RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 ANO10Q9NW15 660 aa6.26□□□□□ -1.41
PTPRD-213ENST00000537002 RTL1A6NKG5 1358 aa6.26□□□□□ -1.41
PTPRD-213ENST00000537002 TDRD7Q8NHU6 1098 aaKnown RBP6.26□□□□□ -1.41
PTPRD-213ENST00000537002 EXOC6BQ9Y2D4 811 aa6.26□□□□□ -1.41
PTPRD-213ENST00000537002 TARBP1Q13395 1621 aaKnown RBP6.26□□□□□ -1.41
PTPRD-213ENST00000537002 CAPN2P17655 700 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 ZNF165P49910 485 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 SPATS2Q86XZ4 545 aaKnown RBP6.25□□□□□ -1.41
PTPRD-213ENST00000537002 DNAI1Q9UI46 699 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 SAMD9LQ8IVG5 1584 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 ZSCAN22P10073 491 aaPredicted RBP6.25□□□□□ -1.41
PTPRD-213ENST00000537002 KIF4BQ2VIQ3 1234 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 SWT1Q5T5J6 900 aaKnown RBP6.25□□□□□ -1.41
PTPRD-213ENST00000537002 FCHSD1Q86WN1 690 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 SLC12A5Q9H2X9 1139 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 MAGEA9P43362 315 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 ATL3Q6DD88 541 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 TMEM132EQ6IEE7 984 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 VPS18Q9P253 973 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 MADDQ8WXG6 1647 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 ATP6V1AP38606 617 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 RAD51AP2Q09MP3 1159 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 TSHZ3Q63HK5 1081 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 ZNF526Q8TF50 670 aaPredicted RBP6.25□□□□□ -1.41
PTPRD-213ENST00000537002 TFIP11Q9UBB9 837 aaKnown RBP6.25□□□□□ -1.41
PTPRD-213ENST00000537002 CFAP45Q9UL16 551 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 ZFYVE9O95405 1425 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 TDO2P48775 406 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 EIF5P55010 431 aaKnown RBP6.25□□□□□ -1.41
PTPRD-213ENST00000537002 ANKRD1Q15327 319 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 SAFBQ15424 915 aaKnown RBP eCLIP6.25□□□□□ -1.41
PTPRD-213ENST00000537002 THUMPD2Q9BTF0 503 aaKnown RBP6.25□□□□□ -1.41
PTPRD-213ENST00000537002 TRPM2O94759 1503 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 TOP1P11387 765 aaKnown RBP6.25□□□□□ -1.41
PTPRD-213ENST00000537002 ERCC3P19447 782 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 ERC1Q8IUD2 1116 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 EFCAB13Q8IY85 973 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 DNAJC25Q9H1X3 360 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 ARFGAP3Q9NP61 516 aa6.25□□□□□ -1.41
PTPRD-213ENST00000537002 ELF2Q15723 593 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 ODF2Q5BJF6 829 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 SUGP1Q8IWZ8 645 aaKnown RBP6.24□□□□□ -1.41
PTPRD-213ENST00000537002 RBM33Q96EV2 1170 aaKnown RBP6.24□□□□□ -1.41
PTPRD-213ENST00000537002 KIF5CO60282 957 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 MARCH6O60337 910 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 STX1AQ16623 288 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 ZSCAN26Q16670 478 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 BLOC1S2Q6QNY1 142 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 CLASRPQ8N2M8 674 aaKnown RBP6.24□□□□□ -1.41
PTPRD-213ENST00000537002 CCDC47Q96A33 483 aaKnown RBP6.24□□□□□ -1.41
PTPRD-213ENST00000537002 FAM53CQ9NYF3 392 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 BIN1O00499 593 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 KIF3CO14782 793 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 CCDC172P0C7W6 258 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 GNG11P61952 73 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 CCDC148Q8NFR7 591 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 SIL1Q9H173 461 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 L2HGDHQ9H9P8 463 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 JRKLQ9Y4A0 524 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 FCHSD2O94868 740 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 BRD3Q15059 726 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 WASHC4Q2M389 1173 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 SYT10Q6XYQ8 523 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 NEUROD6Q96NK8 337 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 EFCAB8A8MWE9 144 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 UBAP1LF5GYI3 381 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 MYO1CO00159 1063 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 RALYLQ86SE5 291 aaKnown RBP6.24□□□□□ -1.41
PTPRD-213ENST00000537002 CCDC12Q8WUD4 166 aaPredicted RBP6.24□□□□□ -1.41
PTPRD-213ENST00000537002 CPLX3Q8WVH0 158 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 CEP83Q9Y592 693 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 GOLGA6L7A0A1B0GV03 622 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 MCM6Q14566 821 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 CCDC158Q5M9N0 1113 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 POTEDQ86YR6 584 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 MPHOSPH8Q99549 860 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 RAI14Q9P0K7 980 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 LIMCH1Q9UPQ0 1083 aa6.24□□□□□ -1.41
PTPRD-213ENST00000537002 TMCO5BA8MYB1 307 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 DACH1Q9UI36 760 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 ABCA9Q8IUA7 1624 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 ABCC4O15439 1325 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 LUZP1Q86V48 1076 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 PLEKHM2Q8IWE5 1019 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 RNF216Q9NWF9 866 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-213ENST00000537002 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-213ENST00000537002 PHLPP2Q6ZVD8 1323 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 SPHKAPQ2M3C7 1700 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 PHACTR2O75167 634 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 ATP2C2O75185 946 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 RPS6KA5O75582 802 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 ZNF75DP51815 510 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 LRRFIP1Q32MZ4 808 aaKnown RBP6.23□□□□□ -1.41
PTPRD-213ENST00000537002 MMS22LQ6ZRQ5 1243 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 GPR161Q8N6U8 529 aaKnown RBP6.23□□□□□ -1.41
PTPRD-213ENST00000537002 FBXO18Q8NFZ0 1043 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 CCDC69A6NI79 296 aa6.23□□□□□ -1.41
PTPRD-213ENST00000537002 HMGB1P09429 215 aaKnown RBP6.23□□□□□ -1.41
PTPRD-213ENST00000537002 TMPOP42166 694 aaKnown RBP6.23□□□□□ -1.41
PTPRD-213ENST00000537002 MED4Q9NPJ6 270 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 218.2 ms