RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 KIAA0232Q92628 1395 aa8.11□□□□□ -1.11
DDB1-210ENST00000538129 WNT7AO00755 349 aa8.11□□□□□ -1.11
DDB1-210ENST00000538129 RXRBP28702 533 aa8.11□□□□□ -1.11
DDB1-210ENST00000538129 PTCRAQ6ISU1 281 aaPredicted RBP8.11□□□□□ -1.11
DDB1-210ENST00000538129 POTEAQ6S8J7 498 aa8.11□□□□□ -1.11
DDB1-210ENST00000538129 ARHGEF25Q86VW2 580 aa8.11□□□□□ -1.11
DDB1-210ENST00000538129 EHBP1Q8NDI1 1231 aa8.11□□□□□ -1.11
DDB1-210ENST00000538129 BTG4Q9NY30 223 aa8.11□□□□□ -1.11
DDB1-210ENST00000538129 KNSTRNQ9Y448 316 aa8.11□□□□□ -1.11
DDB1-210ENST00000538129 SLIT3O75094 1523 aa8.11□□□□□ -1.11
DDB1-210ENST00000538129 SLIT2O94813 1529 aa8.11□□□□□ -1.11
DDB1-210ENST00000538129 BCL9LQ86UU0 1499 aa8.11□□□□□ -1.11
DDB1-210ENST00000538129 USP54Q70EL1 1684 aa8.11□□□□□ -1.11
DDB1-210ENST00000538129 PHRF1Q9P1Y6 1649 aaKnown RBP8.11□□□□□ -1.11
DDB1-210ENST00000538129 COL14A1Q05707 1796 aaKnown RBP8.1□□□□□ -1.11
DDB1-210ENST00000538129 NWD2Q9ULI1 1742 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 GFRA3O60609 400 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 VARSP26640 1264 aaKnown RBP8.1□□□□□ -1.11
DDB1-210ENST00000538129 EVA1CP58658 441 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 RBM6P78332 1123 aaKnown RBP8.1□□□□□ -1.11
DDB1-210ENST00000538129 PRR20EP86478 221 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 PRR20CP86479 221 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 PRR20DP86480 221 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 PRR20BP86481 221 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 PRR20AP86496 221 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 FOXC1Q12948 553 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 FLIIQ13045 1269 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 CHRNA2Q15822 529 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 VPS72Q15906 364 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 CYP4X1Q8N118 509 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 ZNF511Q8NB15 262 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 LRRN4Q8WUT4 740 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 BAP1Q92560 729 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 ZNF592Q92610 1267 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 GGNBP2Q9H3C7 697 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 FKBPLQ9UIM3 349 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 OVOS2A0A0J9YW53 1432 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 OVOS2Q6IE36 1432 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 NSD3Q9BZ95 1437 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 AATKQ6ZMQ8 1374 aa8.1□□□□□ -1.11
DDB1-210ENST00000538129 PTK2Q05397 1052 aa8.09□□□□□ -1.11
DDB1-210ENST00000538129 RC3H1Q5TC82 1133 aaKnown RBP8.09□□□□□ -1.11
DDB1-210ENST00000538129 GJD4Q96KN9 370 aaPredicted RBP8.09□□□□□ -1.11
DDB1-210ENST00000538129 TTC24A2A3L6 582 aaPredicted RBP8.08□□□□□ -1.12
DDB1-210ENST00000538129 NRG2O14511 850 aaPredicted RBP8.08□□□□□ -1.12
DDB1-210ENST00000538129 NR6A1Q15406 480 aa8.08□□□□□ -1.12
DDB1-210ENST00000538129 LINC01559Q495D7 138 aa8.08□□□□□ -1.12
DDB1-210ENST00000538129 PDXDC2PQ6P474 469 aa8.08□□□□□ -1.12
DDB1-210ENST00000538129 FAM174AQ8TBP5 190 aa8.08□□□□□ -1.12
DDB1-210ENST00000538129 GPSM3Q9Y4H4 160 aa8.08□□□□□ -1.12
DDB1-210ENST00000538129 ATRNO75882 1429 aa8.08□□□□□ -1.12
DDB1-210ENST00000538129 NSD2O96028 1365 aa8.08□□□□□ -1.12
DDB1-210ENST00000538129 KIF20BQ96Q89 1820 aa8.08□□□□□ -1.12
DDB1-210ENST00000538129 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.07□□□□□ -1.12
DDB1-210ENST00000538129 ZBTB7CA1YPR0 619 aa8.07□□□□□ -1.12
DDB1-210ENST00000538129 SH3BP2P78314 561 aa8.07□□□□□ -1.12
DDB1-210ENST00000538129 WWC1Q8IX03 1113 aa8.07□□□□□ -1.12
DDB1-210ENST00000538129 IP6K1Q92551 441 aa8.07□□□□□ -1.12
DDB1-210ENST00000538129 EMID1Q96A84 441 aaPredicted RBP8.07□□□□□ -1.12
DDB1-210ENST00000538129 ZNF330Q9Y3S2 320 aaPredicted RBP8.07□□□□□ -1.12
DDB1-210ENST00000538129 PLCH1Q4KWH8 1693 aa8.07□□□□□ -1.12
DDB1-210ENST00000538129 CAMTA1Q9Y6Y1 1673 aa8.07□□□□□ -1.12
DDB1-210ENST00000538129 NFAT5O94916 1531 aa8.07□□□□□ -1.12
DDB1-210ENST00000538129 COL18A1P39060 1754 aa8.07□□□□□ -1.12
DDB1-210ENST00000538129 SPATA31A5Q5VU36 1347 aa8.06□□□□□ -1.12
DDB1-210ENST00000538129 SPATA31A7Q8IWB4 1347 aa8.06□□□□□ -1.12
DDB1-210ENST00000538129 AMPHP49418 695 aa8.06□□□□□ -1.12
DDB1-210ENST00000538129 ZBTB33Q86T24 672 aa8.06□□□□□ -1.12
DDB1-210ENST00000538129 MORC1Q86VD1 984 aa8.06□□□□□ -1.12
DDB1-210ENST00000538129 SNIP1Q8TAD8 396 aaKnown RBP8.06□□□□□ -1.12
DDB1-210ENST00000538129 STRN4Q9NRL3 753 aa8.06□□□□□ -1.12
DDB1-210ENST00000538129 PODXL2Q9NZ53 605 aa8.06□□□□□ -1.12
DDB1-210ENST00000538129 CCDC9Q9Y3X0 531 aaKnown RBP8.06□□□□□ -1.12
DDB1-210ENST00000538129 NDUFB9Q9Y6M9 179 aa8.06□□□□□ -1.12
DDB1-210ENST00000538129 KIF24Q5T7B8 1368 aa8.06□□□□□ -1.12
DDB1-210ENST00000538129 NPC1L1Q9UHC9 1359 aa8.06□□□□□ -1.12
DDB1-210ENST00000538129 MAP2P11137 1827 aaKnown RBP8.06□□□□□ -1.12
DDB1-210ENST00000538129 MAP3K19Q56UN5 1328 aa8.05□□□□□ -1.12
DDB1-210ENST00000538129 LMO7Q8WWI1 1683 aa8.05□□□□□ -1.12
DDB1-210ENST00000538129 LTN1O94822 1766 aa8.05□□□□□ -1.12
DDB1-210ENST00000538129 ABCC6O95255 1503 aa8.05□□□□□ -1.12
DDB1-210ENST00000538129 GDF9O60383 454 aa8.05□□□□□ -1.12
DDB1-210ENST00000538129 FBLN1P23142 703 aa8.05□□□□□ -1.12
DDB1-210ENST00000538129 LARP1Q6PKG0 1096 aaKnown RBP8.05□□□□□ -1.12
DDB1-210ENST00000538129 ARHGAP9Q9BRR9 750 aa8.05□□□□□ -1.12
DDB1-210ENST00000538129 CDV3Q9UKY7 258 aaKnown RBP8.05□□□□□ -1.12
DDB1-210ENST00000538129 THRAP3Q9Y2W1 955 aaKnown RBP8.05□□□□□ -1.12
DDB1-210ENST00000538129 CDK12Q9NYV4 1490 aaPredicted RBP8.05□□□□□ -1.12
DDB1-210ENST00000538129 RGPD5Q99666 1765 aa8.05□□□□□ -1.12
DDB1-210ENST00000538129 SPATA31A1Q5TZJ5 1347 aa8.04□□□□□ -1.12
DDB1-210ENST00000538129 WDR17Q8IZU2 1322 aa8.04□□□□□ -1.12
DDB1-210ENST00000538129 NRAPQ86VF7 1730 aa8.04□□□□□ -1.12
DDB1-210ENST00000538129 TNFRSF10AO00220 468 aa8.04□□□□□ -1.12
DDB1-210ENST00000538129 RAD21O60216 631 aa8.04□□□□□ -1.12
DDB1-210ENST00000538129 CSB-PGBD3P0DP91 1061 aa8.04□□□□□ -1.12
DDB1-210ENST00000538129 HOXC9P31274 260 aa8.04□□□□□ -1.12
DDB1-210ENST00000538129 RRS1Q15050 365 aaKnown RBP8.04□□□□□ -1.12
DDB1-210ENST00000538129 PKDCCQ504Y2 493 aa8.04□□□□□ -1.12
DDB1-210ENST00000538129 TOM1L2Q6ZVM7 507 aa8.04□□□□□ -1.12
DDB1-210ENST00000538129 TCP11L2Q8N4U5 519 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms