RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 C4AP0C0L4 1744 aa25.84■■□□□ 1.73
COPS7A-208ENST00000538410 COL15A1P39059 1388 aa25.84■■□□□ 1.73
COPS7A-208ENST00000538410 NEURL1BA8MQ27 555 aa25.83■■□□□ 1.73
COPS7A-208ENST00000538410 NLGN1Q8N2Q7 840 aa25.83■■□□□ 1.73
COPS7A-208ENST00000538410 PELP1Q8IZL8 1130 aaKnown RBP25.82■■□□□ 1.72
COPS7A-208ENST00000538410 ERVV-1B6SEH8 477 aa25.81■■□□□ 1.72
COPS7A-208ENST00000538410 GIGYF2Q6Y7W6 1299 aaKnown RBP25.81■■□□□ 1.72
COPS7A-208ENST00000538410 TBC1D2BQ9UPU7 963 aa25.81■■□□□ 1.72
COPS7A-208ENST00000538410 MMP10P09238 476 aa25.81■■□□□ 1.72
COPS7A-208ENST00000538410 CHD4Q14839 1912 aa25.8■■□□□ 1.72
COPS7A-208ENST00000538410 KDM2BQ8NHM5 1336 aa25.8■■□□□ 1.72
COPS7A-208ENST00000538410 A0A087WZG4 1122 aa25.8■■□□□ 1.72
COPS7A-208ENST00000538410 ATP5J2-PTCD1G3V325 749 aa25.8■■□□□ 1.72
COPS7A-208ENST00000538410 GNAI2P04899 355 aa25.8■■□□□ 1.72
COPS7A-208ENST00000538410 UBTFL1P0CB47 393 aaPredicted RBP25.8■■□□□ 1.72
COPS7A-208ENST00000538410 GYS1P13807 737 aa25.8■■□□□ 1.72
COPS7A-208ENST00000538410 TCIRG1Q13488 830 aa25.8■■□□□ 1.72
COPS7A-208ENST00000538410 C9orf78Q9NZ63 289 aaPredicted RBP25.8■■□□□ 1.72
COPS7A-208ENST00000538410 IGHDP01880 384 aa25.79■■□□□ 1.72
COPS7A-208ENST00000538410 GCKRQ14397 625 aa25.79■■□□□ 1.72
COPS7A-208ENST00000538410 SCN7AQ01118 1682 aa25.79■■□□□ 1.72
COPS7A-208ENST00000538410 UTYO14607 1347 aa25.78■■□□□ 1.72
COPS7A-208ENST00000538410 NBPF7P0C2Y1 421 aaPredicted RBP25.78■■□□□ 1.72
COPS7A-208ENST00000538410 HLFQ16534 295 aa25.78■■□□□ 1.72
COPS7A-208ENST00000538410 RWDD1Q9H446 243 aaPredicted RBP25.78■■□□□ 1.72
COPS7A-208ENST00000538410 GRM8O00222 908 aa25.77■■□□□ 1.72
COPS7A-208ENST00000538410 HDAC1Q13547 482 aaPredicted RBP25.77■■□□□ 1.72
COPS7A-208ENST00000538410 HSP90AB3PQ58FF7 597 aa25.77■■□□□ 1.72
COPS7A-208ENST00000538410 CENPQQ7L2Z9 268 aaPredicted RBP25.77■■□□□ 1.72
COPS7A-208ENST00000538410 ISCA1Q9BUE6 129 aa25.77■■□□□ 1.72
COPS7A-208ENST00000538410 CAMTA2O94983 1202 aa25.77■■□□□ 1.72
COPS7A-208ENST00000538410 TRIM28Q13263 835 aaKnown RBP25.76■■□□□ 1.71
COPS7A-208ENST00000538410 RPAP2Q8IXW5 612 aaPredicted RBP25.76■■□□□ 1.71
COPS7A-208ENST00000538410 CCDC191Q8NCU4 936 aa25.76■■□□□ 1.71
COPS7A-208ENST00000538410 USP42Q9H9J4 1324 aaKnown RBP25.75■■□□□ 1.71
COPS7A-208ENST00000538410 CWC25Q9NXE8 425 aaPredicted RBP25.75■■□□□ 1.71
COPS7A-208ENST00000538410 SRP68Q9UHB9 627 aaKnown RBP25.75■■□□□ 1.71
COPS7A-208ENST00000538410 LRRFIP2Q9Y608 721 aaKnown RBP25.75■■□□□ 1.71
COPS7A-208ENST00000538410 CEP85Q6P2H3 762 aa25.74■■□□□ 1.71
COPS7A-208ENST00000538410 SIRT2Q8IXJ6 389 aa25.74■■□□□ 1.71
COPS7A-208ENST00000538410 ANKRD44Q8N8A2 993 aa25.74■■□□□ 1.71
COPS7A-208ENST00000538410 HDAC5Q9UQL6 1122 aa25.74■■□□□ 1.71
COPS7A-208ENST00000538410 ZPR1O75312 459 aa25.73■■□□□ 1.71
COPS7A-208ENST00000538410 PARP3Q9Y6F1 533 aa25.73■■□□□ 1.71
COPS7A-208ENST00000538410 RGL2O15211 777 aa25.71■■□□□ 1.71
COPS7A-208ENST00000538410 YBX3P16989 372 aaKnown RBP eCLIP25.71■■□□□ 1.71
COPS7A-208ENST00000538410 KIF13BQ9NQT8 1826 aa25.71■■□□□ 1.71
COPS7A-208ENST00000538410 GRIN3BO60391 1043 aa25.7■■□□□ 1.71
COPS7A-208ENST00000538410 ZNF34Q8IZ26 560 aa25.7■■□□□ 1.71
COPS7A-208ENST00000538410 NARFQ9UHQ1 456 aa25.7■■□□□ 1.71
COPS7A-208ENST00000538410 ZNF652Q9Y2D9 606 aa25.7■■□□□ 1.71
COPS7A-208ENST00000538410 H7C1W4 665 aa25.7■■□□□ 1.7
COPS7A-208ENST00000538410 USPL1Q5W0Q7 1092 aa25.7■■□□□ 1.7
COPS7A-208ENST00000538410 CLEC4GQ6UXB4 293 aa25.7■■□□□ 1.7
COPS7A-208ENST00000538410 GPTP24298 496 aa25.69■■□□□ 1.7
COPS7A-208ENST00000538410 CASP7P55210 303 aa25.69■■□□□ 1.7
COPS7A-208ENST00000538410 ATP8B2P98198 1209 aa25.69■■□□□ 1.7
COPS7A-208ENST00000538410 UBE3BQ7Z3V4 1068 aa25.69■■□□□ 1.7
COPS7A-208ENST00000538410 NLRP10Q86W26 655 aa25.69■■□□□ 1.7
COPS7A-208ENST00000538410 SUCLG2Q96I99 432 aa25.69■■□□□ 1.7
COPS7A-208ENST00000538410 KAZALD1Q96I82 304 aa25.67■■□□□ 1.7
COPS7A-208ENST00000538410 UTRNP46939 3433 aa25.67■■□□□ 1.7
COPS7A-208ENST00000538410 JARID2Q92833 1246 aaPredicted RBP25.66■■□□□ 1.7
COPS7A-208ENST00000538410 MYH3P11055 1940 aa25.66■■□□□ 1.7
COPS7A-208ENST00000538410 HMMRO75330 724 aa25.66■■□□□ 1.7
COPS7A-208ENST00000538410 UBN2Q6ZU65 1347 aa25.66■■□□□ 1.7
COPS7A-208ENST00000538410 C10orf71Q711Q0 1435 aa25.65■■□□□ 1.7
COPS7A-208ENST00000538410 PCCAP05165 728 aaPredicted RBP25.65■■□□□ 1.7
COPS7A-208ENST00000538410 TGFB2P61812 414 aa25.65■■□□□ 1.7
COPS7A-208ENST00000538410 SMC5Q8IY18 1101 aa25.65■■□□□ 1.7
COPS7A-208ENST00000538410 BCL2L12Q9HB09 334 aa25.65■■□□□ 1.7
COPS7A-208ENST00000538410 PNMA6EA0A0J9YXQ4 647 aa25.64■■□□□ 1.7
COPS7A-208ENST00000538410 MTX1Q13505 466 aa25.64■■□□□ 1.7
COPS7A-208ENST00000538410 BICC1Q9H694 974 aaKnown RBP25.64■■□□□ 1.7
COPS7A-208ENST00000538410 TM4SF1P30408 202 aa25.63■■□□□ 1.69
COPS7A-208ENST00000538410 DDR1Q08345 913 aa25.63■■□□□ 1.69
COPS7A-208ENST00000538410 PARP10Q53GL7 1025 aa25.63■■□□□ 1.69
COPS7A-208ENST00000538410 PPP1R42Q7Z4L9 355 aa25.63■■□□□ 1.69
COPS7A-208ENST00000538410 ZBTB38Q8NAP3 1195 aaPredicted RBP25.63■■□□□ 1.69
COPS7A-208ENST00000538410 WWC3Q9ULE0 1092 aa25.63■■□□□ 1.69
COPS7A-208ENST00000538410 NIP7Q9Y221 180 aaKnown RBP eCLIP25.63■■□□□ 1.69
COPS7A-208ENST00000538410 KIAA1551Q9HCM1 1747 aa25.63■■□□□ 1.69
COPS7A-208ENST00000538410 RTL5Q5HYW3 569 aaPredicted RBP25.63■■□□□ 1.69
COPS7A-208ENST00000538410 SSH3Q8TE77 659 aa25.63■■□□□ 1.69
COPS7A-208ENST00000538410 GCC1Q96CN9 775 aa25.63■■□□□ 1.69
COPS7A-208ENST00000538410 GOLGB1Q14789 3259 aaKnown RBP25.62■■□□□ 1.69
COPS7A-208ENST00000538410 DCTPP1Q9H773 170 aa25.62■■□□□ 1.69
COPS7A-208ENST00000538410 LAMB2P55268 1798 aa25.62■■□□□ 1.69
COPS7A-208ENST00000538410 POLA2Q14181 598 aa25.61■■□□□ 1.69
COPS7A-208ENST00000538410 EPHA10Q5JZY3 1008 aa25.61■■□□□ 1.69
COPS7A-208ENST00000538410 FAM89AQ96GI7 184 aa25.61■■□□□ 1.69
COPS7A-208ENST00000538410 TRMT112Q9UI30 125 aaKnown RBP25.61■■□□□ 1.69
COPS7A-208ENST00000538410 CDHR2Q9BYE9 1310 aa25.6■■□□□ 1.69
COPS7A-208ENST00000538410 POLRMTO00411 1230 aaKnown RBP25.6■■□□□ 1.69
COPS7A-208ENST00000538410 SRGAP3O43295 1099 aa25.6■■□□□ 1.69
COPS7A-208ENST00000538410 DDX60Q8IY21 1712 aaKnown RBP25.6■■□□□ 1.69
COPS7A-208ENST00000538410 A0A0G2JLW4 131 aa25.59■■□□□ 1.69
COPS7A-208ENST00000538410 RABL6Q3YEC7 729 aaPredicted RBP25.59■■□□□ 1.69
COPS7A-208ENST00000538410 SUSD4Q5VX71 490 aa25.59■■□□□ 1.69
COPS7A-208ENST00000538410 FOXO4P98177 505 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms