RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 COL11A2P13942 1736 aaPredicted RBP16.35■□□□□ 0.21
DDB1-207ENST00000535967 SERPINB2P05120 415 aa16.35■□□□□ 0.21
DDB1-207ENST00000535967 HDGFL1Q5TGJ6 251 aa16.35■□□□□ 0.21
DDB1-207ENST00000535967 ZBED9Q6R2W3 1325 aa16.34■□□□□ 0.21
DDB1-207ENST00000535967 NBPF26B4DH59 902 aa16.34■□□□□ 0.21
DDB1-207ENST00000535967 NFKBIEO00221 500 aa16.34■□□□□ 0.21
DDB1-207ENST00000535967 NBPF10Q6P3W6 841 aaKnown RBP16.34■□□□□ 0.21
DDB1-207ENST00000535967 NBPF15Q8N660 670 aa16.34■□□□□ 0.21
DDB1-207ENST00000535967 C8orf58Q8NAV2 365 aa16.34■□□□□ 0.21
DDB1-207ENST00000535967 RGL2O15211 777 aa16.33■□□□□ 0.2
DDB1-207ENST00000535967 EIF2S2P20042 333 aaKnown RBP16.33■□□□□ 0.2
DDB1-207ENST00000535967 LMNB1P20700 586 aa16.33■□□□□ 0.2
DDB1-207ENST00000535967 SLFN5Q08AF3 891 aa16.33■□□□□ 0.2
DDB1-207ENST00000535967 TWISTNBQ3B726 338 aaPredicted RBP16.33■□□□□ 0.2
DDB1-207ENST00000535967 RASEFQ8IZ41 740 aa16.33■□□□□ 0.2
DDB1-207ENST00000535967 SMC1BQ8NDV3 1235 aa16.33■□□□□ 0.2
DDB1-207ENST00000535967 GLTPD2A6NH11 291 aa16.32■□□□□ 0.2
DDB1-207ENST00000535967 BICDL1Q6ZP65 573 aa16.32■□□□□ 0.2
DDB1-207ENST00000535967 C2CD5Q86YS7 1000 aa16.32■□□□□ 0.2
DDB1-207ENST00000535967 DDX21Q9NR30 783 aaKnown RBP eCLIP16.32■□□□□ 0.2
DDB1-207ENST00000535967 DBF4Q9UBU7 674 aaPredicted RBP16.32■□□□□ 0.2
DDB1-207ENST00000535967 ZNF330Q9Y3S2 320 aaPredicted RBP16.32■□□□□ 0.2
DDB1-207ENST00000535967 ZC3H4Q9UPT8 1303 aaKnown RBP16.32■□□□□ 0.2
DDB1-207ENST00000535967 PIP4K2AP48426 406 aaPredicted RBP16.31■□□□□ 0.2
DDB1-207ENST00000535967 EXOSC9Q06265 439 aaKnown RBP16.31■□□□□ 0.2
DDB1-207ENST00000535967 DZIP3Q86Y13 1208 aaKnown RBP16.31■□□□□ 0.2
DDB1-207ENST00000535967 TTLL6Q8N841 843 aa16.31■□□□□ 0.2
DDB1-207ENST00000535967 DICER1Q9UPY3 1922 aaKnown RBP16.31■□□□□ 0.2
DDB1-207ENST00000535967 FER1L6Q2WGJ9 1857 aa16.31■□□□□ 0.2
DDB1-207ENST00000535967 POTECB2RU33 542 aa16.3■□□□□ 0.2
DDB1-207ENST00000535967 ELL2O00472 640 aaPredicted RBP16.3■□□□□ 0.2
DDB1-207ENST00000535967 PDIA6Q15084 440 aa16.3■□□□□ 0.2
DDB1-207ENST00000535967 CCDC30Q5VVM6 783 aa16.3■□□□□ 0.2
DDB1-207ENST00000535967 TRMT2AQ8IZ69 625 aaKnown RBP16.3■□□□□ 0.2
DDB1-207ENST00000535967 CCDC24Q8N4L8 307 aa16.3■□□□□ 0.2
DDB1-207ENST00000535967 TSPYL6Q8N831 410 aa16.3■□□□□ 0.2
DDB1-207ENST00000535967 RTN4Q9NQC3 1192 aaKnown RBP16.3■□□□□ 0.2
DDB1-207ENST00000535967 CACNA1SQ13698 1873 aa16.3■□□□□ 0.2
DDB1-207ENST00000535967 MYL6BP14649 208 aa16.29■□□□□ 0.2
DDB1-207ENST00000535967 TBC1D9BQ66K14 1250 aa16.29■□□□□ 0.2
DDB1-207ENST00000535967 LRP10Q7Z4F1 713 aa16.29■□□□□ 0.2
DDB1-207ENST00000535967 CHPF2Q9P2E5 772 aa16.29■□□□□ 0.2
DDB1-207ENST00000535967 VEGFAP15692 232 aaPredicted RBP16.28■□□□□ 0.2
DDB1-207ENST00000535967 KIF6Q6ZMV9 814 aa16.28■□□□□ 0.2
DDB1-207ENST00000535967 SP7Q8TDD2 431 aaPredicted RBP16.28■□□□□ 0.2
DDB1-207ENST00000535967 NECTIN2Q92692 538 aa16.28■□□□□ 0.2
DDB1-207ENST00000535967 HYPKQ9NX55 129 aa16.28■□□□□ 0.2
DDB1-207ENST00000535967 ZNF652Q9Y2D9 606 aa16.28■□□□□ 0.2
DDB1-207ENST00000535967 SLX4Q8IY92 1834 aa16.28■□□□□ 0.2
DDB1-207ENST00000535967 H0YIN7 160 aa16.28■□□□□ 0.2
DDB1-207ENST00000535967 CAMTA2O94983 1202 aa16.28■□□□□ 0.2
DDB1-207ENST00000535967 PROSER3Q2NL68 480 aa16.28■□□□□ 0.2
DDB1-207ENST00000535967 CDCA7LQ96GN5 454 aa16.28■□□□□ 0.2
DDB1-207ENST00000535967 STK31Q9BXU1 1019 aa16.28■□□□□ 0.2
DDB1-207ENST00000535967 TBC1D2BQ9UPU7 963 aa16.28■□□□□ 0.2
DDB1-207ENST00000535967 MAP3K15Q6ZN16 1313 aa16.27■□□□□ 0.2
DDB1-207ENST00000535967 LAMB2P55268 1798 aa16.26■□□□□ 0.19
DDB1-207ENST00000535967 ERVV-1B6SEH8 477 aa16.26■□□□□ 0.19
DDB1-207ENST00000535967 C21orf2O43822 256 aa16.26■□□□□ 0.19
DDB1-207ENST00000535967 VAMP4O75379 141 aa16.26■□□□□ 0.19
DDB1-207ENST00000535967 CT47B1P0C2W7 299 aaPredicted RBP16.26■□□□□ 0.19
DDB1-207ENST00000535967 PRR5LQ6MZQ0 368 aa16.26■□□□□ 0.19
DDB1-207ENST00000535967 CLEC4GQ6UXB4 293 aa16.26■□□□□ 0.19
DDB1-207ENST00000535967 ZNF622Q969S3 477 aaKnown RBP eCLIP16.26■□□□□ 0.19
DDB1-207ENST00000535967 ZNF428Q96B54 188 aa16.26■□□□□ 0.19
DDB1-207ENST00000535967 ANXA1P04083 346 aa16.25■□□□□ 0.19
DDB1-207ENST00000535967 TNS4Q8IZW8 715 aa16.25■□□□□ 0.19
DDB1-207ENST00000535967 POTEIP0CG38 1075 aa16.24■□□□□ 0.19
DDB1-207ENST00000535967 POTEJP0CG39 1038 aa16.24■□□□□ 0.19
DDB1-207ENST00000535967 HSPA1AP0DMV8 641 aaKnown RBP16.24■□□□□ 0.19
DDB1-207ENST00000535967 HSPA1BP0DMV9 641 aaKnown RBP16.24■□□□□ 0.19
DDB1-207ENST00000535967 EVX2Q03828 476 aa16.24■□□□□ 0.19
DDB1-207ENST00000535967 TTLL7Q6ZT98 887 aa16.24■□□□□ 0.19
DDB1-207ENST00000535967 XAGE3Q8WTP9 111 aa16.24■□□□□ 0.19
DDB1-207ENST00000535967 COPS6Q7L5N1 327 aa16.23■□□□□ 0.19
DDB1-207ENST00000535967 BRIP1Q9BX63 1249 aa16.23■□□□□ 0.19
DDB1-207ENST00000535967 GIGYF2Q6Y7W6 1299 aaKnown RBP16.22■□□□□ 0.19
DDB1-207ENST00000535967 CIZ1Q9ULV3 898 aaPredicted RBP16.22■□□□□ 0.19
DDB1-207ENST00000535967 IBTKQ9P2D0 1353 aaPredicted RBP16.22■□□□□ 0.19
DDB1-207ENST00000535967 DDX58O95786 925 aaKnown RBP16.21■□□□□ 0.19
DDB1-207ENST00000535967 ERFEQ4G0M1 354 aa16.21■□□□□ 0.19
DDB1-207ENST00000535967 PLBD2Q8NHP8 589 aa16.21■□□□□ 0.19
DDB1-207ENST00000535967 TSPYL2Q9H2G4 693 aaPredicted RBP16.21■□□□□ 0.19
DDB1-207ENST00000535967 ZBTB3Q9H5J0 574 aa16.21■□□□□ 0.19
DDB1-207ENST00000535967 PDE6BP35913 854 aa16.2■□□□□ 0.18
DDB1-207ENST00000535967 AIMP1Q12904 312 aaKnown RBP16.2■□□□□ 0.18
DDB1-207ENST00000535967 HSP90AB3PQ58FF7 597 aa16.2■□□□□ 0.18
DDB1-207ENST00000535967 DDNO94850 711 aaPredicted RBP16.19■□□□□ 0.18
DDB1-207ENST00000535967 HLFQ16534 295 aa16.19■□□□□ 0.18
DDB1-207ENST00000535967 ALDH1L2Q3SY69 923 aa16.19■□□□□ 0.18
DDB1-207ENST00000535967 DCAF8Q5TAQ9 597 aa16.19■□□□□ 0.18
DDB1-207ENST00000535967 ANKRD13DQ6ZTN6 518 aa16.19■□□□□ 0.18
DDB1-207ENST00000535967 FAM212AQ96EL1 285 aa16.19■□□□□ 0.18
DDB1-207ENST00000535967 SETDB2Q96T68 719 aa16.19■□□□□ 0.18
DDB1-207ENST00000535967 PHAXQ9H814 394 aaKnown RBP16.19■□□□□ 0.18
DDB1-207ENST00000535967 MYH3P11055 1940 aa16.19■□□□□ 0.18
DDB1-207ENST00000535967 DDX60Q8IY21 1712 aaKnown RBP16.19■□□□□ 0.18
DDB1-207ENST00000535967 LTBP3Q9NS15 1303 aa16.19■□□□□ 0.18
DDB1-207ENST00000535967 DPY19L2Q6NUT2 758 aa16.19■□□□□ 0.18
DDB1-207ENST00000535967 PRPF40BQ6NWY9 871 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms