RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 CRAMP1Q96RY5 1269 aa4.45□□□□□ -1.7
PTPN22-211ENST00000538253 TRMT112Q9UI30 125 aaKnown RBP4.45□□□□□ -1.7
PTPN22-211ENST00000538253 DDX19BQ9UMR2 479 aa4.45□□□□□ -1.7
PTPN22-211ENST00000538253 RBM19Q9Y4C8 960 aaKnown RBP4.45□□□□□ -1.7
PTPN22-211ENST00000538253 PNPLA7Q6ZV29 1317 aa4.45□□□□□ -1.7
PTPN22-211ENST00000538253 ZNF521Q96K83 1311 aa4.45□□□□□ -1.7
PTPN22-211ENST00000538253 G3V3G9 751 aa4.45□□□□□ -1.7
PTPN22-211ENST00000538253 PHF14O94880 888 aa4.45□□□□□ -1.7
PTPN22-211ENST00000538253 ITPK1Q13572 414 aa4.45□□□□□ -1.7
PTPN22-211ENST00000538253 DCTN1Q14203 1278 aa4.45□□□□□ -1.7
PTPN22-211ENST00000538253 LRRFIP1Q32MZ4 808 aaKnown RBP4.45□□□□□ -1.7
PTPN22-211ENST00000538253 SLC10A5Q5PT55 438 aa4.45□□□□□ -1.7
PTPN22-211ENST00000538253 DCAF8Q5TAQ9 597 aa4.45□□□□□ -1.7
PTPN22-211ENST00000538253 INTS5Q6P9B9 1019 aaKnown RBP4.45□□□□□ -1.7
PTPN22-211ENST00000538253 COPS6Q7L5N1 327 aa4.45□□□□□ -1.7
PTPN22-211ENST00000538253 BTAF1O14981 1849 aa4.45□□□□□ -1.7
PTPN22-211ENST00000538253 PDE8AO60658 829 aa4.45□□□□□ -1.7
PTPN22-211ENST00000538253 MMP10P09238 476 aa4.45□□□□□ -1.7
PTPN22-211ENST00000538253 DALRD3Q5D0E6 543 aaKnown RBP4.45□□□□□ -1.7
PTPN22-211ENST00000538253 CHRDL2Q6WN34 429 aa4.45□□□□□ -1.7
PTPN22-211ENST00000538253 QSER1Q2KHR3 1735 aa4.44□□□□□ -1.7
PTPN22-211ENST00000538253 RREB1Q92766 1687 aa4.44□□□□□ -1.7
PTPN22-211ENST00000538253 VAMP4O75379 141 aa4.44□□□□□ -1.7
PTPN22-211ENST00000538253 CAMTA2O94983 1202 aa4.44□□□□□ -1.7
PTPN22-211ENST00000538253 CCDC93Q567U6 631 aa4.44□□□□□ -1.7
PTPN22-211ENST00000538253 FAM182BQ5T319 152 aa4.44□□□□□ -1.7
PTPN22-211ENST00000538253 USPL1Q5W0Q7 1092 aa4.44□□□□□ -1.7
PTPN22-211ENST00000538253 COL23A1Q86Y22 540 aaPredicted RBP4.44□□□□□ -1.7
PTPN22-211ENST00000538253 TTLL6Q8N841 843 aa4.44□□□□□ -1.7
PTPN22-211ENST00000538253 KCPQ6ZWJ8 1503 aa4.44□□□□□ -1.7
PTPN22-211ENST00000538253 TNS1Q9HBL0 1735 aaKnown RBP4.44□□□□□ -1.7
PTPN22-211ENST00000538253 HMGB1P09429 215 aaKnown RBP4.44□□□□□ -1.7
PTPN22-211ENST00000538253 UBTFL1P0CB47 393 aaPredicted RBP4.44□□□□□ -1.7
PTPN22-211ENST00000538253 MYL6BP14649 208 aa4.44□□□□□ -1.7
PTPN22-211ENST00000538253 ZBTB38Q8NAP3 1195 aaPredicted RBP4.44□□□□□ -1.7
PTPN22-211ENST00000538253 GNL3LQ9NVN8 582 aaKnown RBP4.44□□□□□ -1.7
PTPN22-211ENST00000538253 CHPF2Q9P2E5 772 aa4.44□□□□□ -1.7
PTPN22-211ENST00000538253 RCAN3Q9UKA8 241 aa4.44□□□□□ -1.7
PTPN22-211ENST00000538253 USP16Q9Y5T5 823 aa4.44□□□□□ -1.7
PTPN22-211ENST00000538253 BRWD3Q6RI45 1802 aa4.44□□□□□ -1.7
PTPN22-211ENST00000538253 ANKRD18BA2A2Z9 1011 aa4.44□□□□□ -1.7
PTPN22-211ENST00000538253 A1BGP04217 495 aa4.44□□□□□ -1.7
PTPN22-211ENST00000538253 GYS1P13807 737 aa4.44□□□□□ -1.7
PTPN22-211ENST00000538253 C2CD5Q86YS7 1000 aa4.44□□□□□ -1.7
PTPN22-211ENST00000538253 ZNF34Q8IZ26 560 aa4.44□□□□□ -1.7
PTPN22-211ENST00000538253 TRMT2AQ8IZ69 625 aaKnown RBP4.44□□□□□ -1.7
PTPN22-211ENST00000538253 NECTIN2Q92692 538 aa4.44□□□□□ -1.7
PTPN22-211ENST00000538253 PLA2G12BQ9BX93 195 aa4.44□□□□□ -1.7
PTPN22-211ENST00000538253 RTL9Q8NET4 1388 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 LY75O60449 1722 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 C4BP0C0L5 1744 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 AIMP1Q12904 312 aaKnown RBP4.43□□□□□ -1.7
PTPN22-211ENST00000538253 GPR162Q16538 588 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 CCDC57Q2TAC2 916 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 CERS3Q8IU89 383 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 DZIP1LQ8IYY4 767 aaKnown RBP4.43□□□□□ -1.7
PTPN22-211ENST00000538253 GPATCH3Q96I76 525 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 ISCA1Q9BUE6 129 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 AKAP2Q9Y2D5 859 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 U3KPZ7 1027 aaPredicted RBP4.43□□□□□ -1.7
PTPN22-211ENST00000538253 PAPPAQ13219 1627 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 TM4SF1P30408 202 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 ATF7IPQ6VMQ6 1270 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 FAM43BQ6ZT52 329 aaPredicted RBP4.43□□□□□ -1.7
PTPN22-211ENST00000538253 ANKRD18AQ8IVF6 992 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 MPHOSPH8Q99549 860 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 THUMPD2Q9BTF0 503 aaKnown RBP4.43□□□□□ -1.7
PTPN22-211ENST00000538253 LRRC4BQ9NT99 713 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 LRP5O75197 1615 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 GNAI2P04899 355 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 ATP2B4P23634 1241 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 KCNJ4P48050 445 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 IFIT5Q13325 482 aaKnown RBP4.43□□□□□ -1.7
PTPN22-211ENST00000538253 NFIXQ14938 502 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 SF3B3Q15393 1217 aaKnown RBP4.43□□□□□ -1.7
PTPN22-211ENST00000538253 ZNF827Q17R98 1081 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 DPY19L2Q6NUT2 758 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 SLF2Q8IX21 1173 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 RPAP2Q8IXW5 612 aaPredicted RBP4.43□□□□□ -1.7
PTPN22-211ENST00000538253 PROM2Q8N271 834 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 MRPL50Q8N5N7 158 aaKnown RBP4.43□□□□□ -1.7
PTPN22-211ENST00000538253 JDP2Q8WYK2 163 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 MYD88Q99836 296 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 TBC1D2BQ9UPU7 963 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 MAP3K2Q9Y2U5 619 aa4.43□□□□□ -1.7
PTPN22-211ENST00000538253 LAMB4A4D0S4 1761 aa4.42□□□□□ -1.7
PTPN22-211ENST00000538253 LTBP3Q9NS15 1303 aa4.42□□□□□ -1.7
PTPN22-211ENST00000538253 GRM8O00222 908 aa4.42□□□□□ -1.7
PTPN22-211ENST00000538253 HOXA10P31260 410 aaPredicted RBP4.42□□□□□ -1.7
PTPN22-211ENST00000538253 ZBTB3Q9H5J0 574 aa4.42□□□□□ -1.7
PTPN22-211ENST00000538253 LEMD3Q9Y2U8 911 aa4.42□□□□□ -1.7
PTPN22-211ENST00000538253 SBF2Q86WG5 1849 aa4.42□□□□□ -1.7
PTPN22-211ENST00000538253 IRS4O14654 1257 aaPredicted RBP4.42□□□□□ -1.7
PTPN22-211ENST00000538253 ZBTB7AO95365 584 aa4.42□□□□□ -1.7
PTPN22-211ENST00000538253 RARSP54136 660 aaKnown RBP4.42□□□□□ -1.7
PTPN22-211ENST00000538253 NLRP10Q86W26 655 aa4.42□□□□□ -1.7
PTPN22-211ENST00000538253 ZGPATQ8N5A5 531 aaKnown RBP4.42□□□□□ -1.7
PTPN22-211ENST00000538253 C8orf58Q8NAV2 365 aa4.42□□□□□ -1.7
PTPN22-211ENST00000538253 TSR2Q969E8 191 aaKnown RBP4.42□□□□□ -1.7
PTPN22-211ENST00000538253 ATF5Q9Y2D1 282 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms