RNA–Protein interactions for RNA: ENST00000536872.5

COPS7A-205, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-205ENST00000536872 SYNE4Q8N205 404 aa24.59■■□□□ 1.53
COPS7A-205ENST00000536872 SSH1Q8WYL5 1049 aa24.58■■□□□ 1.53
COPS7A-205ENST00000536872 ADCY9O60503 1353 aa24.57■■□□□ 1.52
COPS7A-205ENST00000536872 ABCC12Q96J65 1359 aa24.57■■□□□ 1.52
COPS7A-205ENST00000536872 ZBED9Q6R2W3 1325 aa24.57■■□□□ 1.52
COPS7A-205ENST00000536872 ANKRD31Q8N7Z5 1873 aa24.56■■□□□ 1.52
COPS7A-205ENST00000536872 F6X3S4 739 aa24.56■■□□□ 1.52
COPS7A-205ENST00000536872 GRIN3BO60391 1043 aa24.56■■□□□ 1.52
COPS7A-205ENST00000536872 HCLS1P14317 486 aaPredicted RBP24.56■■□□□ 1.52
COPS7A-205ENST00000536872 NEXNQ0ZGT2 675 aa24.56■■□□□ 1.52
COPS7A-205ENST00000536872 MRPL50Q8N5N7 158 aaKnown RBP24.56■■□□□ 1.52
COPS7A-205ENST00000536872 JARID2Q92833 1246 aaPredicted RBP24.56■■□□□ 1.52
COPS7A-205ENST00000536872 PDZRN3Q9UPQ7 1066 aa24.56■■□□□ 1.52
COPS7A-205ENST00000536872 CACNA1FO60840 1977 aa24.56■■□□□ 1.52
COPS7A-205ENST00000536872 KIAA1551Q9HCM1 1747 aa24.55■■□□□ 1.52
COPS7A-205ENST00000536872 ARFGEF2Q9Y6D5 1785 aa24.55■■□□□ 1.52
COPS7A-205ENST00000536872 TRIM28Q13263 835 aaKnown RBP24.55■■□□□ 1.52
COPS7A-205ENST00000536872 TTLL6Q8N841 843 aa24.55■■□□□ 1.52
COPS7A-205ENST00000536872 DNAAF4Q8WXU2 420 aa24.55■■□□□ 1.52
COPS7A-205ENST00000536872 FAM89AQ96GI7 184 aa24.55■■□□□ 1.52
COPS7A-205ENST00000536872 ZNF219Q9P2Y4 722 aaPredicted RBP24.55■■□□□ 1.52
COPS7A-205ENST00000536872 SRGNP10124 158 aa24.54■■□□□ 1.52
COPS7A-205ENST00000536872 SMC4Q9NTJ3 1288 aa24.54■■□□□ 1.52
COPS7A-205ENST00000536872 SH3TC1Q8TE82 1336 aa24.54■■□□□ 1.52
COPS7A-205ENST00000536872 ANKRD36CQ5JPF3 1778 aa24.54■■□□□ 1.52
COPS7A-205ENST00000536872 IBTKQ9P2D0 1353 aaPredicted RBP24.54■■□□□ 1.52
COPS7A-205ENST00000536872 CWF19L2Q2TBE0 894 aaKnown RBP24.53■■□□□ 1.52
COPS7A-205ENST00000536872 MASTLQ96GX5 879 aa24.53■■□□□ 1.52
COPS7A-205ENST00000536872 CWC25Q9NXE8 425 aaPredicted RBP24.53■■□□□ 1.52
COPS7A-205ENST00000536872 IGKV5-2P06315 115 aa24.52■■□□□ 1.52
COPS7A-205ENST00000536872 CT47B1P0C2W7 299 aaPredicted RBP24.52■■□□□ 1.52
COPS7A-205ENST00000536872 NPR1P16066 1061 aa24.52■■□□□ 1.52
COPS7A-205ENST00000536872 SLC10A5Q5PT55 438 aa24.52■■□□□ 1.52
COPS7A-205ENST00000536872 STYK1Q6J9G0 422 aa24.52■■□□□ 1.52
COPS7A-205ENST00000536872 ARHGAP27Q6ZUM4 889 aa24.52■■□□□ 1.52
COPS7A-205ENST00000536872 C3orf67Q6ZVT6 689 aa24.52■■□□□ 1.52
COPS7A-205ENST00000536872 CCDC191Q8NCU4 936 aa24.52■■□□□ 1.52
COPS7A-205ENST00000536872 NLRP3Q96P20 1036 aa24.52■■□□□ 1.52
COPS7A-205ENST00000536872 KLRG2A4D1S0 409 aaPredicted RBP24.5■■□□□ 1.51
COPS7A-205ENST00000536872 ALDH1L2Q3SY69 923 aa24.5■■□□□ 1.51
COPS7A-205ENST00000536872 SLC4A10Q6U841 1118 aa24.5■■□□□ 1.51
COPS7A-205ENST00000536872 RPGRQ92834 1020 aaKnown RBP24.5■■□□□ 1.51
COPS7A-205ENST00000536872 CNKSR1Q969H4 720 aa24.5■■□□□ 1.51
COPS7A-205ENST00000536872 NEURL1BA8MQ27 555 aa24.49■■□□□ 1.51
COPS7A-205ENST00000536872 ZBTB38Q8NAP3 1195 aaPredicted RBP24.49■■□□□ 1.51
COPS7A-205ENST00000536872 YTHDC1Q96MU7 727 aaKnown RBP24.49■■□□□ 1.51
COPS7A-205ENST00000536872 RNF123Q5XPI4 1314 aa24.49■■□□□ 1.51
COPS7A-205ENST00000536872 IRS4O14654 1257 aaPredicted RBP24.48■■□□□ 1.51
COPS7A-205ENST00000536872 RARSP54136 660 aaKnown RBP24.48■■□□□ 1.51
COPS7A-205ENST00000536872 C21orf2O43822 256 aa24.47■■□□□ 1.51
COPS7A-205ENST00000536872 PCCAP05165 728 aaPredicted RBP24.47■■□□□ 1.51
COPS7A-205ENST00000536872 PRPF40BQ6NWY9 871 aaKnown RBP24.47■■□□□ 1.51
COPS7A-205ENST00000536872 RBM17Q96I25 401 aaKnown RBP24.47■■□□□ 1.51
COPS7A-205ENST00000536872 COL11A2P13942 1736 aaPredicted RBP24.47■■□□□ 1.51
COPS7A-205ENST00000536872 CRY2Q49AN0 593 aa24.46■■□□□ 1.51
COPS7A-205ENST00000536872 LINS1Q8NG48 757 aa24.46■■□□□ 1.51
COPS7A-205ENST00000536872 BRCA1P38398 1863 aaKnown RBP24.46■■□□□ 1.51
COPS7A-205ENST00000536872 TNRC6CQ9HCJ0 1690 aaKnown RBP24.46■■□□□ 1.51
COPS7A-205ENST00000536872 GOLGB1Q14789 3259 aaKnown RBP24.45■■□□□ 1.51
COPS7A-205ENST00000536872 ALDH1B1P30837 517 aa24.45■■□□□ 1.5
COPS7A-205ENST00000536872 NOB1Q9ULX3 412 aaKnown RBP24.45■■□□□ 1.5
COPS7A-205ENST00000536872 GCKRQ14397 625 aa24.44■■□□□ 1.5
COPS7A-205ENST00000536872 BEND3Q5T5X7 828 aa24.44■■□□□ 1.5
COPS7A-205ENST00000536872 PTPRCP08575 1304 aa24.43■■□□□ 1.5
COPS7A-205ENST00000536872 UBE3BQ7Z3V4 1068 aa24.43■■□□□ 1.5
COPS7A-205ENST00000536872 DLEC1Q9Y238 1755 aa24.42■■□□□ 1.5
COPS7A-205ENST00000536872 SLX4Q8IY92 1834 aa24.42■■□□□ 1.5
COPS7A-205ENST00000536872 BCAR3O75815 825 aa24.41■■□□□ 1.5
COPS7A-205ENST00000536872 HSP90B1P14625 803 aaKnown RBP24.41■■□□□ 1.5
COPS7A-205ENST00000536872 YY1P25490 414 aa24.41■■□□□ 1.5
COPS7A-205ENST00000536872 HOXA10P31260 410 aaPredicted RBP24.41■■□□□ 1.5
COPS7A-205ENST00000536872 DDX46Q7L014 1031 aaKnown RBP24.41■■□□□ 1.5
COPS7A-205ENST00000536872 CCDC85AQ96PX6 553 aaPredicted RBP24.41■■□□□ 1.5
COPS7A-205ENST00000536872 CRAMP1Q96RY5 1269 aa24.41■■□□□ 1.5
COPS7A-205ENST00000536872 SRCIN1Q9C0H9 1055 aa24.41■■□□□ 1.5
COPS7A-205ENST00000536872 RIC1Q4ADV7 1423 aa24.41■■□□□ 1.5
COPS7A-205ENST00000536872 CACNA1SQ13698 1873 aa24.41■■□□□ 1.5
COPS7A-205ENST00000536872 H7C1W4 665 aa24.4■■□□□ 1.5
COPS7A-205ENST00000536872 OLFM4Q6UX06 510 aa24.4■■□□□ 1.5
COPS7A-205ENST00000536872 FRAT1Q92837 279 aaPredicted RBP24.4■■□□□ 1.5
COPS7A-205ENST00000536872 PDE8AO60658 829 aa24.39■■□□□ 1.49
COPS7A-205ENST00000536872 ARFGEF1Q9Y6D6 1849 aa24.38■■□□□ 1.49
COPS7A-205ENST00000536872 RASSF7Q02833 373 aa24.38■■□□□ 1.49
COPS7A-205ENST00000536872 SF3B3Q15393 1217 aaKnown RBP24.38■■□□□ 1.49
COPS7A-205ENST00000536872 C9orf78Q9NZ63 289 aaPredicted RBP24.38■■□□□ 1.49
COPS7A-205ENST00000536872 UTRNP46939 3433 aa24.38■■□□□ 1.49
COPS7A-205ENST00000536872 ABCC4O15439 1325 aa24.37■■□□□ 1.49
COPS7A-205ENST00000536872 CDHR2Q9BYE9 1310 aa24.37■■□□□ 1.49
COPS7A-205ENST00000536872 ALDH1L1O75891 902 aa24.37■■□□□ 1.49
COPS7A-205ENST00000536872 CHD4Q14839 1912 aa24.36■■□□□ 1.49
COPS7A-205ENST00000536872 PPEF1O14829 653 aaPredicted RBP24.36■■□□□ 1.49
COPS7A-205ENST00000536872 BRPF1P55201 1214 aaPredicted RBP24.36■■□□□ 1.49
COPS7A-205ENST00000536872 C7orf43Q8WVR3 580 aa24.36■■□□□ 1.49
COPS7A-205ENST00000536872 API5Q9BZZ5 524 aaKnown RBP24.36■■□□□ 1.49
COPS7A-205ENST00000536872 DDX60Q8IY21 1712 aaKnown RBP24.35■■□□□ 1.49
COPS7A-205ENST00000536872 CCDC152Q4G0S7 254 aa24.35■■□□□ 1.49
COPS7A-205ENST00000536872 SLC51AQ86UW1 340 aa24.35■■□□□ 1.49
COPS7A-205ENST00000536872 SEC31BQ9NQW1 1179 aa24.35■■□□□ 1.49
COPS7A-205ENST00000536872 LAMB2P55268 1798 aa24.34■■□□□ 1.49
COPS7A-205ENST00000536872 GRM8O00222 908 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms