC37A3O60309 1634 aa21.9■■□□□ 1.1
SFSWAP-207ENST00000538548 KIF2AO00139 706 aaPredicted RBP21.9■■□□□ 1.1
SFSWAP-207ENST00000538548 SLU7O95391 586 aaKnown RBP21.9■■□□□ 1.1
SFSWAP-207ENST00000538548 CDK11BP21127 795 aaKnown RBP21.9■■□□□ 1.1
SFSWAP-207ENST00000538548 ANKRD1Q15327 319 aa21.9■■□□□ 1.1
SFSWAP-207ENST00000538548 CREB3L3Q68CJ9 461 aa21.9■■□□□ 1.1
SFSWAP-207ENST00000538548 PGBD1Q96JS3 809 aa21.9■■□□□ 1.1
SFSWAP-207ENST00000538548 UBR1Q8IWV7 1749 aa21.9■■□□□ 1.1
SFSWAP-207ENST00000538548 RIMS1Q86UR5 1692 aaKnown RBP21.9■■□□□ 1.1
SFSWAP-207ENST00000538548 ZBTB22O15209 634 aa21.9■■□□□ 1.1
SFSWAP-207ENST00000538548 RBM8AQ9Y5S9 174 aaKnown RBP21.9■■□□□ 1.1
SFSWAP-207ENST00000538548 NALCNQ8IZF0 1738 aa21.89■■□□□ 1.1
SFSWAP-207ENST00000538548 DDX54Q8TDD1 881 aaKnown RBP21.89■■□□□ 1.09
SFSWAP-207ENST00000538548 FER1L4A9Z1Z3 1794 aa21.89■■□□□ 1.09
SFSWAP-207ENST00000538548 GIGYF1O75420 1035 aaPredicted RBP21.89■■□□□ 1.09
SFSWAP-207ENST00000538548 HDGFP51858 240 aaKnown RBP21.89■■□□□ 1.09
SFSWAP-207ENST00000538548 ARID5BQ14865 1188 aa21.89■■□□□ 1.09
SFSWAP-207ENST00000538548 LARP1Q6PKG0 1096 aaKnown RBP21.89■■□□□ 1.09
SFSWAP-207ENST00000538548 ROBO2Q9HCK4 1378 aa21.88■■□□□ 1.09
SFSWAP-207ENST00000538548 CCAR2Q8N163 923 aaKnown RBP21.88■■□□□ 1.09
SFSWAP-207ENST00000538548 BCL11BQ9C0K0 894 aaPredicted RBP21.88■■□□□ 1.09
SFSWAP-207ENST00000538548 EID1Q9Y6B2 187 aa21.88■■□□□ 1.09
SFSWAP-207ENST00000538548 ERBB3P21860 1342 aa21.88■■□□□ 1.09
SFSWAP-207ENST00000538548 PRR36Q9H6K5 1346 aa21.88■■□□□ 1.09
SFSWAP-207ENST00000538548 CCZ1BP86790 482 aa21.88■■□□□ 1.09
SFSWAP-207ENST00000538548 CCZ1P86791 482 aaPredicted RBP21.88■■□□□ 1.09
SFSWAP-207ENST00000538548 USP31Q70CQ4 1352 aa21.88■■□□□ 1.09
SFSWAP-207ENST00000538548 CCDC69A6NI79 296 aa21.87■■□□□ 1.09
SFSWAP-207ENST00000538548 MAP4K1Q92918 833 aa21.87■■□□□ 1.09
SFSWAP-207ENST00000538548 ECHDC1Q9NTX5 307 aa21.87■■□□□ 1.09
SFSWAP-207ENST00000538548 ALDH8A1Q9H2A2 487 aaPredicted RBP21.87■■□□□ 1.09
SFSWAP-207ENST00000538548 SLC20A2Q08357 652 aa21.86■■□□□ 1.09
SFSWAP-207ENST00000538548 STX1AQ16623 288 aa21.86■■□□□ 1.09
SFSWAP-207ENST00000538548 CLASRPQ8N2M8 674 aaKnown RBP21.86■■□□□ 1.09
SFSWAP-207ENST00000538548 EVI5LQ96CN4 794 aa21.86■■□□□ 1.09
SFSWAP-207ENST00000538548 SIRT1Q96EB6 747 aa21.86■■□□□ 1.09
SFSWAP-207ENST00000538548 ZNF446Q9NWS9 450 aa21.86■■□□□ 1.09
SFSWAP-207ENST00000538548 ADAMTS13Q76LX8 1427 aa21.86■■□□□ 1.09
SFSWAP-207ENST00000538548 BMS1Q14692 1282 aaKnown RBP21.85■■□□□ 1.09
SFSWAP-207ENST00000538548 BLOC1S2Q6QNY1 142 aa21.85■■□□□ 1.09
SFSWAP-207ENST00000538548 GPATCH3Q96I76 525 aa21.85■■□□□ 1.09
SFSWAP-207ENST00000538548 CTAGE5O15320 804 aa21.85■■□□□ 1.09
SFSWAP-207ENST00000538548 NBPF7P0C2Y1 421 aaPredicted RBP21.85■■□□□ 1.09
SFSWAP-207ENST00000538548 OS9Q13438 667 aaPredicted RBP21.85■■□□□ 1.09
SFSWAP-207ENST00000538548 C11orf57Q6ZUT1 292 aaPredicted RBP21.85■■□□□ 1.09
SFSWAP-207ENST00000538548 ERICH4A6NGS2 130 aa21.84■■□□□ 1.09
SFSWAP-207ENST00000538548 SLC27A2O14975 620 aa21.84■■□□□ 1.09
SFSWAP-207ENST00000538548 H2AFXP16104 143 aaPredicted RBP21.84■■□□□ 1.09
SFSWAP-207ENST00000538548 TRMT1Q9NXH9 659 aaKnown RBP21.84■■□□□ 1.09
SFSWAP-207ENST00000538548 USP16Q9Y5T5 823 aa21.84■■□□□ 1.09
SFSWAP-207ENST00000538548 PHAXQ9H814 394 aaKnown RBP21.84■■□□□ 1.09
SFSWAP-207ENST00000538548 BABAM1Q9NWV8 329 aa21.84■■□□□ 1.09
SFSWAP-207ENST00000538548 FMN2Q9NZ56 1722 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms