RNA–Protein interactions for RNA: ENST00000536610.5

CD4-207, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 608 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-207ENST00000536610 MASTLQ96GX5 879 aa12.58□□□□□ -0.4
CD4-207ENST00000536610 MYD88Q99836 296 aa12.58□□□□□ -0.4
CD4-207ENST00000536610 TRMT112Q9UI30 125 aaKnown RBP12.58□□□□□ -0.4
CD4-207ENST00000536610 CACNA1SQ13698 1873 aa12.57□□□□□ -0.4
CD4-207ENST00000536610 NPR1P16066 1061 aa12.57□□□□□ -0.4
CD4-207ENST00000536610 RASSF7Q02833 373 aa12.57□□□□□ -0.4
CD4-207ENST00000536610 STYK1Q6J9G0 422 aa12.57□□□□□ -0.4
CD4-207ENST00000536610 C3orf67Q6ZVT6 689 aa12.57□□□□□ -0.4
CD4-207ENST00000536610 ZNF784Q8NCA9 323 aaPredicted RBP12.57□□□□□ -0.4
CD4-207ENST00000536610 CNKSR1Q969H4 720 aa12.57□□□□□ -0.4
CD4-207ENST00000536610 CHMP4AQ9BY43 222 aa12.57□□□□□ -0.4
CD4-207ENST00000536610 PDZRN3Q9UPQ7 1066 aa12.57□□□□□ -0.4
CD4-207ENST00000536610 SLX4Q8IY92 1834 aa12.56□□□□□ -0.4
CD4-207ENST00000536610 PI4KAP2A4QPH2 592 aa12.56□□□□□ -0.4
CD4-207ENST00000536610 PRPF40BQ6NWY9 871 aaKnown RBP12.56□□□□□ -0.4
CD4-207ENST00000536610 PI4KAP1Q8N8J0 262 aa12.56□□□□□ -0.4
CD4-207ENST00000536610 FAM89AQ96GI7 184 aa12.56□□□□□ -0.4
CD4-207ENST00000536610 ISCA1Q9BUE6 129 aa12.56□□□□□ -0.4
CD4-207ENST00000536610 MAP3K2Q9Y2U5 619 aa12.56□□□□□ -0.4
CD4-207ENST00000536610 COL11A2P13942 1736 aaPredicted RBP12.56□□□□□ -0.4
CD4-207ENST00000536610 ZNF521Q96K83 1311 aa12.56□□□□□ -0.4
CD4-207ENST00000536610 ARFGEF1Q9Y6D6 1849 aa12.55□□□□□ -0.4
CD4-207ENST00000536610 DDX58O95786 925 aaKnown RBP12.55□□□□□ -0.4
CD4-207ENST00000536610 C9orf131Q5VYM1 1079 aa12.55□□□□□ -0.4
CD4-207ENST00000536610 OLFM4Q6UX06 510 aa12.55□□□□□ -0.4
CD4-207ENST00000536610 RPGRQ92834 1020 aaKnown RBP12.55□□□□□ -0.4
CD4-207ENST00000536610 NLRP3Q96P20 1036 aa12.55□□□□□ -0.4
CD4-207ENST00000536610 KLRG2A4D1S0 409 aaPredicted RBP12.54□□□□□ -0.4
CD4-207ENST00000536610 SLFN5Q08AF3 891 aa12.54□□□□□ -0.4
CD4-207ENST00000536610 KSR2Q6VAB6 950 aa12.54□□□□□ -0.4
CD4-207ENST00000536610 RNF181Q9P0P0 153 aa12.54□□□□□ -0.4
CD4-207ENST00000536610 SH3TC1Q8TE82 1336 aa12.54□□□□□ -0.4
CD4-207ENST00000536610 DLEC1Q9Y238 1755 aa12.53□□□□□ -0.4
CD4-207ENST00000536610 CCDC88AQ3V6T2 1871 aa12.53□□□□□ -0.4
CD4-207ENST00000536610 E9PSI1 815 aa12.53□□□□□ -0.4
CD4-207ENST00000536610 FLIIQ13045 1269 aa12.53□□□□□ -0.4
CD4-207ENST00000536610 FKBP5Q13451 457 aaPredicted RBP12.53□□□□□ -0.4
CD4-207ENST00000536610 SLC10A5Q5PT55 438 aa12.53□□□□□ -0.4
CD4-207ENST00000536610 SLC51AQ86UW1 340 aa12.53□□□□□ -0.4
CD4-207ENST00000536610 RBM17Q96I25 401 aaKnown RBP12.53□□□□□ -0.4
CD4-207ENST00000536610 METTL22Q9BUU2 404 aaPredicted RBP12.53□□□□□ -0.4
CD4-207ENST00000536610 TNRC6CQ9HCJ0 1690 aaKnown RBP12.53□□□□□ -0.4
CD4-207ENST00000536610 ANKRD36CQ5JPF3 1778 aa12.53□□□□□ -0.4
CD4-207ENST00000536610 ARFGEF2Q9Y6D5 1785 aa12.52□□□□□ -0.41
CD4-207ENST00000536610 NFKBIEO00221 500 aa12.52□□□□□ -0.41
CD4-207ENST00000536610 ALDH1B1P30837 517 aa12.52□□□□□ -0.41
CD4-207ENST00000536610 PRELPP51888 382 aa12.52□□□□□ -0.41
CD4-207ENST00000536610 SBF1O95248 1867 aa12.51□□□□□ -0.41
CD4-207ENST00000536610 F6X3S4 739 aa12.51□□□□□ -0.41
CD4-207ENST00000536610 IRS4O14654 1257 aaPredicted RBP12.51□□□□□ -0.41
CD4-207ENST00000536610 HNRNPUQ00839 825 aaKnown RBP eCLIP12.51□□□□□ -0.41
CD4-207ENST00000536610 TRIM28Q13263 835 aaKnown RBP12.51□□□□□ -0.41
CD4-207ENST00000536610 CWF19L2Q2TBE0 894 aaKnown RBP12.51□□□□□ -0.41
CD4-207ENST00000536610 CRY2Q49AN0 593 aa12.51□□□□□ -0.41
CD4-207ENST00000536610 CCDC85AQ96PX6 553 aaPredicted RBP12.51□□□□□ -0.41
CD4-207ENST00000536610 CWC25Q9NXE8 425 aaPredicted RBP12.51□□□□□ -0.41
CD4-207ENST00000536610 ADCY9O60503 1353 aa12.51□□□□□ -0.41
CD4-207ENST00000536610 IBTKQ9P2D0 1353 aaPredicted RBP12.51□□□□□ -0.41
CD4-207ENST00000536610 TAF1P21675 1872 aa12.51□□□□□ -0.41
CD4-207ENST00000536610 CACNA1FO60840 1977 aa12.5□□□□□ -0.41
CD4-207ENST00000536610 IGKV5-2P06315 115 aa12.5□□□□□ -0.41
CD4-207ENST00000536610 NEXNQ0ZGT2 675 aa12.5□□□□□ -0.41
CD4-207ENST00000536610 CCDC191Q8NCU4 936 aa12.5□□□□□ -0.41
CD4-207ENST00000536610 C7orf43Q8WVR3 580 aa12.5□□□□□ -0.41
CD4-207ENST00000536610 BCL2L13Q9BXK5 485 aa12.5□□□□□ -0.41
CD4-207ENST00000536610 LMNB1P20700 586 aa12.49□□□□□ -0.41
CD4-207ENST00000536610 HOXA10P31260 410 aaPredicted RBP12.49□□□□□ -0.41
CD4-207ENST00000536610 CCDC93Q567U6 631 aa12.49□□□□□ -0.41
CD4-207ENST00000536610 DDX46Q7L014 1031 aaKnown RBP12.49□□□□□ -0.41
CD4-207ENST00000536610 ZBTB38Q8NAP3 1195 aaPredicted RBP12.49□□□□□ -0.41
CD4-207ENST00000536610 DNAAF4Q8WXU2 420 aa12.49□□□□□ -0.41
CD4-207ENST00000536610 CRAMP1Q96RY5 1269 aa12.49□□□□□ -0.41
CD4-207ENST00000536610 TAOK3Q9H2K8 898 aa12.49□□□□□ -0.41
CD4-207ENST00000536610 GPBP1L1Q9HC44 474 aaPredicted RBP12.49□□□□□ -0.41
CD4-207ENST00000536610 ABCC4O15439 1325 aa12.48□□□□□ -0.41
CD4-207ENST00000536610 RNF123Q5XPI4 1314 aa12.48□□□□□ -0.41
CD4-207ENST00000536610 NEURL1BA8MQ27 555 aa12.48□□□□□ -0.41
CD4-207ENST00000536610 PPEF1O14829 653 aaPredicted RBP12.48□□□□□ -0.41
CD4-207ENST00000536610 SOGA3Q5TF21 947 aa12.48□□□□□ -0.41
CD4-207ENST00000536610 SLC4A10Q6U841 1118 aa12.48□□□□□ -0.41
CD4-207ENST00000536610 ZNF277Q9NRM2 450 aaPredicted RBP12.48□□□□□ -0.41
CD4-207ENST00000536610 PCCAP05165 728 aaPredicted RBP12.47□□□□□ -0.41
CD4-207ENST00000536610 MRPL50Q8N5N7 158 aaKnown RBP12.47□□□□□ -0.41
CD4-207ENST00000536610 SSH1Q8WYL5 1049 aa12.47□□□□□ -0.41
CD4-207ENST00000536610 LAMB2P55268 1798 aa12.47□□□□□ -0.41
CD4-207ENST00000536610 FER1L6Q2WGJ9 1857 aa12.46□□□□□ -0.41
CD4-207ENST00000536610 UBE3BQ7Z3V4 1068 aa12.46□□□□□ -0.41
CD4-207ENST00000536610 TRMT2AQ8IZ69 625 aaKnown RBP12.46□□□□□ -0.41
CD4-207ENST00000536610 RTKN2Q8IZC4 609 aa12.46□□□□□ -0.41
CD4-207ENST00000536610 CELF1Q92879 486 aaKnown RBP12.46□□□□□ -0.41
CD4-207ENST00000536610 TMX4Q9H1E5 349 aaPredicted RBP12.46□□□□□ -0.41
CD4-207ENST00000536610 SEC31BQ9NQW1 1179 aa12.46□□□□□ -0.41
CD4-207ENST00000536610 RIC1Q4ADV7 1423 aa12.45□□□□□ -0.42
CD4-207ENST00000536610 PDE8AO60658 829 aa12.45□□□□□ -0.42
CD4-207ENST00000536610 BBOX1O75936 387 aa12.45□□□□□ -0.42
CD4-207ENST00000536610 FKBP4Q02790 459 aaKnown RBP eCLIP12.45□□□□□ -0.42
CD4-207ENST00000536610 GRAPQ13588 217 aa12.45□□□□□ -0.42
CD4-207ENST00000536610 GCKRQ14397 625 aa12.45□□□□□ -0.42
CD4-207ENST00000536610 SF3B3Q15393 1217 aaKnown RBP12.45□□□□□ -0.42
CD4-207ENST00000536610 GRAPLQ8TC17 118 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms