RNA–Protein interactions for RNA: ENST00000538361.1

C2CD3-211, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 863 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-211ENST00000538361 RNF123Q5XPI4 1314 aa17.21■□□□□ 0.34
C2CD3-211ENST00000538361 LTBP3Q9NS15 1303 aa17.21■□□□□ 0.34
C2CD3-211ENST00000538361 ABCC12Q96J65 1359 aa17.2■□□□□ 0.34
C2CD3-211ENST00000538361 SENP3-EIF4A1A0A087X0R7 540 aa17.2■□□□□ 0.34
C2CD3-211ENST00000538361 NTSR2O95665 410 aa17.2■□□□□ 0.34
C2CD3-211ENST00000538361 CCDC93Q567U6 631 aa17.2■□□□□ 0.34
C2CD3-211ENST00000538361 ANKRD13DQ6ZTN6 518 aa17.2■□□□□ 0.34
C2CD3-211ENST00000538361 PLBD2Q8NHP8 589 aa17.2■□□□□ 0.34
C2CD3-211ENST00000538361 DICER1Q9UPY3 1922 aaKnown RBP17.19■□□□□ 0.34
C2CD3-211ENST00000538361 ELL2O00472 640 aaPredicted RBP17.19■□□□□ 0.34
C2CD3-211ENST00000538361 TOMM70O94826 608 aa17.19■□□□□ 0.34
C2CD3-211ENST00000538361 WWC1Q8IX03 1113 aa17.19■□□□□ 0.34
C2CD3-211ENST00000538361 RTKN2Q8IZC4 609 aa17.19■□□□□ 0.34
C2CD3-211ENST00000538361 C7orf43Q8WVR3 580 aa17.19■□□□□ 0.34
C2CD3-211ENST00000538361 NLRP3Q96P20 1036 aa17.19■□□□□ 0.34
C2CD3-211ENST00000538361 NMRK2Q9NPI5 230 aa17.19■□□□□ 0.34
C2CD3-211ENST00000538361 TNRC6CQ9HCJ0 1690 aaKnown RBP17.19■□□□□ 0.34
C2CD3-211ENST00000538361 HOXA10P31260 410 aaPredicted RBP17.18■□□□□ 0.34
C2CD3-211ENST00000538361 PRELPP51888 382 aa17.18■□□□□ 0.34
C2CD3-211ENST00000538361 SLC10A5Q5PT55 438 aa17.18■□□□□ 0.34
C2CD3-211ENST00000538361 NLRP10Q86W26 655 aa17.18■□□□□ 0.34
C2CD3-211ENST00000538361 C16orf71Q8IYS4 520 aaPredicted RBP17.18■□□□□ 0.34
C2CD3-211ENST00000538361 RBM17Q96I25 401 aaKnown RBP17.18■□□□□ 0.34
C2CD3-211ENST00000538361 TIAM2Q8IVF5 1701 aa17.18■□□□□ 0.34
C2CD3-211ENST00000538361 GLTPD2A6NH11 291 aa17.17■□□□□ 0.34
C2CD3-211ENST00000538361 DPY19L2Q6NUT2 758 aa17.17■□□□□ 0.34
C2CD3-211ENST00000538361 C8orf58Q8NAV2 365 aa17.17■□□□□ 0.34
C2CD3-211ENST00000538361 TRMT112Q9UI30 125 aaKnown RBP17.17■□□□□ 0.34
C2CD3-211ENST00000538361 IL16Q14005 1332 aa17.17■□□□□ 0.34
C2CD3-211ENST00000538361 GRIPAP1Q4V328 841 aa17.16■□□□□ 0.34
C2CD3-211ENST00000538361 CCDC30Q5VVM6 783 aa17.16■□□□□ 0.34
C2CD3-211ENST00000538361 CC2D2BQ6DHV5 1058 aa17.16■□□□□ 0.34
C2CD3-211ENST00000538361 CRAMP1Q96RY5 1269 aa17.16■□□□□ 0.34
C2CD3-211ENST00000538361 RRAGCQ9HB90 399 aa17.16■□□□□ 0.34
C2CD3-211ENST00000538361 FKBP4Q02790 459 aaKnown RBP eCLIP17.15■□□□□ 0.34
C2CD3-211ENST00000538361 GOLGA2Q08379 1002 aa17.15■□□□□ 0.34
C2CD3-211ENST00000538361 RIC3Q7Z5B4 369 aa17.15■□□□□ 0.34
C2CD3-211ENST00000538361 TMX4Q9H1E5 349 aaPredicted RBP17.15■□□□□ 0.34
C2CD3-211ENST00000538361 SH3TC1Q8TE82 1336 aa17.15■□□□□ 0.34
C2CD3-211ENST00000538361 WDR63Q8IWG1 891 aa17.14■□□□□ 0.33
C2CD3-211ENST00000538361 FAM9BQ8IZU0 186 aa17.14■□□□□ 0.33
C2CD3-211ENST00000538361 TSR2Q969E8 191 aaKnown RBP17.14■□□□□ 0.33
C2CD3-211ENST00000538361 DDX58O95786 925 aaKnown RBP17.13■□□□□ 0.33
C2CD3-211ENST00000538361 VEGFAP15692 232 aaPredicted RBP17.13■□□□□ 0.33
C2CD3-211ENST00000538361 ISCA1Q9BUE6 129 aa17.13■□□□□ 0.33
C2CD3-211ENST00000538361 PPEF1O14829 653 aaPredicted RBP17.12■□□□□ 0.33
C2CD3-211ENST00000538361 HCLS1P14317 486 aaPredicted RBP17.12■□□□□ 0.33
C2CD3-211ENST00000538361 HSPA6P17066 643 aa17.12■□□□□ 0.33
C2CD3-211ENST00000538361 TRIM28Q13263 835 aaKnown RBP17.12■□□□□ 0.33
C2CD3-211ENST00000538361 OLFM4Q6UX06 510 aa17.12■□□□□ 0.33
C2CD3-211ENST00000538361 C3orf67Q6ZVT6 689 aa17.12■□□□□ 0.33
C2CD3-211ENST00000538361 RBM46Q8TBY0 533 aaKnown RBP17.12■□□□□ 0.33
C2CD3-211ENST00000538361 STK31Q9BXU1 1019 aa17.12■□□□□ 0.33
C2CD3-211ENST00000538361 PHAXQ9H814 394 aaKnown RBP17.12■□□□□ 0.33
C2CD3-211ENST00000538361 SALL2Q9Y467 1007 aaPredicted RBP17.12■□□□□ 0.33
C2CD3-211ENST00000538361 ATP5J2-PTCD1G3V325 749 aa17.11■□□□□ 0.33
C2CD3-211ENST00000538361 SYNE4Q8N205 404 aa17.11■□□□□ 0.33
C2CD3-211ENST00000538361 TSPYL6Q8N831 410 aa17.11■□□□□ 0.33
C2CD3-211ENST00000538361 PSMD1Q99460 953 aa17.11■□□□□ 0.33
C2CD3-211ENST00000538361 ZNF277Q9NRM2 450 aaPredicted RBP17.11■□□□□ 0.33
C2CD3-211ENST00000538361 LAMB2P55268 1798 aa17.1■□□□□ 0.33
C2CD3-211ENST00000538361 BBOX1O75936 387 aa17.1■□□□□ 0.33
C2CD3-211ENST00000538361 HSP90B1P14625 803 aaKnown RBP17.1■□□□□ 0.33
C2CD3-211ENST00000538361 TWISTNBQ3B726 338 aaPredicted RBP17.1■□□□□ 0.33
C2CD3-211ENST00000538361 DDX46Q7L014 1031 aaKnown RBP17.1■□□□□ 0.33
C2CD3-211ENST00000538361 IARSP41252 1262 aaKnown RBP17.09■□□□□ 0.33
C2CD3-211ENST00000538361 FSTL1Q12841 308 aa17.09■□□□□ 0.33
C2CD3-211ENST00000538361 FAM89AQ96GI7 184 aa17.09■□□□□ 0.33
C2CD3-211ENST00000538361 ATP6V0A2Q9Y487 856 aa17.09■□□□□ 0.33
C2CD3-211ENST00000538361 WDR90Q96KV7 1748 aa17.08■□□□□ 0.32
C2CD3-211ENST00000538361 ABCC4O15439 1325 aa17.08■□□□□ 0.32
C2CD3-211ENST00000538361 TCERG1O14776 1098 aaKnown RBP17.08■□□□□ 0.32
C2CD3-211ENST00000538361 JDP2Q8WYK2 163 aa17.08■□□□□ 0.32
C2CD3-211ENST00000538361 MYD88Q99836 296 aa17.08■□□□□ 0.32
C2CD3-211ENST00000538361 CEP350Q5VT06 3117 aa17.07■□□□□ 0.32
C2CD3-211ENST00000538361 FANCIQ9NVI1 1328 aa17.07■□□□□ 0.32
C2CD3-211ENST00000538361 ZBTB38Q8NAP3 1195 aaPredicted RBP17.07■□□□□ 0.32
C2CD3-211ENST00000538361 CCDC191Q8NCU4 936 aa17.07■□□□□ 0.32
C2CD3-211ENST00000538361 ZNF428Q96B54 188 aa17.07■□□□□ 0.32
C2CD3-211ENST00000538361 CACNA1FO60840 1977 aa17.06■□□□□ 0.32
C2CD3-211ENST00000538361 SF3B3Q15393 1217 aaKnown RBP17.06■□□□□ 0.32
C2CD3-211ENST00000538361 KSR2Q6VAB6 950 aa17.06■□□□□ 0.32
C2CD3-211ENST00000538361 TMC4Q7Z404 712 aa17.06■□□□□ 0.32
C2CD3-211ENST00000538361 SP8Q8IXZ3 490 aa17.06■□□□□ 0.32
C2CD3-211ENST00000538361 SMC1BQ8NDV3 1235 aa17.06■□□□□ 0.32
C2CD3-211ENST00000538361 METTL22Q9BUU2 404 aaPredicted RBP17.06■□□□□ 0.32
C2CD3-211ENST00000538361 MYH16Q9H6N6 1097 aa17.06■□□□□ 0.32
C2CD3-211ENST00000538361 CWC25Q9NXE8 425 aaPredicted RBP17.06■□□□□ 0.32
C2CD3-211ENST00000538361 MAP3K2Q9Y2U5 619 aa17.06■□□□□ 0.32
C2CD3-211ENST00000538361 DDX60Q8IY21 1712 aaKnown RBP17.06■□□□□ 0.32
C2CD3-211ENST00000538361 SNED1Q8TER0 1413 aa17.05■□□□□ 0.32
C2CD3-211ENST00000538361 IQCA1LA6NCM1 817 aa17.05■□□□□ 0.32
C2CD3-211ENST00000538361 IRS4O14654 1257 aaPredicted RBP17.05■□□□□ 0.32
C2CD3-211ENST00000538361 DDNO94850 711 aaPredicted RBP17.05■□□□□ 0.32
C2CD3-211ENST00000538361 SLC4A2P04920 1241 aa17.05■□□□□ 0.32
C2CD3-211ENST00000538361 APLP1P51693 650 aa17.05■□□□□ 0.32
C2CD3-211ENST00000538361 NEXNQ0ZGT2 675 aa17.05■□□□□ 0.32
C2CD3-211ENST00000538361 GRAPQ13588 217 aa17.05■□□□□ 0.32
C2CD3-211ENST00000538361 RTL5Q5HYW3 569 aaPredicted RBP17.05■□□□□ 0.32
C2CD3-211ENST00000538361 SUPT20HQ8NEM7 779 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms