RNA–Protein interactions for RNA: ENST00000536265.5

DDX11-208, Transcript of DEAD/H-box helicase 11, human

TSL 5

Gene DDX11, Length 3,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-208	ENST00000536265	TNNI3K	Q59H18	835 aa		13.87	□□□□□ -0.19
DDX11-208	ENST00000536265	FPGT-TNNI3K	V9GXZ4	949 aa		13.87	□□□□□ -0.19
DDX11-208	ENST00000536265	PTPN12	Q05209	780 aa	Known RBP	13.86	□□□□□ -0.19
DDX11-208	ENST00000536265	MCTP1	Q6DN14	999 aa		13.86	□□□□□ -0.19
DDX11-208	ENST00000536265	FAM89A	Q96GI7	184 aa		13.86	□□□□□ -0.19
DDX11-208	ENST00000536265	JAKMIP1	Q96N16	626 aa	Known RBP	13.86	□□□□□ -0.19
DDX11-208	ENST00000536265	CAST	P20810	708 aa	Known RBP	13.85	□□□□□ -0.19
DDX11-208	ENST00000536265	RAB3GAP1	Q15042	981 aa		13.85	□□□□□ -0.19
DDX11-208	ENST00000536265	ZGPAT	Q8N5A5	531 aa	Known RBP	13.85	□□□□□ -0.19
DDX11-208	ENST00000536265	DDX49	Q9Y6V7	483 aa	Known RBP	13.85	□□□□□ -0.19
DDX11-208	ENST00000536265	NMI	Q13287	307 aa	Predicted RBP	13.85	□□□□□ -0.19
DDX11-208	ENST00000536265	TCIRG1	Q13488	830 aa		13.85	□□□□□ -0.19
DDX11-208	ENST00000536265	HSP90AB3P	Q58FF7	597 aa		13.85	□□□□□ -0.19
DDX11-208	ENST00000536265	DBNDD2	Q9BQY9	259 aa		13.85	□□□□□ -0.19
DDX11-208	ENST00000536265	TBC1D2B	Q9UPU7	963 aa		13.85	□□□□□ -0.19
DDX11-208	ENST00000536265	RAD50	Q92878	1312 aa		13.85	□□□□□ -0.19
DDX11-208	ENST00000536265	IFIT5	Q13325	482 aa	Known RBP	13.85	□□□□□ -0.19
DDX11-208	ENST00000536265	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.85	□□□□□ -0.19
DDX11-208	ENST00000536265	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.85	□□□□□ -0.19
DDX11-208	ENST00000536265	ZNF594	Q96JF6	807 aa	Predicted RBP	13.85	□□□□□ -0.19
DDX11-208	ENST00000536265	ATG3	Q9NT62	314 aa		13.85	□□□□□ -0.19
DDX11-208	ENST00000536265	ABCC6	O95255	1503 aa		13.84	□□□□□ -0.19
DDX11-208	ENST00000536265	HSPA4	P34932	840 aa		13.84	□□□□□ -0.19
DDX11-208	ENST00000536265	IL15	P40933	162 aa	Predicted RBP	13.84	□□□□□ -0.19
DDX11-208	ENST00000536265	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.84	□□□□□ -0.19
DDX11-208	ENST00000536265	L1TD1	Q5T7N2	865 aa	Known RBP	13.84	□□□□□ -0.19
DDX11-208	ENST00000536265	TRMT112	Q9UI30	125 aa	Known RBP	13.84	□□□□□ -0.19
DDX11-208	ENST00000536265	CYP46A1	Q9Y6A2	500 aa		13.84	□□□□□ -0.19
DDX11-208	ENST00000536265	GOLGA6L3	A6NEY3	463 aa		13.84	□□□□□ -0.19
DDX11-208	ENST00000536265	FAM227B	Q96M60	508 aa		13.84	□□□□□ -0.19
DDX11-208	ENST00000536265	LARP6	Q9BRS8	491 aa	Known RBP	13.84	□□□□□ -0.19
DDX11-208	ENST00000536265		H7C1W4	665 aa		13.84	□□□□□ -0.19
DDX11-208	ENST00000536265	TPRN	Q4KMQ1	711 aa		13.84	□□□□□ -0.19
DDX11-208	ENST00000536265	DDX46	Q7L014	1031 aa	Known RBP	13.84	□□□□□ -0.19
DDX11-208	ENST00000536265	NGLY1	Q96IV0	654 aa		13.84	□□□□□ -0.19
DDX11-208	ENST00000536265	CNNM1	Q9NRU3	951 aa		13.84	□□□□□ -0.19
DDX11-208	ENST00000536265	EDC3	Q96F86	508 aa	Known RBP	13.83	□□□□□ -0.19
DDX11-208	ENST00000536265	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.83	□□□□□ -0.19
DDX11-208	ENST00000536265	NDUFB9	Q9Y6M9	179 aa		13.83	□□□□□ -0.19
DDX11-208	ENST00000536265	UBAP1L	F5GYI3	381 aa		13.83	□□□□□ -0.2
DDX11-208	ENST00000536265	TIMM10	P62072	90 aa		13.83	□□□□□ -0.2
DDX11-208	ENST00000536265	CCDC158	Q5M9N0	1113 aa		13.83	□□□□□ -0.2
DDX11-208	ENST00000536265	PSMA5	P28066	241 aa		13.83	□□□□□ -0.2
DDX11-208	ENST00000536265	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
DDX11-208	ENST00000536265	EYA2	O00167	538 aa		13.82	□□□□□ -0.2
DDX11-208	ENST00000536265	LRP10	Q7Z4F1	713 aa		13.82	□□□□□ -0.2
DDX11-208	ENST00000536265	DZIP3	Q86Y13	1208 aa	Known RBP	13.82	□□□□□ -0.2
DDX11-208	ENST00000536265	VSIG10	Q8N0Z9	540 aa		13.82	□□□□□ -0.2
DDX11-208	ENST00000536265	DBNL	Q9UJU6	430 aa	Known RBP	13.82	□□□□□ -0.2
DDX11-208	ENST00000536265	GOLIM4	O00461	696 aa		13.82	□□□□□ -0.2
DDX11-208	ENST00000536265	IFIT1	P09914	478 aa	Known RBP	13.82	□□□□□ -0.2
DDX11-208	ENST00000536265	ATP6V1A	P38606	617 aa		13.82	□□□□□ -0.2
DDX11-208	ENST00000536265	TTC39A	Q5SRH9	613 aa		13.82	□□□□□ -0.2
DDX11-208	ENST00000536265	IL25	Q9H293	177 aa		13.82	□□□□□ -0.2
DDX11-208	ENST00000536265	PDRG1	Q9NUG6	133 aa		13.82	□□□□□ -0.2
DDX11-208	ENST00000536265	RBM8A	Q9Y5S9	174 aa	Known RBP	13.82	□□□□□ -0.2
DDX11-208	ENST00000536265	SNX14	Q9Y5W7	946 aa		13.82	□□□□□ -0.2
DDX11-208	ENST00000536265	EPB41L2	O43491	1005 aa	Known RBP	13.82	□□□□□ -0.2
DDX11-208	ENST00000536265	SMC3	Q9UQE7	1217 aa		13.82	□□□□□ -0.2
DDX11-208	ENST00000536265	USP42	Q9H9J4	1324 aa	Known RBP	13.82	□□□□□ -0.2
DDX11-208	ENST00000536265	COL18A1	P39060	1754 aa		13.81	□□□□□ -0.2
DDX11-208	ENST00000536265	RABL6	Q3YEC7	729 aa	Predicted RBP	13.81	□□□□□ -0.2
DDX11-208	ENST00000536265	METTL24	Q5JXM2	366 aa		13.81	□□□□□ -0.2
DDX11-208	ENST00000536265	LSG1	Q9H089	658 aa	Known RBP	13.81	□□□□□ -0.2
DDX11-208	ENST00000536265	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.81	□□□□□ -0.2
DDX11-208	ENST00000536265	STRC	Q7RTU9	1775 aa		13.81	□□□□□ -0.2
DDX11-208	ENST00000536265	CCDC171	Q6TFL3	1326 aa		13.81	□□□□□ -0.2
DDX11-208	ENST00000536265	ATP5J	P18859	108 aa		13.81	□□□□□ -0.2
DDX11-208	ENST00000536265	AKAP2	Q9Y2D5	859 aa		13.81	□□□□□ -0.2
DDX11-208	ENST00000536265	ZBTB1	Q9Y2K1	713 aa		13.81	□□□□□ -0.2
DDX11-208	ENST00000536265	SCN11A	Q9UI33	1791 aa		13.81	□□□□□ -0.2
DDX11-208	ENST00000536265	PTH1R	Q03431	593 aa		13.81	□□□□□ -0.2
DDX11-208	ENST00000536265	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.81	□□□□□ -0.2
DDX11-208	ENST00000536265	LDHAL6A	Q6ZMR3	332 aa		13.81	□□□□□ -0.2
DDX11-208	ENST00000536265	C8orf37	Q96NL8	207 aa		13.81	□□□□□ -0.2
DDX11-208	ENST00000536265	BAG4	O95429	457 aa	Known RBP	13.8	□□□□□ -0.2
DDX11-208	ENST00000536265	LRRC24	Q50LG9	513 aa		13.8	□□□□□ -0.2
DDX11-208	ENST00000536265	MAP3K15	Q6ZN16	1313 aa		13.8	□□□□□ -0.2
DDX11-208	ENST00000536265	CPA1	P15085	419 aa		13.8	□□□□□ -0.2
DDX11-208	ENST00000536265	GTF2E1	P29083	439 aa	Predicted RBP	13.8	□□□□□ -0.2
DDX11-208	ENST00000536265	WASHC4	Q2M389	1173 aa		13.8	□□□□□ -0.2
DDX11-208	ENST00000536265	BLOC1S2	Q6QNY1	142 aa		13.8	□□□□□ -0.2
DDX11-208	ENST00000536265	LIMCH1	Q9UPQ0	1083 aa		13.8	□□□□□ -0.2
DDX11-208	ENST00000536265	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.8	□□□□□ -0.2
DDX11-208	ENST00000536265	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.8	□□□□□ -0.2
DDX11-208	ENST00000536265	HSP90B1	P14625	803 aa	Known RBP	13.79	□□□□□ -0.2
DDX11-208	ENST00000536265	FOXO4	P98177	505 aa		13.79	□□□□□ -0.2
DDX11-208	ENST00000536265		A0A1B0GUL7	405 aa		13.79	□□□□□ -0.2
DDX11-208	ENST00000536265	ANKRD18B	A2A2Z9	1011 aa		13.79	□□□□□ -0.2
DDX11-208	ENST00000536265	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.79	□□□□□ -0.2
DDX11-208	ENST00000536265	RASEF	Q8IZ41	740 aa		13.79	□□□□□ -0.2
DDX11-208	ENST00000536265	SNRK	Q9NRH2	765 aa		13.79	□□□□□ -0.2
DDX11-208	ENST00000536265		A0A0D9SFI3	127 aa		13.79	□□□□□ -0.2
DDX11-208	ENST00000536265	NPHP1	O15259	732 aa		13.79	□□□□□ -0.2
DDX11-208	ENST00000536265	RFX5	P48382	616 aa	Predicted RBP	13.79	□□□□□ -0.2
DDX11-208	ENST00000536265	IRS4	O14654	1257 aa	Predicted RBP	13.78	□□□□□ -0.2
DDX11-208	ENST00000536265	PRPF40A	O75400	957 aa	Known RBP	13.78	□□□□□ -0.2
DDX11-208	ENST00000536265	ANP32B	Q92688	251 aa	Known RBP	13.78	□□□□□ -0.2
DDX11-208	ENST00000536265	MRC1	P22897	1456 aa		13.78	□□□□□ -0.2
DDX11-208	ENST00000536265	PCCA	P05165	728 aa	Predicted RBP	13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms