RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 OXCT2Q9BYC2 517 aaPredicted RBP10.22□□□□□ -0.77
CLIP1-207ENST00000536634 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.22□□□□□ -0.772e-9■■■■■ 74.8
CLIP1-207ENST00000536634 SEPT3Q9UH03 358 aa10.22□□□□□ -0.77
CLIP1-207ENST00000536634 PTCD1O75127 700 aaKnown RBP10.21□□□□□ -0.77
CLIP1-207ENST00000536634 SSFA2P28290 1259 aa10.21□□□□□ -0.77
CLIP1-207ENST00000536634 PHLDB3Q6NSJ2 640 aa10.21□□□□□ -0.77
CLIP1-207ENST00000536634 C16orf46Q6P387 395 aa10.21□□□□□ -0.77
CLIP1-207ENST00000536634 TNFRSF10BO14763 440 aa10.2□□□□□ -0.78
CLIP1-207ENST00000536634 ARHGEF15O94989 841 aa10.2□□□□□ -0.78
CLIP1-207ENST00000536634 FAM26DQ5JW98 314 aa10.2□□□□□ -0.78
CLIP1-207ENST00000536634 C1orf229Q6ZS94 237 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-207ENST00000536634 SLC30A3Q99726 388 aa10.2□□□□□ -0.78
CLIP1-207ENST00000536634 KLF15Q9UIH9 416 aa10.2□□□□□ -0.78
CLIP1-207ENST00000536634 USTQ9Y2C2 406 aa10.2□□□□□ -0.78
CLIP1-207ENST00000536634 GRNP28799 593 aaKnown RBP10.19□□□□□ -0.78
CLIP1-207ENST00000536634 KCNQ4P56696 695 aa10.19□□□□□ -0.78
CLIP1-207ENST00000536634 IFT43Q96FT9 208 aa10.19□□□□□ -0.78
CLIP1-207ENST00000536634 THOC2Q8NI27 1593 aaKnown RBP10.18□□□□□ -0.78
CLIP1-207ENST00000536634 MICAL2O94851 1124 aa10.18□□□□□ -0.78
CLIP1-207ENST00000536634 ARAFP10398 606 aa10.18□□□□□ -0.78
CLIP1-207ENST00000536634 BCRP11274 1271 aa10.18□□□□□ -0.78
CLIP1-207ENST00000536634 IDH3AP50213 366 aa10.18□□□□□ -0.78
CLIP1-207ENST00000536634 ETFBKMTQ8IXQ9 262 aa10.18□□□□□ -0.78
CLIP1-207ENST00000536634 GGA1Q9UJY5 639 aa10.18□□□□□ -0.78
CLIP1-207ENST00000536634 KCNH4Q9UQ05 1017 aa10.18□□□□□ -0.78
CLIP1-207ENST00000536634 ATAD2BQ9ULI0 1458 aa10.17□□□□□ -0.78
CLIP1-207ENST00000536634 INPP5BP32019 993 aa10.17□□□□□ -0.78
CLIP1-207ENST00000536634 RAB44Q7Z6P3 723 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-207ENST00000536634 NEURL1BA8MQ27 555 aa10.16□□□□□ -0.78
CLIP1-207ENST00000536634 PCBP4P57723 403 aaKnown RBP10.16□□□□□ -0.78
CLIP1-207ENST00000536634 MAP3K10Q02779 954 aa10.16□□□□□ -0.78
CLIP1-207ENST00000536634 SPEM2Q0P670 501 aa10.16□□□□□ -0.78
CLIP1-207ENST00000536634 ZNF468Q5VIY5 522 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-207ENST00000536634 TREML1Q86YW5 311 aa10.16□□□□□ -0.78
CLIP1-207ENST00000536634 PRR12Q9ULL5 1215 aa10.16□□□□□ -0.78
CLIP1-207ENST00000536634 OPLAHO14841 1288 aa10.15□□□□□ -0.78
CLIP1-207ENST00000536634 OIP5O43482 229 aa10.15□□□□□ -0.78
CLIP1-207ENST00000536634 SLCO4C1Q6ZQN7 724 aa10.15□□□□□ -0.78
CLIP1-207ENST00000536634 GOLGA6L1Q8N7Z2 621 aa10.15□□□□□ -0.78
CLIP1-207ENST00000536634 GDF2Q9UK05 429 aaPredicted RBP10.15□□□□□ -0.78
CLIP1-207ENST00000536634 USP20Q9Y2K6 914 aa10.15□□□□□ -0.78
CLIP1-207ENST00000536634 DNMT3AQ9Y6K1 912 aaPredicted RBP10.15□□□□□ -0.78
CLIP1-207ENST00000536634 SHISA8B8ZZ34 492 aa10.14□□□□□ -0.79
CLIP1-207ENST00000536634 ARSDP51689 593 aa10.14□□□□□ -0.79
CLIP1-207ENST00000536634 SYT9Q86SS6 491 aa10.14□□□□□ -0.79
CLIP1-207ENST00000536634 FCHSD1Q86WN1 690 aa10.14□□□□□ -0.79
CLIP1-207ENST00000536634 ADAMTS8Q9UP79 889 aa10.14□□□□□ -0.79
CLIP1-207ENST00000536634 HMGXB3Q12766 1538 aa10.13□□□□□ -0.79
CLIP1-207ENST00000536634 ADH6P28332 368 aa10.13□□□□□ -0.79
CLIP1-207ENST00000536634 GALNT6Q8NCL4 622 aa10.13□□□□□ -0.79
CLIP1-207ENST00000536634 AVENQ9NQS1 362 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-207ENST00000536634 BRD2P25440 801 aaKnown RBP10.12□□□□□ -0.79
CLIP1-207ENST00000536634 GTF3C2Q8WUA4 911 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-207ENST00000536634 EDARADDQ8WWZ3 215 aa10.12□□□□□ -0.79
CLIP1-207ENST00000536634 LRRC4BQ9NT99 713 aa10.12□□□□□ -0.79
CLIP1-207ENST00000536634 ZBTB39O15060 712 aa10.11□□□□□ -0.79
CLIP1-207ENST00000536634 EPXP11678 715 aa10.11□□□□□ -0.79
CLIP1-207ENST00000536634 BHMTQ93088 406 aa10.11□□□□□ -0.79
CLIP1-207ENST00000536634 GSX2Q9BZM3 304 aa10.11□□□□□ -0.79
CLIP1-207ENST00000536634 STIM2Q9P246 746 aa10.11□□□□□ -0.79
CLIP1-207ENST00000536634 EPB42P16452 691 aa10.1□□□□□ -0.79
CLIP1-207ENST00000536634 MTMR3Q13615 1198 aa10.1□□□□□ -0.79
CLIP1-207ENST00000536634 RGL4Q8IZJ4 473 aa10.1□□□□□ -0.79
CLIP1-207ENST00000536634 HELQQ8TDG4 1101 aa10.1□□□□□ -0.79
CLIP1-207ENST00000536634 RTCBQ9Y3I0 505 aaKnown RBP10.1□□□□□ -0.79
CLIP1-207ENST00000536634 SMARCA2P51531 1590 aa10.09□□□□□ -0.79
CLIP1-207ENST00000536634 SMARCA4P51532 1647 aa10.09□□□□□ -0.79
CLIP1-207ENST00000536634 KCNMA1Q12791 1236 aa10.09□□□□□ -0.79
CLIP1-207ENST00000536634 NEDD1Q8NHV4 660 aa10.09□□□□□ -0.79
CLIP1-207ENST00000536634 MDFIQ99750 246 aa10.09□□□□□ -0.79
CLIP1-207ENST00000536634 ENAMQ9NRM1 1142 aa10.09□□□□□ -0.79
CLIP1-207ENST00000536634 SIN3BO75182 1162 aa10.08□□□□□ -0.8
CLIP1-207ENST00000536634 CCINQ13939 588 aa10.08□□□□□ -0.8
CLIP1-207ENST00000536634 KCTD17Q8N5Z5 321 aa10.08□□□□□ -0.8
CLIP1-207ENST00000536634 KIF21AQ7Z4S6 1674 aa10.08□□□□□ -0.8
CLIP1-207ENST00000536634 NFKB1P19838 968 aa10.07□□□□□ -0.8
CLIP1-207ENST00000536634 ZAP70P43403 619 aa10.07□□□□□ -0.8
CLIP1-207ENST00000536634 KRT25Q7Z3Z0 450 aa10.07□□□□□ -0.8
CLIP1-207ENST00000536634 CMTR1Q8N1G2 835 aaKnown RBP10.07□□□□□ -0.8
CLIP1-207ENST00000536634 KCNMB2Q9Y691 235 aa10.07□□□□□ -0.8
CLIP1-207ENST00000536634 ATCAYQ86WG3 371 aa10.06□□□□□ -0.8
CLIP1-207ENST00000536634 BTBD6Q96KE9 485 aa10.06□□□□□ -0.8
CLIP1-207ENST00000536634 ZFATQ9P243 1243 aa10.06□□□□□ -0.8
CLIP1-207ENST00000536634 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.06□□□□□ -0.8
CLIP1-207ENST00000536634 ELOA3CA0A087WX78 387 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-207ENST00000536634 ELOA3DA6NLF2 546 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-207ENST00000536634 HOXB4P17483 251 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-207ENST00000536634 MPSTP25325 297 aa10.05□□□□□ -0.8
CLIP1-207ENST00000536634 SNRPNP63162 240 aaKnown RBP10.05□□□□□ -0.8
CLIP1-207ENST00000536634 ZNF211Q13398 564 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-207ENST00000536634 NEUROD1Q13562 356 aa10.05□□□□□ -0.8
CLIP1-207ENST00000536634 TRIP4Q15650 581 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-207ENST00000536634 ELOA3BQ3SY89 546 aa10.05□□□□□ -0.8
CLIP1-207ENST00000536634 B4GALNT3Q6L9W6 998 aa10.05□□□□□ -0.8
CLIP1-207ENST00000536634 ABTB2Q8N961 1025 aa10.05□□□□□ -0.8
CLIP1-207ENST00000536634 ELOA3Q8NG57 546 aa10.05□□□□□ -0.8
CLIP1-207ENST00000536634 TNFRSF25Q93038 417 aa10.05□□□□□ -0.8
CLIP1-207ENST00000536634 PNMA5Q96PV4 448 aa10.05□□□□□ -0.8
CLIP1-207ENST00000536634 ANO2Q9NQ90 1003 aa10.05□□□□□ -0.8
CLIP1-207ENST00000536634 ADARB2-AS1A8MUL3 147 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms