RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 CALCOCO1Q9P1Z2 691 aa8.2□□□□□ -1.1
CPSF7-215ENST00000536145 TPCN1Q9ULQ1 816 aa8.2□□□□□ -1.1
CPSF7-215ENST00000536145 PPP6R1Q9UPN7 881 aa8.2□□□□□ -1.1
CPSF7-215ENST00000536145 TTC41PQ6P2S7 1318 aa8.2□□□□□ -1.1
CPSF7-215ENST00000536145 PRR36Q9H6K5 1346 aa8.2□□□□□ -1.1
CPSF7-215ENST00000536145 CACNA1FO60840 1977 aa8.19□□□□□ -1.1
CPSF7-215ENST00000536145 RIMS1Q86UR5 1692 aaKnown RBP8.19□□□□□ -1.1
CPSF7-215ENST00000536145 ZRANB2O95218 330 aaKnown RBP eCLIP8.19□□□□□ -1.1
CPSF7-215ENST00000536145 SLU7O95391 586 aaKnown RBP8.19□□□□□ -1.1
CPSF7-215ENST00000536145 CASTP20810 708 aaKnown RBP8.19□□□□□ -1.1
CPSF7-215ENST00000536145 PLA2G4AP47712 749 aa8.19□□□□□ -1.1
CPSF7-215ENST00000536145 KCNJ4P48050 445 aa8.19□□□□□ -1.1
CPSF7-215ENST00000536145 KCNJ6P48051 423 aa8.19□□□□□ -1.1
CPSF7-215ENST00000536145 PDE4CQ08493 712 aa8.19□□□□□ -1.1
CPSF7-215ENST00000536145 ARID5BQ14865 1188 aa8.19□□□□□ -1.1
CPSF7-215ENST00000536145 MTHFSDQ2M296 383 aaKnown RBP8.19□□□□□ -1.1
CPSF7-215ENST00000536145 CCAR2Q8N163 923 aaKnown RBP8.19□□□□□ -1.1
CPSF7-215ENST00000536145 JAKMIP1Q96N16 626 aaKnown RBP8.19□□□□□ -1.1
CPSF7-215ENST00000536145 TRIM5Q9C035 493 aa8.19□□□□□ -1.1
CPSF7-215ENST00000536145 SCAND2PQ9GZW5 306 aaPredicted RBP8.19□□□□□ -1.1
CPSF7-215ENST00000536145 OSBPL5Q9H0X9 879 aaPredicted RBP8.19□□□□□ -1.1
CPSF7-215ENST00000536145 BABAM1Q9NWV8 329 aa8.19□□□□□ -1.1
CPSF7-215ENST00000536145 CLIP2Q9UDT6 1046 aa8.19□□□□□ -1.1
CPSF7-215ENST00000536145 TSPYL4Q9UJ04 414 aa8.19□□□□□ -1.1
CPSF7-215ENST00000536145 NAP1L2Q9ULW6 460 aaPredicted RBP8.19□□□□□ -1.1
CPSF7-215ENST00000536145 FHOD1Q9Y613 1164 aa8.19□□□□□ -1.1
CPSF7-215ENST00000536145 NPHP4O75161 1426 aaPredicted RBP8.19□□□□□ -1.1
CPSF7-215ENST00000536145 DIP2AQ14689 1571 aa8.18□□□□□ -1.1
CPSF7-215ENST00000536145 FMN2Q9NZ56 1722 aa8.18□□□□□ -1.1
CPSF7-215ENST00000536145 KIF2AO00139 706 aaPredicted RBP8.18□□□□□ -1.1
CPSF7-215ENST00000536145 MAP4K4O95819 1239 aaPredicted RBP8.18□□□□□ -1.1
CPSF7-215ENST00000536145 ADD1P35611 737 aaKnown RBP8.18□□□□□ -1.1
CPSF7-215ENST00000536145 ZNF165P49910 485 aa8.18□□□□□ -1.1
CPSF7-215ENST00000536145 MTX1Q13505 466 aa8.18□□□□□ -1.1
CPSF7-215ENST00000536145 COL9A3Q14050 684 aaPredicted RBP8.18□□□□□ -1.1
CPSF7-215ENST00000536145 BMS1Q14692 1282 aaKnown RBP8.18□□□□□ -1.1
CPSF7-215ENST00000536145 PTPN14Q15678 1187 aa8.18□□□□□ -1.1
CPSF7-215ENST00000536145 ELF2Q15723 593 aa8.18□□□□□ -1.1
CPSF7-215ENST00000536145 CAMK4Q16566 473 aa8.18□□□□□ -1.1
CPSF7-215ENST00000536145 TSGA10IPQ3SY00 556 aa8.18□□□□□ -1.1
CPSF7-215ENST00000536145 CCDC30Q5VVM6 783 aa8.18□□□□□ -1.1
CPSF7-215ENST00000536145 LARP1BQ659C4 914 aaKnown RBP8.18□□□□□ -1.1
CPSF7-215ENST00000536145 FAM173BQ6P4H8 233 aa8.18□□□□□ -1.1
CPSF7-215ENST00000536145 C11orf57Q6ZUT1 292 aaPredicted RBP8.18□□□□□ -1.1
CPSF7-215ENST00000536145 PPP1R42Q7Z4L9 355 aa8.18□□□□□ -1.1
CPSF7-215ENST00000536145 CKAP2LQ8IYA6 745 aa8.18□□□□□ -1.1
CPSF7-215ENST00000536145 NECAB1Q8N987 351 aa8.18□□□□□ -1.1
CPSF7-215ENST00000536145 MAP4K1Q92918 833 aa8.18□□□□□ -1.1
CPSF7-215ENST00000536145 DNAJC25Q9H1X3 360 aa8.18□□□□□ -1.1
CPSF7-215ENST00000536145 ST7Q9NRC1 585 aa8.18□□□□□ -1.1
CPSF7-215ENST00000536145 MIS18AQ9NYP9 233 aa8.18□□□□□ -1.1
CPSF7-215ENST00000536145 CYP46A1Q9Y6A2 500 aa8.18□□□□□ -1.1
CPSF7-215ENST00000536145 CCDC61Q9Y6R9 512 aa8.18□□□□□ -1.1
CPSF7-215ENST00000536145 MAP3K19Q56UN5 1328 aa8.18□□□□□ -1.1
CPSF7-215ENST00000536145 NWD1Q149M9 1564 aa8.18□□□□□ -1.1
CPSF7-215ENST00000536145 CEP170BQ9Y4F5 1589 aaPredicted RBP8.18□□□□□ -1.1
CPSF7-215ENST00000536145 VPS37CA5D8V6 355 aaPredicted RBP8.17□□□□□ -1.1
CPSF7-215ENST00000536145 CCDC69A6NI79 296 aa8.17□□□□□ -1.1
CPSF7-215ENST00000536145 SLC27A2O14975 620 aa8.17□□□□□ -1.1
CPSF7-215ENST00000536145 FOXO3O43524 673 aa8.17□□□□□ -1.1
CPSF7-215ENST00000536145 DTNBO60941 627 aa8.17□□□□□ -1.1
CPSF7-215ENST00000536145 NR1I2O75469 434 aa8.17□□□□□ -1.1
CPSF7-215ENST00000536145 SURF6O75683 361 aaKnown RBP8.17□□□□□ -1.1
CPSF7-215ENST00000536145 GLRX3O76003 335 aaKnown RBP8.17□□□□□ -1.1
CPSF7-215ENST00000536145 UBTFL1P0CB47 393 aaPredicted RBP8.17□□□□□ -1.1
CPSF7-215ENST00000536145 PDCP20941 246 aa8.17□□□□□ -1.1
CPSF7-215ENST00000536145 TOB2Q14106 344 aaPredicted RBP8.17□□□□□ -1.1
CPSF7-215ENST00000536145 MUM1L1Q5H9M0 696 aa8.17□□□□□ -1.1
CPSF7-215ENST00000536145 CREB3L3Q68CJ9 461 aa8.17□□□□□ -1.1
CPSF7-215ENST00000536145 PRPF40BQ6NWY9 871 aaKnown RBP8.17□□□□□ -1.1
CPSF7-215ENST00000536145 LARP1Q6PKG0 1096 aaKnown RBP8.17□□□□□ -1.1
CPSF7-215ENST00000536145 NBPF11Q86T75 865 aa8.17□□□□□ -1.1
CPSF7-215ENST00000536145 DHX40Q8IX18 779 aaKnown RBP8.17□□□□□ -1.1
CPSF7-215ENST00000536145 RUFY2Q8WXA3 655 aa8.17□□□□□ -1.1
CPSF7-215ENST00000536145 STK31Q9BXU1 1019 aa8.17□□□□□ -1.1
CPSF7-215ENST00000536145 SPG7Q9UQ90 795 aa8.17□□□□□ -1.1
CPSF7-215ENST00000536145 RBM8AQ9Y5S9 174 aaKnown RBP8.17□□□□□ -1.1
CPSF7-215ENST00000536145 IGSF1Q8N6C5 1336 aa8.17□□□□□ -1.1
CPSF7-215ENST00000536145 MED23Q9ULK4 1368 aa8.17□□□□□ -1.1
CPSF7-215ENST00000536145 ABCC6O95255 1503 aa8.17□□□□□ -1.1
CPSF7-215ENST00000536145 MED1Q15648 1581 aaPredicted RBP8.17□□□□□ -1.1
CPSF7-215ENST00000536145 PLEKHG3A1L390 1219 aa8.16□□□□□ -1.1
CPSF7-215ENST00000536145 PSDA5PKW4 1024 aaPredicted RBP8.16□□□□□ -1.1
CPSF7-215ENST00000536145 CTAGE5O15320 804 aa8.16□□□□□ -1.1
CPSF7-215ENST00000536145 TUBB4AP04350 444 aa8.16□□□□□ -1.1
CPSF7-215ENST00000536145 METP08581 1390 aa8.16□□□□□ -1.1
CPSF7-215ENST00000536145 SKILP12757 684 aa8.16□□□□□ -1.1
CPSF7-215ENST00000536145 RPS6KB1P23443 525 aa8.16□□□□□ -1.1
CPSF7-215ENST00000536145 HNRNPH2P55795 449 aaKnown RBP8.16□□□□□ -1.1
CPSF7-215ENST00000536145 STX1AQ16623 288 aa8.16□□□□□ -1.1
CPSF7-215ENST00000536145 E4F1Q66K89 784 aaPredicted RBP8.16□□□□□ -1.1
CPSF7-215ENST00000536145 CWC27Q6UX04 472 aaKnown RBP8.16□□□□□ -1.1
CPSF7-215ENST00000536145 DRC7Q8IY82 874 aa8.16□□□□□ -1.1
CPSF7-215ENST00000536145 NFATC2IPQ8NCF5 419 aa8.16□□□□□ -1.1
CPSF7-215ENST00000536145 LRRN4CLQ8ND94 238 aa8.16□□□□□ -1.1
CPSF7-215ENST00000536145 ENGASEQ8NFI3 743 aa8.16□□□□□ -1.1
CPSF7-215ENST00000536145 PTPRUQ92729 1446 aa8.16□□□□□ -1.1
CPSF7-215ENST00000536145 SPATA32Q96LK8 384 aa8.16□□□□□ -1.1
CPSF7-215ENST00000536145 DNAJC2Q99543 621 aaKnown RBP8.16□□□□□ -1.1
CPSF7-215ENST00000536145 NCKAP5LQ9HCH0 1330 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms