RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.77□□□□□ -0.37
CD9-207ENST00000538418 PARP3Q9Y6F1 533 aa12.77□□□□□ -0.37
CD9-207ENST00000538418 GJA8P48165 433 aa12.76□□□□□ -0.37
CD9-207ENST00000538418 PTPN5P54829 565 aa12.76□□□□□ -0.37
CD9-207ENST00000538418 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.76□□□□□ -0.37
CD9-207ENST00000538418 POTEMA6NI47 508 aa12.75□□□□□ -0.37
CD9-207ENST00000538418 CLN3Q13286 438 aa12.75□□□□□ -0.37
CD9-207ENST00000538418 TAF1CQ15572 869 aaPredicted RBP12.75□□□□□ -0.37
CD9-207ENST00000538418 OSBPL7Q9BZF2 842 aa12.75□□□□□ -0.37
CD9-207ENST00000538418 FHDC1Q9C0D6 1143 aaPredicted RBP12.75□□□□□ -0.37
CD9-207ENST00000538418 RNF223E7ERA6 249 aa12.74□□□□□ -0.37
CD9-207ENST00000538418 ATF4P18848 351 aaPredicted RBP12.74□□□□□ -0.37
CD9-207ENST00000538418 C1orf53Q5VUE5 145 aa12.74□□□□□ -0.37
CD9-207ENST00000538418 ANKLE1Q8NAG6 615 aa12.74□□□□□ -0.37
CD9-207ENST00000538418 ADH1AP07327 375 aa12.73□□□□□ -0.37
CD9-207ENST00000538418 CENPCQ03188 943 aa12.73□□□□□ -0.37
CD9-207ENST00000538418 MEI1Q5TIA1 1274 aa12.73□□□□□ -0.37
CD9-207ENST00000538418 ZNF746Q6NUN9 644 aaPredicted RBP12.73□□□□□ -0.37
CD9-207ENST00000538418 NLGN1Q8N2Q7 840 aa12.73□□□□□ -0.37
CD9-207ENST00000538418 CCDC74AQ96AQ1 378 aa12.73□□□□□ -0.37
CD9-207ENST00000538418 NR3C2P08235 984 aa12.72□□□□□ -0.37
CD9-207ENST00000538418 RPIAP49247 311 aa12.72□□□□□ -0.37
CD9-207ENST00000538418 ST13P50502 369 aaKnown RBP12.72□□□□□ -0.37
CD9-207ENST00000538418 PAK2Q13177 524 aa12.72□□□□□ -0.37
CD9-207ENST00000538418 PI16Q6UXB8 463 aa12.72□□□□□ -0.37
CD9-207ENST00000538418 FAM163AQ96GL9 167 aaPredicted RBP12.72□□□□□ -0.37
CD9-207ENST00000538418 V9GY48 417 aaPredicted RBP12.72□□□□□ -0.37
CD9-207ENST00000538418 THOC2Q8NI27 1593 aaKnown RBP12.72□□□□□ -0.37
CD9-207ENST00000538418 SIAH2O43255 324 aa12.71□□□□□ -0.37
CD9-207ENST00000538418 PPARGC1BQ86YN6 1023 aaKnown RBP12.71□□□□□ -0.37
CD9-207ENST00000538418 FAM8A1Q9UBU6 413 aa12.71□□□□□ -0.37
CD9-207ENST00000538418 BCS1LQ9Y276 419 aa12.71□□□□□ -0.37
CD9-207ENST00000538418 BMS1Q14692 1282 aaKnown RBP12.7□□□□□ -0.38
CD9-207ENST00000538418 USPL1Q5W0Q7 1092 aa12.7□□□□□ -0.38
CD9-207ENST00000538418 KDF1Q8NAX2 398 aaPredicted RBP12.7□□□□□ -0.38
CD9-207ENST00000538418 EPS8L3Q8TE67 593 aaKnown RBP12.7□□□□□ -0.38
CD9-207ENST00000538418 GPRASP2Q96D09 838 aa12.7□□□□□ -0.38
CD9-207ENST00000538418 NIFKQ9BYG3 293 aaKnown RBP12.7□□□□□ -0.38
CD9-207ENST00000538418 MICAL2O94851 1124 aa12.69□□□□□ -0.38
CD9-207ENST00000538418 IRS1P35568 1242 aa12.69□□□□□ -0.38
CD9-207ENST00000538418 ERMP1Q7Z2K6 904 aa12.69□□□□□ -0.38
CD9-207ENST00000538418 SPACA7Q96KW9 195 aa12.69□□□□□ -0.38
CD9-207ENST00000538418 TNFRSF21O75509 655 aa12.68□□□□□ -0.38
CD9-207ENST00000538418 USP17L7P0C7H9 530 aa12.68□□□□□ -0.38
CD9-207ENST00000538418 NFE2L2Q16236 605 aa12.68□□□□□ -0.38
CD9-207ENST00000538418 JAZF1Q86VZ6 243 aa12.68□□□□□ -0.38
CD9-207ENST00000538418 CWC22Q9HCG8 908 aaKnown RBP12.68□□□□□ -0.38
CD9-207ENST00000538418 FOXD3Q9UJU5 478 aaPredicted RBP12.68□□□□□ -0.38
CD9-207ENST00000538418 MRC2Q9UBG0 1479 aa12.67□□□□□ -0.38
CD9-207ENST00000538418 CD2BP2O95400 341 aaKnown RBP12.67□□□□□ -0.38
CD9-207ENST00000538418 XKR5Q6UX68 686 aa12.67□□□□□ -0.38
CD9-207ENST00000538418 ZSCAN10Q96SZ4 725 aaPredicted RBP12.67□□□□□ -0.38
CD9-207ENST00000538418 SRCIN1Q9C0H9 1055 aa12.67□□□□□ -0.38
CD9-207ENST00000538418 TXLNAP40222 546 aa12.66□□□□□ -0.38
CD9-207ENST00000538418 TCEAL1Q15170 157 aa12.66□□□□□ -0.38
CD9-207ENST00000538418 HIF1AQ16665 826 aa12.66□□□□□ -0.38
CD9-207ENST00000538418 RASGRP4Q8TDF6 673 aa12.66□□□□□ -0.38
CD9-207ENST00000538418 NLRP3Q96P20 1036 aa12.66□□□□□ -0.38
CD9-207ENST00000538418 TGFBR3LH3BV60 316 aa12.65□□□□□ -0.38
CD9-207ENST00000538418 GGCXP38435 758 aa12.65□□□□□ -0.38
CD9-207ENST00000538418 CKAP2LQ8IYA6 745 aa12.65□□□□□ -0.38
CD9-207ENST00000538418 SNX29Q8TEQ0 813 aa12.65□□□□□ -0.38
CD9-207ENST00000538418 MRFAP1L1Q96HT8 127 aa12.65□□□□□ -0.38
CD9-207ENST00000538418 ZFYVE28Q9HCC9 887 aa12.65□□□□□ -0.38
CD9-207ENST00000538418 MEN1O00255 615 aa12.64□□□□□ -0.39
CD9-207ENST00000538418 PTGIRP43119 386 aa12.64□□□□□ -0.39
CD9-207ENST00000538418 TMEM214Q6NUQ4 689 aaKnown RBP12.64□□□□□ -0.39
CD9-207ENST00000538418 RHBDD1Q8TEB9 315 aa12.64□□□□□ -0.39
CD9-207ENST00000538418 NEUROD4Q9HD90 331 aa12.64□□□□□ -0.39
CD9-207ENST00000538418 COPRSQ9NQ92 184 aa12.64□□□□□ -0.39
CD9-207ENST00000538418 DMGDHQ9UI17 866 aaKnown RBP12.64□□□□□ -0.39
CD9-207ENST00000538418 NBPF6Q5VWK0 638 aa12.63□□□□□ -0.39
CD9-207ENST00000538418 RHPN1Q8TCX5 695 aa12.63□□□□□ -0.39
CD9-207ENST00000538418 GPATCH3Q96I76 525 aa12.63□□□□□ -0.39
CD9-207ENST00000538418 NBPF4Q96M43 638 aa12.63□□□□□ -0.39
CD9-207ENST00000538418 CFTRP13569 1480 aa12.62□□□□□ -0.39
CD9-207ENST00000538418 CLSTN1O94985 981 aa12.62□□□□□ -0.39
CD9-207ENST00000538418 GTF2E1P29083 439 aaPredicted RBP12.62□□□□□ -0.39
CD9-207ENST00000538418 CBLBQ13191 982 aa12.62□□□□□ -0.39
CD9-207ENST00000538418 NXPE4Q6UWF7 544 aa12.62□□□□□ -0.39
CD9-207ENST00000538418 ZNF438Q7Z4V0 828 aa12.62□□□□□ -0.39
CD9-207ENST00000538418 FNDC3AQ9Y2H6 1198 aaKnown RBP12.62□□□□□ -0.39
CD9-207ENST00000538418 WDR62O43379 1518 aa12.62□□□□□ -0.39
CD9-207ENST00000538418 K7ELQ4 463 aaPredicted RBP12.61□□□□□ -0.39
CD9-207ENST00000538418 HSD3B2P26439 372 aa12.61□□□□□ -0.39
CD9-207ENST00000538418 PDE12Q6L8Q7 609 aaKnown RBP12.61□□□□□ -0.39
CD9-207ENST00000538418 SEC16BQ96JE7 1060 aa12.61□□□□□ -0.39
CD9-207ENST00000538418 NPHS2Q9NP85 383 aa12.61□□□□□ -0.39
CD9-207ENST00000538418 MRPL42Q9Y6G3 142 aaKnown RBP12.61□□□□□ -0.39
CD9-207ENST00000538418 PHACTR2O75167 634 aa12.6□□□□□ -0.39
CD9-207ENST00000538418 SSBP05455 408 aaKnown RBP eCLIP12.6□□□□□ -0.39
CD9-207ENST00000538418 PTPROQ16827 1216 aa12.6□□□□□ -0.39
CD9-207ENST00000538418 IER5Q5VY09 327 aa12.6□□□□□ -0.39
CD9-207ENST00000538418 C7orf43Q8WVR3 580 aa12.6□□□□□ -0.39
CD9-207ENST00000538418 SPON2Q9BUD6 331 aa12.6□□□□□ -0.39
CD9-207ENST00000538418 BCO2Q9BYV7 579 aa12.6□□□□□ -0.39
CD9-207ENST00000538418 KBTBD4Q9NVX7 518 aa12.6□□□□□ -0.39
CD9-207ENST00000538418 KIF21AQ7Z4S6 1674 aa12.6□□□□□ -0.39
CD9-207ENST00000538418 CEP164Q9UPV0 1460 aa12.59□□□□□ -0.39
CD9-207ENST00000538418 XRCC5P13010 732 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms