RNA–Protein interactions for RNA: ENST00000535954.1

C2CD3-209, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-209ENST00000535954 GLTPD2A6NH11 291 aa11.55□□□□□ -0.56
C2CD3-209ENST00000535954 GNAI1P63096 354 aa11.55□□□□□ -0.56
C2CD3-209ENST00000535954 AIMP1Q12904 312 aaKnown RBP11.55□□□□□ -0.56
C2CD3-209ENST00000535954 NLRP10Q86W26 655 aa11.55□□□□□ -0.56
C2CD3-209ENST00000535954 WWC1Q8IX03 1113 aa11.55□□□□□ -0.56
C2CD3-209ENST00000535954 TSPYL6Q8N831 410 aa11.55□□□□□ -0.56
C2CD3-209ENST00000535954 NYXQ9GZU5 481 aa11.55□□□□□ -0.56
C2CD3-209ENST00000535954 RRAGCQ9HB90 399 aa11.55□□□□□ -0.56
C2CD3-209ENST00000535954 ZC3H4Q9UPT8 1303 aaKnown RBP11.55□□□□□ -0.56
C2CD3-209ENST00000535954 TOMM70O94826 608 aa11.54□□□□□ -0.56
C2CD3-209ENST00000535954 PARP10Q53GL7 1025 aa11.54□□□□□ -0.56
C2CD3-209ENST00000535954 HDGFL1Q5TGJ6 251 aa11.54□□□□□ -0.56
C2CD3-209ENST00000535954 ISCA1Q9BUE6 129 aa11.54□□□□□ -0.56
C2CD3-209ENST00000535954 PHAXQ9H814 394 aaKnown RBP11.54□□□□□ -0.56
C2CD3-209ENST00000535954 DBF4Q9UBU7 674 aaPredicted RBP11.54□□□□□ -0.56
C2CD3-209ENST00000535954 TAF1P21675 1872 aa11.54□□□□□ -0.56
C2CD3-209ENST00000535954 TIAM2Q8IVF5 1701 aa11.54□□□□□ -0.56
C2CD3-209ENST00000535954 ELL2O00472 640 aaPredicted RBP11.53□□□□□ -0.56
C2CD3-209ENST00000535954 NPHP1O15259 732 aa11.53□□□□□ -0.56
C2CD3-209ENST00000535954 ALDH1B1P30837 517 aa11.53□□□□□ -0.56
C2CD3-209ENST00000535954 ANKRD13DQ6ZTN6 518 aa11.53□□□□□ -0.56
C2CD3-209ENST00000535954 PPP1R42Q7Z4L9 355 aa11.53□□□□□ -0.56
C2CD3-209ENST00000535954 PLBD2Q8NHP8 589 aa11.53□□□□□ -0.56
C2CD3-209ENST00000535954 UTP14AQ9BVJ6 771 aaKnown RBP11.53□□□□□ -0.56
C2CD3-209ENST00000535954 ANP32CO43423 234 aa11.52□□□□□ -0.57
C2CD3-209ENST00000535954 GTF2E1P29083 439 aaPredicted RBP11.52□□□□□ -0.57
C2CD3-209ENST00000535954 TRIM28Q13263 835 aaKnown RBP11.52□□□□□ -0.57
C2CD3-209ENST00000535954 CRAMP1Q96RY5 1269 aa11.52□□□□□ -0.57
C2CD3-209ENST00000535954 TAOK3Q9H2K8 898 aa11.52□□□□□ -0.57
C2CD3-209ENST00000535954 MRS2Q9HD23 443 aa11.52□□□□□ -0.57
C2CD3-209ENST00000535954 HYPKQ9NX55 129 aa11.52□□□□□ -0.57
C2CD3-209ENST00000535954 DDX60Q8IY21 1712 aaKnown RBP11.52□□□□□ -0.57
C2CD3-209ENST00000535954 WDR90Q96KV7 1748 aa11.52□□□□□ -0.57
C2CD3-209ENST00000535954 HSPA6P17066 643 aa11.51□□□□□ -0.57
C2CD3-209ENST00000535954 FKBP4Q02790 459 aaKnown RBP eCLIP11.51□□□□□ -0.57
C2CD3-209ENST00000535954 CCDC93Q567U6 631 aa11.51□□□□□ -0.57
C2CD3-209ENST00000535954 HSP90AB3PQ58FF7 597 aa11.51□□□□□ -0.57
C2CD3-209ENST00000535954 SOGA3Q5TF21 947 aa11.51□□□□□ -0.57
C2CD3-209ENST00000535954 TSR2Q969E8 191 aaKnown RBP11.51□□□□□ -0.57
C2CD3-209ENST00000535954 SPINK5Q9NQ38 1064 aaPredicted RBP11.51□□□□□ -0.57
C2CD3-209ENST00000535954 COL4A5P29400 1685 aa11.51□□□□□ -0.57
C2CD3-209ENST00000535954 KDM2BQ8NHM5 1336 aa11.51□□□□□ -0.57
C2CD3-209ENST00000535954 COL4A1P02462 1669 aa11.5□□□□□ -0.57
C2CD3-209ENST00000535954 HCLS1P14317 486 aaPredicted RBP11.5□□□□□ -0.57
C2CD3-209ENST00000535954 CALD1Q05682 793 aaKnown RBP11.5□□□□□ -0.57
C2CD3-209ENST00000535954 DNAJC5GQ8N7S2 189 aa11.5□□□□□ -0.57
C2CD3-209ENST00000535954 RBM46Q8TBY0 533 aaKnown RBP11.5□□□□□ -0.57
C2CD3-209ENST00000535954 ZNF428Q96B54 188 aa11.5□□□□□ -0.57
C2CD3-209ENST00000535954 NLRP3Q96P20 1036 aa11.5□□□□□ -0.57
C2CD3-209ENST00000535954 ZNF277Q9NRM2 450 aaPredicted RBP11.5□□□□□ -0.57
C2CD3-209ENST00000535954 RNF123Q5XPI4 1314 aa11.5□□□□□ -0.57
C2CD3-209ENST00000535954 ATP5J2-PTCD1G3V325 749 aa11.49□□□□□ -0.57
C2CD3-209ENST00000535954 FZD9O00144 591 aa11.49□□□□□ -0.57
C2CD3-209ENST00000535954 DDNO94850 711 aaPredicted RBP11.49□□□□□ -0.57
C2CD3-209ENST00000535954 RTKN2Q8IZC4 609 aa11.49□□□□□ -0.57
C2CD3-209ENST00000535954 RBM17Q96I25 401 aaKnown RBP11.49□□□□□ -0.57
C2CD3-209ENST00000535954 PSMD1Q99460 953 aa11.49□□□□□ -0.57
C2CD3-209ENST00000535954 TRMT112Q9UI30 125 aaKnown RBP11.49□□□□□ -0.57
C2CD3-209ENST00000535954 IL16Q14005 1332 aa11.49□□□□□ -0.57
C2CD3-209ENST00000535954 PCNTO95613 3336 aa11.49□□□□□ -0.57
C2CD3-209ENST00000535954 NPM3O75607 178 aaKnown RBP11.48□□□□□ -0.57
C2CD3-209ENST00000535954 VEGFAP15692 232 aaPredicted RBP11.48□□□□□ -0.57
C2CD3-209ENST00000535954 G2E3Q7L622 706 aa11.48□□□□□ -0.57
C2CD3-209ENST00000535954 WDR63Q8IWG1 891 aa11.48□□□□□ -0.57
C2CD3-209ENST00000535954 FAM89AQ96GI7 184 aa11.48□□□□□ -0.57
C2CD3-209ENST00000535954 ABCC4O15439 1325 aa11.48□□□□□ -0.57
C2CD3-209ENST00000535954 SH3TC1Q8TE82 1336 aa11.48□□□□□ -0.57
C2CD3-209ENST00000535954 VAMP4O75379 141 aa11.47□□□□□ -0.57
C2CD3-209ENST00000535954 IARSP41252 1262 aaKnown RBP11.47□□□□□ -0.57
C2CD3-209ENST00000535954 SF3B3Q15393 1217 aaKnown RBP11.47□□□□□ -0.57
C2CD3-209ENST00000535954 CC2D2BQ6DHV5 1058 aa11.47□□□□□ -0.57
C2CD3-209ENST00000535954 RPGRQ92834 1020 aaKnown RBP11.47□□□□□ -0.57
C2CD3-209ENST00000535954 ATP6V0A2Q9Y487 856 aa11.47□□□□□ -0.57
C2CD3-209ENST00000535954 CACNA1FO60840 1977 aa11.47□□□□□ -0.57
C2CD3-209ENST00000535954 ZNF521Q96K83 1311 aa11.46□□□□□ -0.57
C2CD3-209ENST00000535954 ZNF541Q9H0D2 1346 aa11.46□□□□□ -0.57
C2CD3-209ENST00000535954 PPEF1O14829 653 aaPredicted RBP11.46□□□□□ -0.57
C2CD3-209ENST00000535954 BBOX1O75936 387 aa11.46□□□□□ -0.57
C2CD3-209ENST00000535954 FSTL1Q12841 308 aa11.46□□□□□ -0.57
C2CD3-209ENST00000535954 CCDC30Q5VVM6 783 aa11.46□□□□□ -0.57
C2CD3-209ENST00000535954 DPY19L2Q6NUT2 758 aa11.46□□□□□ -0.57
C2CD3-209ENST00000535954 SP8Q8IXZ3 490 aa11.46□□□□□ -0.57
C2CD3-209ENST00000535954 L3MBTL3Q96JM7 780 aaPredicted RBP11.46□□□□□ -0.57
C2CD3-209ENST00000535954 METTL22Q9BUU2 404 aaPredicted RBP11.46□□□□□ -0.57
C2CD3-209ENST00000535954 RTFDC1Q9BY42 306 aaPredicted RBP11.46□□□□□ -0.57
C2CD3-209ENST00000535954 SCN4AP35499 1836 aa11.46□□□□□ -0.58
C2CD3-209ENST00000535954 TCERG1O14776 1098 aaKnown RBP11.45□□□□□ -0.58
C2CD3-209ENST00000535954 IGKV5-2P06315 115 aa11.45□□□□□ -0.58
C2CD3-209ENST00000535954 POTEIP0CG38 1075 aa11.45□□□□□ -0.58
C2CD3-209ENST00000535954 POTEJP0CG39 1038 aa11.45□□□□□ -0.58
C2CD3-209ENST00000535954 TWISTNBQ3B726 338 aaPredicted RBP11.45□□□□□ -0.58
C2CD3-209ENST00000535954 RIC3Q7Z5B4 369 aa11.45□□□□□ -0.58
C2CD3-209ENST00000535954 SALL2Q9Y467 1007 aaPredicted RBP11.45□□□□□ -0.58
C2CD3-209ENST00000535954 LRRC37AA6NMS7 1700 aa11.44□□□□□ -0.58
C2CD3-209ENST00000535954 FANCIQ9NVI1 1328 aa11.44□□□□□ -0.58
C2CD3-209ENST00000535954 PI4KAP2A4QPH2 592 aa11.44□□□□□ -0.58
C2CD3-209ENST00000535954 HTRA3P83110 453 aa11.44□□□□□ -0.58
C2CD3-209ENST00000535954 GRAPQ13588 217 aa11.44□□□□□ -0.58
C2CD3-209ENST00000535954 GRIPAP1Q4V328 841 aa11.44□□□□□ -0.58
C2CD3-209ENST00000535954 KSR2Q6VAB6 950 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms