RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 BCL9O00512 1426 aa21.21■□□□□ 0.99
SNX17-210ENST00000537606 SGSM2O43147 1006 aa21.21■□□□□ 0.99
SNX17-210ENST00000537606 NEK4P51957 841 aa21.21■□□□□ 0.99
SNX17-210ENST00000537606 VSIG10Q8N0Z9 540 aa21.21■□□□□ 0.99
SNX17-210ENST00000537606 CCDC191Q8NCU4 936 aa21.21■□□□□ 0.99
SNX17-210ENST00000537606 PHLPP1O60346 1717 aa21.21■□□□□ 0.99
SNX17-210ENST00000537606 ST18O60284 1047 aa21.2■□□□□ 0.99
SNX17-210ENST00000537606 ACSBG1Q96GR2 724 aa21.2■□□□□ 0.99
SNX17-210ENST00000537606 TEX13AQ9BXU3 409 aaPredicted RBP21.2■□□□□ 0.99
SNX17-210ENST00000537606 SPATA31A1Q5TZJ5 1347 aa21.2■□□□□ 0.98
SNX17-210ENST00000537606 MCCP23508 829 aa21.2■□□□□ 0.98
SNX17-210ENST00000537606 DDB1Q16531 1140 aa21.19■□□□□ 0.98
SNX17-210ENST00000537606 GZF1Q9H116 711 aaPredicted RBP21.19■□□□□ 0.98
SNX17-210ENST00000537606 DIAPH3Q9NSV4 1193 aa21.19■□□□□ 0.98
SNX17-210ENST00000537606 TCIRG1Q13488 830 aa21.19■□□□□ 0.98
SNX17-210ENST00000537606 ZNF594Q96JF6 807 aaPredicted RBP21.19■□□□□ 0.98
SNX17-210ENST00000537606 NUP188Q5SRE5 1749 aa21.19■□□□□ 0.98
SNX17-210ENST00000537606 KIF6Q6ZMV9 814 aa21.18■□□□□ 0.98
SNX17-210ENST00000537606 HLFQ16534 295 aa21.18■□□□□ 0.98
SNX17-210ENST00000537606 TNNI3KQ59H18 835 aa21.18■□□□□ 0.98
SNX17-210ENST00000537606 EDC3Q96F86 508 aaKnown RBP21.18■□□□□ 0.98
SNX17-210ENST00000537606 CCDC85AQ96PX6 553 aaPredicted RBP21.18■□□□□ 0.98
SNX17-210ENST00000537606 ISCA1Q9BUE6 129 aa21.18■□□□□ 0.98
SNX17-210ENST00000537606 DBNLQ9UJU6 430 aaKnown RBP21.18■□□□□ 0.98
SNX17-210ENST00000537606 FPGT-TNNI3KV9GXZ4 949 aa21.18■□□□□ 0.98
SNX17-210ENST00000537606 COL15A1P39059 1388 aa21.17■□□□□ 0.98
SNX17-210ENST00000537606 TOM1O60784 492 aa21.17■□□□□ 0.98
SNX17-210ENST00000537606 CYP19A1P11511 503 aaPredicted RBP21.17■□□□□ 0.98
SNX17-210ENST00000537606 RAB3GAP1Q15042 981 aa21.17■□□□□ 0.98
SNX17-210ENST00000537606 NOL8Q76FK4 1167 aaKnown RBP21.17■□□□□ 0.98
SNX17-210ENST00000537606 EVI5LQ96CN4 794 aa21.17■□□□□ 0.98
SNX17-210ENST00000537606 FAM89AQ96GI7 184 aa21.17■□□□□ 0.98
SNX17-210ENST00000537606 UPF3BQ9BZI7 483 aaKnown RBP21.17■□□□□ 0.98
SNX17-210ENST00000537606 ZBTB1Q9Y2K1 713 aa21.17■□□□□ 0.98
SNX17-210ENST00000537606 NDUFB9Q9Y6M9 179 aa21.17■□□□□ 0.98
SNX17-210ENST00000537606 GPTP24298 496 aa21.17■□□□□ 0.98
SNX17-210ENST00000537606 CIZ1Q9ULV3 898 aaPredicted RBP21.17■□□□□ 0.98
SNX17-210ENST00000537606 LSG1Q9H089 658 aaKnown RBP21.16■□□□□ 0.98
SNX17-210ENST00000537606 SSFA2P28290 1259 aa21.16■□□□□ 0.98
SNX17-210ENST00000537606 SYNE4Q8N205 404 aa21.16■□□□□ 0.98
SNX17-210ENST00000537606 BRPF3Q9ULD4 1205 aa21.16■□□□□ 0.98
SNX17-210ENST00000537606 PLCH1Q4KWH8 1693 aa21.16■□□□□ 0.98
SNX17-210ENST00000537606 HSPA4P34932 840 aa21.15■□□□□ 0.98
SNX17-210ENST00000537606 KIAA1211Q6ZU35 1233 aa21.15■□□□□ 0.98
SNX17-210ENST00000537606 FAM227BQ96M60 508 aa21.15■□□□□ 0.98
SNX17-210ENST00000537606 DBNDD2Q9BQY9 259 aa21.15■□□□□ 0.98
SNX17-210ENST00000537606 TRAK2O60296 914 aa21.15■□□□□ 0.98
SNX17-210ENST00000537606 LRRC24Q50LG9 513 aa21.15■□□□□ 0.98
SNX17-210ENST00000537606 MARCH10Q8NA82 808 aaPredicted RBP21.15■□□□□ 0.98
SNX17-210ENST00000537606 ZGPATQ8N5A5 531 aaKnown RBP21.14■□□□□ 0.97
SNX17-210ENST00000537606 RAD50Q92878 1312 aa21.14■□□□□ 0.97
SNX17-210ENST00000537606 PTH1RQ03431 593 aa21.14■□□□□ 0.97
SNX17-210ENST00000537606 ATG9AQ7Z3C6 839 aa21.14■□□□□ 0.97
SNX17-210ENST00000537606 TBC1D2BQ9UPU7 963 aa21.14■□□□□ 0.97
SNX17-210ENST00000537606 TJP1Q07157 1748 aa21.13■□□□□ 0.97
SNX17-210ENST00000537606 MAP3K15Q6ZN16 1313 aa21.13■□□□□ 0.97
SNX17-210ENST00000537606 ANAPC15P60006 121 aa21.13■□□□□ 0.97
SNX17-210ENST00000537606 IL27Q8NEV9 243 aa21.13■□□□□ 0.97
SNX17-210ENST00000537606 FSD1Q9BTV5 496 aa21.13■□□□□ 0.97
SNX17-210ENST00000537606 UBAP1LF5GYI3 381 aa21.13■□□□□ 0.97
SNX17-210ENST00000537606 RASEFQ8IZ41 740 aa21.13■□□□□ 0.97
SNX17-210ENST00000537606 NEUROD6Q96NK8 337 aa21.13■□□□□ 0.97
SNX17-210ENST00000537606 PUS3Q9BZE2 481 aaKnown RBP21.13■□□□□ 0.97
SNX17-210ENST00000537606 SPATA31A5Q5VU36 1347 aa21.12■□□□□ 0.97
SNX17-210ENST00000537606 SPATA31A7Q8IWB4 1347 aa21.12■□□□□ 0.97
SNX17-210ENST00000537606 TIMM10P62072 90 aa21.12■□□□□ 0.97
SNX17-210ENST00000537606 NMIQ13287 307 aaPredicted RBP21.12■□□□□ 0.97
SNX17-210ENST00000537606 RUFY2Q8WXA3 655 aa21.12■□□□□ 0.97
SNX17-210ENST00000537606 THRAP3Q9Y2W1 955 aaKnown RBP21.12■□□□□ 0.97
SNX17-210ENST00000537606 GIGYF2Q6Y7W6 1299 aaKnown RBP21.12■□□□□ 0.97
SNX17-210ENST00000537606 CDCA7Q9BWT1 371 aaPredicted RBP21.12■□□□□ 0.97
SNX17-210ENST00000537606 PKP1Q13835 747 aa21.11■□□□□ 0.97
SNX17-210ENST00000537606 TMX3Q96JJ7 454 aa21.1■□□□□ 0.97
SNX17-210ENST00000537606 DNAJC2Q99543 621 aaKnown RBP21.1■□□□□ 0.97
SNX17-210ENST00000537606 SNX14Q9Y5W7 946 aa21.1■□□□□ 0.97
SNX17-210ENST00000537606 CHGBP05060 677 aa21.1■□□□□ 0.97
SNX17-210ENST00000537606 DDX11L8A8MPP1 907 aa21.09■□□□□ 0.97
SNX17-210ENST00000537606 TRIM28Q13263 835 aaKnown RBP21.09■□□□□ 0.97
SNX17-210ENST00000537606 C8orf37Q96NL8 207 aa21.09■□□□□ 0.97
SNX17-210ENST00000537606 DOT1LQ8TEK3 1739 aa21.09■□□□□ 0.97
SNX17-210ENST00000537606 A0A0D9SFI3 127 aa21.09■□□□□ 0.97
SNX17-210ENST00000537606 ATP5JP18859 108 aa21.09■□□□□ 0.97
SNX17-210ENST00000537606 NRAPQ86VF7 1730 aa21.09■□□□□ 0.97
SNX17-210ENST00000537606 EYA2O00167 538 aa21.08■□□□□ 0.97
SNX17-210ENST00000537606 PCCAP05165 728 aaPredicted RBP21.08■□□□□ 0.97
SNX17-210ENST00000537606 FAM98CQ17RN3 349 aaKnown RBP21.08■□□□□ 0.97
SNX17-210ENST00000537606 CCDC57Q2TAC2 916 aa21.08■□□□□ 0.97
SNX17-210ENST00000537606 NLRP10Q86W26 655 aa21.08■□□□□ 0.97
SNX17-210ENST00000537606 ZBTB38Q8NAP3 1195 aaPredicted RBP21.08■□□□□ 0.97
SNX17-210ENST00000537606 WNK3Q9BYP7 1800 aa21.08■□□□□ 0.97
SNX17-210ENST00000537606 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.08■□□□□ 0.96
SNX17-210ENST00000537606 KCNQ2O43526 872 aa21.08■□□□□ 0.96
SNX17-210ENST00000537606 ATP6V1AP38606 617 aa21.08■□□□□ 0.96
SNX17-210ENST00000537606 DZIP3Q86Y13 1208 aaKnown RBP21.08■□□□□ 0.96
SNX17-210ENST00000537606 GBP4Q96PP9 640 aa21.08■□□□□ 0.96
SNX17-210ENST00000537606 CPA1P15085 419 aa21.07■□□□□ 0.96
SNX17-210ENST00000537606 IL15P40933 162 aaPredicted RBP21.07■□□□□ 0.96
SNX17-210ENST00000537606 PRPF40BQ6NWY9 871 aaKnown RBP21.07■□□□□ 0.96
SNX17-210ENST00000537606 LARP6Q9BRS8 491 aaKnown RBP21.07■□□□□ 0.96
SNX17-210ENST00000537606 LRP6O75581 1613 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms