RNA–Protein interactions for RNA: ENST00000536000.1

VPS37C-203, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-203ENST00000536000 ISCA1Q9BUE6 129 aa16.36■□□□□ 0.21
VPS37C-203ENST00000536000 ZNF521Q96K83 1311 aa16.36■□□□□ 0.21
VPS37C-203ENST00000536000 IBTKQ9P2D0 1353 aaPredicted RBP16.36■□□□□ 0.21
VPS37C-203ENST00000536000 C21orf2O43822 256 aa16.35■□□□□ 0.21
VPS37C-203ENST00000536000 ZNF784Q8NCA9 323 aaPredicted RBP16.35■□□□□ 0.21
VPS37C-203ENST00000536000 TRIM28Q13263 835 aaKnown RBP16.34■□□□□ 0.21
VPS37C-203ENST00000536000 KSR2Q6VAB6 950 aa16.34■□□□□ 0.21
VPS37C-203ENST00000536000 RPGRQ92834 1020 aaKnown RBP16.34■□□□□ 0.21
VPS37C-203ENST00000536000 MYD88Q99836 296 aa16.34■□□□□ 0.21
VPS37C-203ENST00000536000 RNF123Q5XPI4 1314 aa16.34■□□□□ 0.21
VPS37C-203ENST00000536000 ARFGEF1Q9Y6D6 1849 aa16.33■□□□□ 0.21
VPS37C-203ENST00000536000 E9PSI1 815 aa16.33■□□□□ 0.2
VPS37C-203ENST00000536000 PRPF40BQ6NWY9 871 aaKnown RBP16.33■□□□□ 0.2
VPS37C-203ENST00000536000 G2E3Q7L622 706 aa16.33■□□□□ 0.2
VPS37C-203ENST00000536000 ZNF428Q96B54 188 aa16.33■□□□□ 0.2
VPS37C-203ENST00000536000 SH3TC1Q8TE82 1336 aa16.33■□□□□ 0.2
VPS37C-203ENST00000536000 ABCC12Q96J65 1359 aa16.33■□□□□ 0.2
VPS37C-203ENST00000536000 PI4KAP2A4QPH2 592 aa16.32■□□□□ 0.2
VPS37C-203ENST00000536000 HCLS1P14317 486 aaPredicted RBP16.32■□□□□ 0.2
VPS37C-203ENST00000536000 CRY2Q49AN0 593 aa16.32■□□□□ 0.2
VPS37C-203ENST00000536000 SOGA3Q5TF21 947 aa16.32■□□□□ 0.2
VPS37C-203ENST00000536000 C9orf131Q5VYM1 1079 aa16.32■□□□□ 0.2
VPS37C-203ENST00000536000 SYNE4Q8N205 404 aa16.32■□□□□ 0.2
VPS37C-203ENST00000536000 PI4KAP1Q8N8J0 262 aa16.32■□□□□ 0.2
VPS37C-203ENST00000536000 RBM17Q96I25 401 aaKnown RBP16.32■□□□□ 0.2
VPS37C-203ENST00000536000 METTL22Q9BUU2 404 aaPredicted RBP16.32■□□□□ 0.2
VPS37C-203ENST00000536000 MAP3K2Q9Y2U5 619 aa16.32■□□□□ 0.2
VPS37C-203ENST00000536000 HOXA10P31260 410 aaPredicted RBP16.31■□□□□ 0.2
VPS37C-203ENST00000536000 SLFN5Q08AF3 891 aa16.31■□□□□ 0.2
VPS37C-203ENST00000536000 CCDC191Q8NCU4 936 aa16.31■□□□□ 0.2
VPS37C-203ENST00000536000 FAM89AQ96GI7 184 aa16.31■□□□□ 0.2
VPS37C-203ENST00000536000 RASSF7Q02833 373 aa16.3■□□□□ 0.2
VPS37C-203ENST00000536000 NEXNQ0ZGT2 675 aa16.3■□□□□ 0.2
VPS37C-203ENST00000536000 FLIIQ13045 1269 aa16.3■□□□□ 0.2
VPS37C-203ENST00000536000 C7orf43Q8WVR3 580 aa16.3■□□□□ 0.2
VPS37C-203ENST00000536000 CRAMP1Q96RY5 1269 aa16.3■□□□□ 0.2
VPS37C-203ENST00000536000 RNF181Q9P0P0 153 aa16.3■□□□□ 0.2
VPS37C-203ENST00000536000 DLEC1Q9Y238 1755 aa16.3■□□□□ 0.2
VPS37C-203ENST00000536000 SLX4Q8IY92 1834 aa16.29■□□□□ 0.2
VPS37C-203ENST00000536000 FKBP5Q13451 457 aaPredicted RBP16.29■□□□□ 0.2
VPS37C-203ENST00000536000 RTL5Q5HYW3 569 aaPredicted RBP16.29■□□□□ 0.2
VPS37C-203ENST00000536000 C3orf67Q6ZVT6 689 aa16.29■□□□□ 0.2
VPS37C-203ENST00000536000 CDCA7LQ96GN5 454 aa16.29■□□□□ 0.2
VPS37C-203ENST00000536000 CWC25Q9NXE8 425 aaPredicted RBP16.29■□□□□ 0.2
VPS37C-203ENST00000536000 RIC1Q4ADV7 1423 aa16.28■□□□□ 0.2
VPS37C-203ENST00000536000 HSP90B1P14625 803 aaKnown RBP16.28■□□□□ 0.2
VPS37C-203ENST00000536000 LMNB1P20700 586 aa16.28■□□□□ 0.2
VPS37C-203ENST00000536000 CCDC93Q567U6 631 aa16.28■□□□□ 0.2
VPS37C-203ENST00000536000 ZBTB38Q8NAP3 1195 aaPredicted RBP16.28■□□□□ 0.2
VPS37C-203ENST00000536000 CACNA1FO60840 1977 aa16.27■□□□□ 0.2
VPS37C-203ENST00000536000 NFKBIEO00221 500 aa16.27■□□□□ 0.2
VPS37C-203ENST00000536000 IRS4O14654 1257 aaPredicted RBP16.27■□□□□ 0.2
VPS37C-203ENST00000536000 CC2D2BQ6DHV5 1058 aa16.27■□□□□ 0.2
VPS37C-203ENST00000536000 DDX46Q7L014 1031 aaKnown RBP16.27■□□□□ 0.2
VPS37C-203ENST00000536000 RTKN2Q8IZC4 609 aa16.27■□□□□ 0.2
VPS37C-203ENST00000536000 ZNF526Q8TF50 670 aaPredicted RBP16.27■□□□□ 0.2
VPS37C-203ENST00000536000 TMX4Q9H1E5 349 aaPredicted RBP16.27■□□□□ 0.2
VPS37C-203ENST00000536000 ANKRD36CQ5JPF3 1778 aa16.27■□□□□ 0.2
VPS37C-203ENST00000536000 COL11A2P13942 1736 aaPredicted RBP16.27■□□□□ 0.19
VPS37C-203ENST00000536000 PCCAP05165 728 aaPredicted RBP16.26■□□□□ 0.19
VPS37C-203ENST00000536000 DNAAF4Q8WXU2 420 aa16.26■□□□□ 0.19
VPS37C-203ENST00000536000 TAOK3Q9H2K8 898 aa16.26■□□□□ 0.19
VPS37C-203ENST00000536000 GPBP1L1Q9HC44 474 aaPredicted RBP16.26■□□□□ 0.19
VPS37C-203ENST00000536000 ADCY9O60503 1353 aa16.26■□□□□ 0.19
VPS37C-203ENST00000536000 BBOX1O75936 387 aa16.25■□□□□ 0.19
VPS37C-203ENST00000536000 IGKV5-2P06315 115 aa16.25■□□□□ 0.19
VPS37C-203ENST00000536000 SF3B3Q15393 1217 aaKnown RBP16.25■□□□□ 0.19
VPS37C-203ENST00000536000 OLFM4Q6UX06 510 aa16.25■□□□□ 0.19
VPS37C-203ENST00000536000 TRMT2AQ8IZ69 625 aaKnown RBP16.25■□□□□ 0.19
VPS37C-203ENST00000536000 JARID2Q92833 1246 aaPredicted RBP16.25■□□□□ 0.19
VPS37C-203ENST00000536000 LTBP3Q9NS15 1303 aa16.24■□□□□ 0.19
VPS37C-203ENST00000536000 ARFGEF2Q9Y6D5 1785 aa16.24■□□□□ 0.19
VPS37C-203ENST00000536000 PRELPP51888 382 aa16.24■□□□□ 0.19
VPS37C-203ENST00000536000 CWF19L2Q2TBE0 894 aaKnown RBP16.24■□□□□ 0.19
VPS37C-203ENST00000536000 GRIPAP1Q4V328 841 aa16.24■□□□□ 0.19
VPS37C-203ENST00000536000 SBF1O95248 1867 aa16.24■□□□□ 0.19
VPS37C-203ENST00000536000 CACNA1SQ13698 1873 aa16.23■□□□□ 0.19
VPS37C-203ENST00000536000 NEURL1BA8MQ27 555 aa16.23■□□□□ 0.19
VPS37C-203ENST00000536000 PPEF1O14829 653 aaPredicted RBP16.23■□□□□ 0.19
VPS37C-203ENST00000536000 PDE8AO60658 829 aa16.23■□□□□ 0.19
VPS37C-203ENST00000536000 FKBP4Q02790 459 aaKnown RBP eCLIP16.23■□□□□ 0.19
VPS37C-203ENST00000536000 TNRC6CQ9HCJ0 1690 aaKnown RBP16.23■□□□□ 0.19
VPS37C-203ENST00000536000 ABCC4O15439 1325 aa16.22■□□□□ 0.19
VPS37C-203ENST00000536000 F6X3S4 739 aa16.22■□□□□ 0.19
VPS37C-203ENST00000536000 HNRNPUQ00839 825 aaKnown RBP eCLIP16.22■□□□□ 0.19
VPS37C-203ENST00000536000 GRAPQ13588 217 aa16.22■□□□□ 0.19
VPS37C-203ENST00000536000 MRPL50Q8N5N7 158 aaKnown RBP16.22■□□□□ 0.19
VPS37C-203ENST00000536000 LINS1Q8NG48 757 aa16.22■□□□□ 0.19
VPS37C-203ENST00000536000 GRAPLQ8TC17 118 aaPredicted RBP16.22■□□□□ 0.19
VPS37C-203ENST00000536000 CCDC88AQ3V6T2 1871 aa16.21■□□□□ 0.19
VPS37C-203ENST00000536000 H7C1W4 665 aa16.21■□□□□ 0.19
VPS37C-203ENST00000536000 GCKRQ14397 625 aa16.21■□□□□ 0.19
VPS37C-203ENST00000536000 SP8Q8IXZ3 490 aa16.21■□□□□ 0.19
VPS37C-203ENST00000536000 ATP6V0A2Q9Y487 856 aa16.21■□□□□ 0.19
VPS37C-203ENST00000536000 CDHR2Q9BYE9 1310 aa16.2■□□□□ 0.18
VPS37C-203ENST00000536000 ZC3H4Q9UPT8 1303 aaKnown RBP16.2■□□□□ 0.18
VPS37C-203ENST00000536000 CT47B1P0C2W7 299 aaPredicted RBP16.2■□□□□ 0.18
VPS37C-203ENST00000536000 CCDC152Q4G0S7 254 aa16.2■□□□□ 0.18
VPS37C-203ENST00000536000 DPY19L2Q6NUT2 758 aa16.2■□□□□ 0.18
VPS37C-203ENST00000536000 TMC4Q7Z404 712 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms