RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 HSP90AB3PQ58FF7 597 aa23.13■■□□□ 1.29
TNFRSF1A-209ENST00000536717 PPP1R42Q7Z4L9 355 aa23.13■■□□□ 1.29
TNFRSF1A-209ENST00000536717 TSR2Q969E8 191 aaKnown RBP23.13■■□□□ 1.29
TNFRSF1A-209ENST00000536717 C7orf43Q8WVR3 580 aa23.13■■□□□ 1.29
TNFRSF1A-209ENST00000536717 HYPKQ9NX55 129 aa23.13■■□□□ 1.29
TNFRSF1A-209ENST00000536717 FAM9BQ8IZU0 186 aa23.12■■□□□ 1.29
TNFRSF1A-209ENST00000536717 TSPYL6Q8N831 410 aa23.12■■□□□ 1.29
TNFRSF1A-209ENST00000536717 PLBD2Q8NHP8 589 aa23.12■■□□□ 1.29
TNFRSF1A-209ENST00000536717 KIF3CO14782 793 aa23.11■■□□□ 1.29
TNFRSF1A-209ENST00000536717 ANKRD13DQ6ZTN6 518 aa23.11■■□□□ 1.29
TNFRSF1A-209ENST00000536717 NLRP10Q86W26 655 aa23.11■■□□□ 1.29
TNFRSF1A-209ENST00000536717 UTP14AQ9BVJ6 771 aaKnown RBP23.11■■□□□ 1.29
TNFRSF1A-209ENST00000536717 IL16Q14005 1332 aa23.1■■□□□ 1.29
TNFRSF1A-209ENST00000536717 LTBP3Q9NS15 1303 aa23.1■■□□□ 1.29
TNFRSF1A-209ENST00000536717 CACNA1FO60840 1977 aa23.1■■□□□ 1.29
TNFRSF1A-209ENST00000536717 ALDH1B1P30837 517 aa23.09■■□□□ 1.29
TNFRSF1A-209ENST00000536717 SOGA3Q5TF21 947 aa23.09■■□□□ 1.29
TNFRSF1A-209ENST00000536717 C3orf67Q6ZVT6 689 aa23.09■■□□□ 1.29
TNFRSF1A-209ENST00000536717 SALL2Q9Y467 1007 aaPredicted RBP23.09■■□□□ 1.29
TNFRSF1A-209ENST00000536717 ZC3H4Q9UPT8 1303 aaKnown RBP23.09■■□□□ 1.29
TNFRSF1A-209ENST00000536717 DDX60Q8IY21 1712 aaKnown RBP23.09■■□□□ 1.29
TNFRSF1A-209ENST00000536717 SLC10A5Q5PT55 438 aa23.08■■□□□ 1.29
TNFRSF1A-209ENST00000536717 TAOK3Q9H2K8 898 aa23.08■■□□□ 1.29
TNFRSF1A-209ENST00000536717 PHAXQ9H814 394 aaKnown RBP23.08■■□□□ 1.29
TNFRSF1A-209ENST00000536717 RNF123Q5XPI4 1314 aa23.08■■□□□ 1.29
TNFRSF1A-209ENST00000536717 TAF1P21675 1872 aa23.08■■□□□ 1.28
TNFRSF1A-209ENST00000536717 OLFM4Q6UX06 510 aa23.08■■□□□ 1.28
TNFRSF1A-209ENST00000536717 NMRK2Q9NPI5 230 aa23.08■■□□□ 1.28
TNFRSF1A-209ENST00000536717 HOXA10P31260 410 aaPredicted RBP23.07■■□□□ 1.28
TNFRSF1A-209ENST00000536717 CCDC93Q567U6 631 aa23.07■■□□□ 1.28
TNFRSF1A-209ENST00000536717 SYNE4Q8N205 404 aa23.07■■□□□ 1.28
TNFRSF1A-209ENST00000536717 ISCA1Q9BUE6 129 aa23.07■■□□□ 1.28
TNFRSF1A-209ENST00000536717 RPGRQ92834 1020 aaKnown RBP23.06■■□□□ 1.28
TNFRSF1A-209ENST00000536717 SNED1Q8TER0 1413 aa23.06■■□□□ 1.28
TNFRSF1A-209ENST00000536717 CCDC30Q5VVM6 783 aa23.05■■□□□ 1.28
TNFRSF1A-209ENST00000536717 WDR63Q8IWG1 891 aa23.05■■□□□ 1.28
TNFRSF1A-209ENST00000536717 ZNF428Q96B54 188 aa23.05■■□□□ 1.28
TNFRSF1A-209ENST00000536717 NLRP3Q96P20 1036 aa23.05■■□□□ 1.28
TNFRSF1A-209ENST00000536717 TRMT112Q9UI30 125 aaKnown RBP23.05■■□□□ 1.28
TNFRSF1A-209ENST00000536717 ATP5J2-PTCD1G3V325 749 aa23.03■■□□□ 1.28
TNFRSF1A-209ENST00000536717 TWISTNBQ3B726 338 aaPredicted RBP23.03■■□□□ 1.28
TNFRSF1A-209ENST00000536717 CRAMP1Q96RY5 1269 aa23.03■■□□□ 1.28
TNFRSF1A-209ENST00000536717 KDM2BQ8NHM5 1336 aa23.03■■□□□ 1.28
TNFRSF1A-209ENST00000536717 SH3TC1Q8TE82 1336 aa23.03■■□□□ 1.28
TNFRSF1A-209ENST00000536717 FANCIQ9NVI1 1328 aa23.03■■□□□ 1.28
TNFRSF1A-209ENST00000536717 HCLS1P14317 486 aaPredicted RBP23.03■■□□□ 1.28
TNFRSF1A-209ENST00000536717 CHMP4AQ9BY43 222 aa23.03■■□□□ 1.28
TNFRSF1A-209ENST00000536717 GLTPD2A6NH11 291 aa23.02■■□□□ 1.28
TNFRSF1A-209ENST00000536717 GOLGA2Q08379 1002 aa23.02■■□□□ 1.28
TNFRSF1A-209ENST00000536717 RIC3Q7Z5B4 369 aa23.02■■□□□ 1.28
TNFRSF1A-209ENST00000536717 RBM17Q96I25 401 aaKnown RBP23.02■■□□□ 1.28
TNFRSF1A-209ENST00000536717 FKBP4Q02790 459 aaKnown RBP eCLIP23.01■■□□□ 1.27
TNFRSF1A-209ENST00000536717 TRIM28Q13263 835 aaKnown RBP23.01■■□□□ 1.27
TNFRSF1A-209ENST00000536717 RTKN2Q8IZC4 609 aa23.01■■□□□ 1.27
TNFRSF1A-209ENST00000536717 SPINK5Q9NQ38 1064 aaPredicted RBP23.01■■□□□ 1.27
TNFRSF1A-209ENST00000536717 CEP350Q5VT06 3117 aa23■■□□□ 1.27
TNFRSF1A-209ENST00000536717 SLC51AQ86UW1 340 aa23■■□□□ 1.27
TNFRSF1A-209ENST00000536717 WDR90Q96KV7 1748 aa22.99■■□□□ 1.27
TNFRSF1A-209ENST00000536717 TCERG1O14776 1098 aaKnown RBP22.99■■□□□ 1.27
TNFRSF1A-209ENST00000536717 RRAGCQ9HB90 399 aa22.99■■□□□ 1.27
TNFRSF1A-209ENST00000536717 ABCC4O15439 1325 aa22.99■■□□□ 1.27
TNFRSF1A-209ENST00000536717 FAM89AQ96GI7 184 aa22.98■■□□□ 1.27
TNFRSF1A-209ENST00000536717 PPEF1O14829 653 aaPredicted RBP22.98■■□□□ 1.27
TNFRSF1A-209ENST00000536717 TOMM70O94826 608 aa22.98■■□□□ 1.27
TNFRSF1A-209ENST00000536717 CC2D2BQ6DHV5 1058 aa22.98■■□□□ 1.27
TNFRSF1A-209ENST00000536717 MYD88Q99836 296 aa22.98■■□□□ 1.27
TNFRSF1A-209ENST00000536717 STK31Q9BXU1 1019 aa22.98■■□□□ 1.27
TNFRSF1A-209ENST00000536717 ZNF277Q9NRM2 450 aaPredicted RBP22.98■■□□□ 1.27
TNFRSF1A-209ENST00000536717 DDX58O95786 925 aaKnown RBP22.96■■□□□ 1.27
TNFRSF1A-209ENST00000536717 EXOSC9Q06265 439 aaKnown RBP22.96■■□□□ 1.27
TNFRSF1A-209ENST00000536717 PSMD1Q99460 953 aa22.96■■□□□ 1.27
TNFRSF1A-209ENST00000536717 METTL22Q9BUU2 404 aaPredicted RBP22.96■■□□□ 1.27
TNFRSF1A-209ENST00000536717 VAMP4O75379 141 aa22.95■■□□□ 1.26
TNFRSF1A-209ENST00000536717 RTL5Q5HYW3 569 aaPredicted RBP22.95■■□□□ 1.26
TNFRSF1A-209ENST00000536717 G2E3Q7L622 706 aa22.95■■□□□ 1.26
TNFRSF1A-209ENST00000536717 MAP3K2Q9Y2U5 619 aa22.95■■□□□ 1.26
TNFRSF1A-209ENST00000536717 ZNF521Q96K83 1311 aa22.94■■□□□ 1.26
TNFRSF1A-209ENST00000536717 MYH3P11055 1940 aa22.94■■□□□ 1.26
TNFRSF1A-209ENST00000536717 SLC4A2P04920 1241 aa22.94■■□□□ 1.26
TNFRSF1A-209ENST00000536717 DPY19L2Q6NUT2 758 aa22.94■■□□□ 1.26
TNFRSF1A-209ENST00000536717 COL4A1P02462 1669 aa22.94■■□□□ 1.26
TNFRSF1A-209ENST00000536717 PI4KAP2A4QPH2 592 aa22.93■■□□□ 1.26
TNFRSF1A-209ENST00000536717 POTECB2RU33 542 aa22.93■■□□□ 1.26
TNFRSF1A-209ENST00000536717 IARSP41252 1262 aaKnown RBP22.93■■□□□ 1.26
TNFRSF1A-209ENST00000536717 KSR2Q6VAB6 950 aa22.93■■□□□ 1.26
TNFRSF1A-209ENST00000536717 PI4KAP1Q8N8J0 262 aa22.93■■□□□ 1.26
TNFRSF1A-209ENST00000536717 CCDC191Q8NCU4 936 aa22.93■■□□□ 1.26
TNFRSF1A-209ENST00000536717 ATP6V0A2Q9Y487 856 aa22.93■■□□□ 1.26
TNFRSF1A-209ENST00000536717 LRRC37AA6NMS7 1700 aa22.93■■□□□ 1.26
TNFRSF1A-209ENST00000536717 COL4A5P29400 1685 aa22.93■■□□□ 1.26
TNFRSF1A-209ENST00000536717 IRS4O14654 1257 aaPredicted RBP22.92■■□□□ 1.26
TNFRSF1A-209ENST00000536717 SF3B3Q15393 1217 aaKnown RBP22.92■■□□□ 1.26
TNFRSF1A-209ENST00000536717 DDX46Q7L014 1031 aaKnown RBP22.92■■□□□ 1.26
TNFRSF1A-209ENST00000536717 ZBTB38Q8NAP3 1195 aaPredicted RBP22.92■■□□□ 1.26
TNFRSF1A-209ENST00000536717 GRIPAP1Q4V328 841 aa22.92■■□□□ 1.26
TNFRSF1A-209ENST00000536717 RBM46Q8TBY0 533 aaKnown RBP22.92■■□□□ 1.26
TNFRSF1A-209ENST00000536717 SCN4AP35499 1836 aa22.91■■□□□ 1.26
TNFRSF1A-209ENST00000536717 BBOX1O75936 387 aa22.91■■□□□ 1.26
TNFRSF1A-209ENST00000536717 DDNO94850 711 aaPredicted RBP22.91■■□□□ 1.26
TNFRSF1A-209ENST00000536717 VEGFAP15692 232 aaPredicted RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms