RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 NBPF4Q96M43 638 aa18.46■□□□□ 0.55
CHFR-213ENST00000536843 CBX8Q9HC52 389 aa18.46■□□□□ 0.55
CHFR-213ENST00000536843 CDC25BP30305 580 aa18.45■□□□□ 0.54
CHFR-213ENST00000536843 NOL10Q9BSC4 688 aaKnown RBP18.45■□□□□ 0.54
CHFR-213ENST00000536843 NUP62CLQ9H1M0 184 aa18.45■□□□□ 0.54
CHFR-213ENST00000536843 SMC3Q9UQE7 1217 aa18.45■□□□□ 0.54
CHFR-213ENST00000536843 TRIM5Q9C035 493 aa18.45■□□□□ 0.54
CHFR-213ENST00000536843 BABAM1Q9NWV8 329 aa18.45■□□□□ 0.54
CHFR-213ENST00000536843 ERBB3P21860 1342 aa18.45■□□□□ 0.54
CHFR-213ENST00000536843 RAD50Q92878 1312 aa18.45■□□□□ 0.54
CHFR-213ENST00000536843 ST7Q9NRC1 585 aa18.44■□□□□ 0.54
CHFR-213ENST00000536843 ZNF446Q9NWS9 450 aa18.44■□□□□ 0.54
CHFR-213ENST00000536843 FEZ2Q9UHY8 353 aaPredicted RBP18.44■□□□□ 0.54
CHFR-213ENST00000536843 LIMCH1Q9UPQ0 1083 aa18.44■□□□□ 0.54
CHFR-213ENST00000536843 MTMR6Q9Y217 621 aa18.44■□□□□ 0.54
CHFR-213ENST00000536843 TRIM6-TRIM34B2RNG4 842 aa18.44■□□□□ 0.54
CHFR-213ENST00000536843 BMS1Q14692 1282 aaKnown RBP18.44■□□□□ 0.54
CHFR-213ENST00000536843 ELF2Q15723 593 aa18.44■□□□□ 0.54
CHFR-213ENST00000536843 PROSER2Q86WR7 435 aaPredicted RBP18.44■□□□□ 0.54
CHFR-213ENST00000536843 TRIM34Q9BYJ4 488 aa18.44■□□□□ 0.54
CHFR-213ENST00000536843 NEMFO60524 1076 aa18.43■□□□□ 0.54
CHFR-213ENST00000536843 HNRNPH2P55795 449 aaKnown RBP18.43■□□□□ 0.54
CHFR-213ENST00000536843 TSHZ3Q63HK5 1081 aa18.43■□□□□ 0.54
CHFR-213ENST00000536843 ZNF592Q92610 1267 aa18.43■□□□□ 0.54
CHFR-213ENST00000536843 STAP2Q9UGK3 403 aa18.43■□□□□ 0.54
CHFR-213ENST00000536843 CLIP2Q9UDT6 1046 aa18.43■□□□□ 0.54
CHFR-213ENST00000536843 AK2P54819 239 aa18.42■□□□□ 0.54
CHFR-213ENST00000536843 PTPN14Q15678 1187 aa18.42■□□□□ 0.54
CHFR-213ENST00000536843 ANO6Q4KMQ2 910 aa18.42■□□□□ 0.54
CHFR-213ENST00000536843 RBM43Q6ZSC3 357 aaKnown RBP18.42■□□□□ 0.54
CHFR-213ENST00000536843 RUFY3Q7L099 469 aa18.42■□□□□ 0.54
CHFR-213ENST00000536843 RILPL2Q969X0 211 aa18.42■□□□□ 0.54
CHFR-213ENST00000536843 LGR6Q9HBX8 967 aa18.42■□□□□ 0.54
CHFR-213ENST00000536843 EXOC6BQ9Y2D4 811 aa18.42■□□□□ 0.54
CHFR-213ENST00000536843 NFAT5O94916 1531 aa18.42■□□□□ 0.54
CHFR-213ENST00000536843 ELP1O95163 1332 aa18.42■□□□□ 0.54
CHFR-213ENST00000536843 SOS1Q07889 1333 aaPredicted RBP18.42■□□□□ 0.54
CHFR-213ENST00000536843 SLU7O95391 586 aaKnown RBP18.42■□□□□ 0.54
CHFR-213ENST00000536843 GNAI3P08754 354 aa18.42■□□□□ 0.54
CHFR-213ENST00000536843 H2AFXP16104 143 aaPredicted RBP18.42■□□□□ 0.54
CHFR-213ENST00000536843 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.42■□□□□ 0.54
CHFR-213ENST00000536843 CCDC144BQ3MJ40 725 aa18.41■□□□□ 0.54
CHFR-213ENST00000536843 CCDC144CPQ8IYA2 1237 aa18.41■□□□□ 0.54
CHFR-213ENST00000536843 PNMA6EA0A0J9YXQ4 647 aa18.41■□□□□ 0.54
CHFR-213ENST00000536843 HDGFL1Q5TGJ6 251 aa18.41■□□□□ 0.54
CHFR-213ENST00000536843 LRRC8AQ8IWT6 810 aa18.41■□□□□ 0.54
CHFR-213ENST00000536843 LRRC59Q96AG4 307 aaKnown RBP18.41■□□□□ 0.54
CHFR-213ENST00000536843 LRRCC1Q9C099 1032 aa18.41■□□□□ 0.54
CHFR-213ENST00000536843 KCND1Q9NSA2 647 aa18.41■□□□□ 0.54
CHFR-213ENST00000536843 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.41■□□□□ 0.54
CHFR-213ENST00000536843 V9GYY5 206 aaPredicted RBP18.41■□□□□ 0.54
CHFR-213ENST00000536843 AOX1Q06278 1338 aa18.41■□□□□ 0.54
CHFR-213ENST00000536843 LTN1O94822 1766 aa18.4■□□□□ 0.54
CHFR-213ENST00000536843 RAD51AP2Q09MP3 1159 aa18.4■□□□□ 0.54
CHFR-213ENST00000536843 MAPK8IP2Q13387 824 aaPredicted RBP18.4■□□□□ 0.54
CHFR-213ENST00000536843 KCNH5Q8NCM2 988 aa18.4■□□□□ 0.54
CHFR-213ENST00000536843 ORAI2Q96SN7 254 aa18.4■□□□□ 0.54
CHFR-213ENST00000536843 PHAXQ9H814 394 aaKnown RBP18.4■□□□□ 0.54
CHFR-213ENST00000536843 SNX14Q9Y5W7 946 aa18.4■□□□□ 0.54
CHFR-213ENST00000536843 FAM208AQ9UK61 1670 aaKnown RBP18.4■□□□□ 0.54
CHFR-213ENST00000536843 STRCQ7RTU9 1775 aa18.4■□□□□ 0.54
CHFR-213ENST00000536843 IRX3P78415 501 aaPredicted RBP18.4■□□□□ 0.54
CHFR-213ENST00000536843 ATP8B2P98198 1209 aa18.4■□□□□ 0.54
CHFR-213ENST00000536843 IL25Q9H293 177 aa18.4■□□□□ 0.54
CHFR-213ENST00000536843 CEMIPQ8WUJ3 1361 aa18.39■□□□□ 0.54
CHFR-213ENST00000536843 USP27XA6NNY8 438 aa18.39■□□□□ 0.53
CHFR-213ENST00000536843 GJB2P29033 226 aa18.39■□□□□ 0.53
CHFR-213ENST00000536843 TNMDQ9H2S6 317 aa18.39■□□□□ 0.53
CHFR-213ENST00000536843 FHOD1Q9Y613 1164 aa18.39■□□□□ 0.53
CHFR-213ENST00000536843 LIG1P18858 919 aa18.39■□□□□ 0.53
CHFR-213ENST00000536843 EIF2S2P20042 333 aaKnown RBP18.39■□□□□ 0.53
CHFR-213ENST00000536843 TTC6Q86TZ1 520 aa18.39■□□□□ 0.53
CHFR-213ENST00000536843 LRRFIP2Q9Y608 721 aaKnown RBP18.39■□□□□ 0.53
CHFR-213ENST00000536843 KIF2AO00139 706 aaPredicted RBP18.38■□□□□ 0.53
CHFR-213ENST00000536843 CAMK4Q16566 473 aa18.38■□□□□ 0.53
CHFR-213ENST00000536843 MUM1L1Q5H9M0 696 aa18.38■□□□□ 0.53
CHFR-213ENST00000536843 SARM1Q6SZW1 724 aa18.38■□□□□ 0.53
CHFR-213ENST00000536843 UNC5CLQ8IV45 518 aa18.38■□□□□ 0.53
CHFR-213ENST00000536843 DDX19AQ9NUU7 478 aaKnown RBP18.38■□□□□ 0.53
CHFR-213ENST00000536843 KCNQ3O43525 872 aa18.38■□□□□ 0.53
CHFR-213ENST00000536843 CAVIN2O95810 425 aa18.38■□□□□ 0.53
CHFR-213ENST00000536843 EIF4A1P60842 406 aaKnown RBP18.38■□□□□ 0.53
CHFR-213ENST00000536843 USP44Q9H0E7 712 aa18.38■□□□□ 0.53
CHFR-213ENST00000536843 EFCC1Q9HA90 598 aa18.38■□□□□ 0.53
CHFR-213ENST00000536843 KRT85P78386 507 aa18.37■□□□□ 0.53
CHFR-213ENST00000536843 MRFAP1L1Q96HT8 127 aa18.37■□□□□ 0.53
CHFR-213ENST00000536843 C19orf44Q9H6X5 657 aa18.37■□□□□ 0.53
CHFR-213ENST00000536843 GCP02774 474 aa18.36■□□□□ 0.53
CHFR-213ENST00000536843 ZNF165P49910 485 aa18.36■□□□□ 0.53
CHFR-213ENST00000536843 ZNF530Q6P9A1 599 aaPredicted RBP18.36■□□□□ 0.53
CHFR-213ENST00000536843 CKAP2LQ8IYA6 745 aa18.36■□□□□ 0.53
CHFR-213ENST00000536843 CLSTN2Q9H4D0 955 aa18.36■□□□□ 0.53
CHFR-213ENST00000536843 L2HGDHQ9H9P8 463 aa18.36■□□□□ 0.53
CHFR-213ENST00000536843 STRCP1A6NGW2 1772 aa18.36■□□□□ 0.53
CHFR-213ENST00000536843 DACT1Q9NYF0 836 aa18.35■□□□□ 0.53
CHFR-213ENST00000536843 LARGE1O95461 756 aa18.35■□□□□ 0.53
CHFR-213ENST00000536843 SKILP12757 684 aa18.35■□□□□ 0.53
CHFR-213ENST00000536843 LMOD2Q6P5Q4 547 aa18.35■□□□□ 0.53
CHFR-213ENST00000536843 MPRIPQ6WCQ1 1025 aa18.35■□□□□ 0.53
CHFR-213ENST00000536843 CCAR2Q8N163 923 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms