RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 LARGE2Q8N3Y3 721 aa10.69□□□□□ -0.7
CHFR-211ENST00000535897 PSMD1Q99460 953 aa10.69□□□□□ -0.7
CHFR-211ENST00000535897 BEGAINQ9BUH8 593 aa10.69□□□□□ -0.7
CHFR-211ENST00000535897 MIS18AQ9NYP9 233 aa10.69□□□□□ -0.7
CHFR-211ENST00000535897 NEFMP07197 916 aa10.68□□□□□ -0.7
CHFR-211ENST00000535897 GPTP24298 496 aa10.68□□□□□ -0.7
CHFR-211ENST00000535897 TAF7Q15545 349 aaPredicted RBP10.68□□□□□ -0.7
CHFR-211ENST00000535897 CC2D2BQ6DHV5 1058 aa10.68□□□□□ -0.7
CHFR-211ENST00000535897 TMX4Q9H1E5 349 aaPredicted RBP10.68□□□□□ -0.7
CHFR-211ENST00000535897 DDX21Q9NR30 783 aaKnown RBP eCLIP10.68□□□□□ -0.7
CHFR-211ENST00000535897 RRP7AQ9Y3A4 280 aaKnown RBP10.68□□□□□ -0.7
CHFR-211ENST00000535897 NUP98P52948 1817 aa10.68□□□□□ -0.7
CHFR-211ENST00000535897 HTATSF1O43719 755 aaKnown RBP10.67□□□□□ -0.7
CHFR-211ENST00000535897 HSPA8P11142 646 aaKnown RBP10.67□□□□□ -0.7
CHFR-211ENST00000535897 MYL6BP14649 208 aa10.67□□□□□ -0.7
CHFR-211ENST00000535897 CRY2Q49AN0 593 aa10.67□□□□□ -0.7
CHFR-211ENST00000535897 ABHD8Q96I13 439 aa10.67□□□□□ -0.7
CHFR-211ENST00000535897 ZBTB3Q9H5J0 574 aa10.67□□□□□ -0.7
CHFR-211ENST00000535897 MAP3K15Q6ZN16 1313 aa10.66□□□□□ -0.7
CHFR-211ENST00000535897 PPEF1O14829 653 aaPredicted RBP10.66□□□□□ -0.7
CHFR-211ENST00000535897 PPP2R1AP30153 589 aa10.66□□□□□ -0.7
CHFR-211ENST00000535897 EPS15P42566 896 aa10.66□□□□□ -0.7
CHFR-211ENST00000535897 ECE1P42892 770 aa10.66□□□□□ -0.7
CHFR-211ENST00000535897 NIM1KQ8IY84 436 aa10.66□□□□□ -0.7
CHFR-211ENST00000535897 COL4A5P29400 1685 aa10.66□□□□□ -0.7
CHFR-211ENST00000535897 KDM3BQ7LBC6 1761 aa10.65□□□□□ -0.7
CHFR-211ENST00000535897 LTBP1Q14766 1721 aa10.65□□□□□ -0.7
CHFR-211ENST00000535897 ERVV-1B6SEH8 477 aa10.65□□□□□ -0.7
CHFR-211ENST00000535897 TRAF5O00463 557 aa10.65□□□□□ -0.7
CHFR-211ENST00000535897 PPIP5K2O43314 1243 aa10.65□□□□□ -0.7
CHFR-211ENST00000535897 SCNN1DP51172 638 aa10.65□□□□□ -0.7
CHFR-211ENST00000535897 FMR1Q06787 632 aaKnown RBP eCLIP10.65□□□□□ -0.7
CHFR-211ENST00000535897 GRIPAP1Q4V328 841 aa10.65□□□□□ -0.7
CHFR-211ENST00000535897 CYP4F22Q6NT55 531 aa10.65□□□□□ -0.7
CHFR-211ENST00000535897 TTLL7Q6ZT98 887 aa10.65□□□□□ -0.7
CHFR-211ENST00000535897 PNISRQ8TF01 805 aaKnown RBP10.65□□□□□ -0.7
CHFR-211ENST00000535897 RBM17Q96I25 401 aaKnown RBP10.65□□□□□ -0.7
CHFR-211ENST00000535897 CAPNS2Q96L46 248 aa10.65□□□□□ -0.7
CHFR-211ENST00000535897 SNED1Q8TER0 1413 aa10.65□□□□□ -0.7
CHFR-211ENST00000535897 UBN2Q6ZU65 1347 aa10.64□□□□□ -0.71
CHFR-211ENST00000535897 CCDC85CA6NKD9 419 aa10.64□□□□□ -0.71
CHFR-211ENST00000535897 HOXA10P31260 410 aaPredicted RBP10.64□□□□□ -0.71
CHFR-211ENST00000535897 FAM161AQ3B820 660 aa10.64□□□□□ -0.71
CHFR-211ENST00000535897 USP50Q70EL3 339 aaPredicted RBP10.64□□□□□ -0.71
CHFR-211ENST00000535897 GPR101Q96P66 508 aaPredicted RBP10.64□□□□□ -0.71
CHFR-211ENST00000535897 DLG5Q8TDM6 1919 aa10.64□□□□□ -0.71
CHFR-211ENST00000535897 IBTKQ9P2D0 1353 aaPredicted RBP10.64□□□□□ -0.71
CHFR-211ENST00000535897 TRPM7Q96QT4 1865 aa10.64□□□□□ -0.71
CHFR-211ENST00000535897 THSD7BQ9C0I4 1608 aa10.63□□□□□ -0.71
CHFR-211ENST00000535897 AOC3Q16853 763 aa10.63□□□□□ -0.71
CHFR-211ENST00000535897 SUSD4Q5VX71 490 aa10.63□□□□□ -0.71
CHFR-211ENST00000535897 SLC51AQ86UW1 340 aa10.63□□□□□ -0.71
CHFR-211ENST00000535897 CFAP44Q96MT7 982 aa10.63□□□□□ -0.71
CHFR-211ENST00000535897 CRAMP1Q96RY5 1269 aa10.63□□□□□ -0.71
CHFR-211ENST00000535897 RIC1Q4ADV7 1423 aa10.63□□□□□ -0.71
CHFR-211ENST00000535897 PPP1R42Q7Z4L9 355 aa10.62□□□□□ -0.71
CHFR-211ENST00000535897 NLRP3Q96P20 1036 aa10.62□□□□□ -0.71
CHFR-211ENST00000535897 THUMPD2Q9BTF0 503 aaKnown RBP10.62□□□□□ -0.71
CHFR-211ENST00000535897 ZNF408Q9H9D4 720 aa10.62□□□□□ -0.71
CHFR-211ENST00000535897 ADARB2Q9NS39 739 aaKnown RBP10.62□□□□□ -0.71
CHFR-211ENST00000535897 TSKSQ9UJT2 592 aa10.62□□□□□ -0.71
CHFR-211ENST00000535897 MAPK8IP3Q9UPT6 1336 aa10.61□□□□□ -0.71
CHFR-211ENST00000535897 AOC2O75106 756 aa10.61□□□□□ -0.71
CHFR-211ENST00000535897 CELF2O95319 508 aaKnown RBP10.61□□□□□ -0.71
CHFR-211ENST00000535897 NTSR2O95665 410 aa10.61□□□□□ -0.71
CHFR-211ENST00000535897 EIF4A1P60842 406 aaKnown RBP10.61□□□□□ -0.71
CHFR-211ENST00000535897 CST9Q5W186 159 aa10.61□□□□□ -0.71
CHFR-211ENST00000535897 C3orf67Q6ZVT6 689 aa10.61□□□□□ -0.71
CHFR-211ENST00000535897 ZNF34Q8IZ26 560 aa10.61□□□□□ -0.71
CHFR-211ENST00000535897 SUPT20HQ8NEM7 779 aa10.61□□□□□ -0.71
CHFR-211ENST00000535897 BCL2L13Q9BXK5 485 aa10.61□□□□□ -0.71
CHFR-211ENST00000535897 GPRC5DQ9NZD1 345 aa10.61□□□□□ -0.71
CHFR-211ENST00000535897 ZNRF3Q9ULT6 936 aa10.61□□□□□ -0.71
CHFR-211ENST00000535897 TLL2Q9Y6L7 1015 aa10.61□□□□□ -0.71
CHFR-211ENST00000535897 EIF2S2P20042 333 aaKnown RBP10.6□□□□□ -0.71
CHFR-211ENST00000535897 MAP2K2P36507 400 aa10.6□□□□□ -0.71
CHFR-211ENST00000535897 GMPSP49915 693 aaPredicted RBP10.6□□□□□ -0.71
CHFR-211ENST00000535897 MLLT1Q03111 559 aaPredicted RBP10.6□□□□□ -0.71
CHFR-211ENST00000535897 PARP10Q53GL7 1025 aa10.6□□□□□ -0.71
CHFR-211ENST00000535897 DPP8Q6V1X1 898 aaPredicted RBP10.6□□□□□ -0.71
CHFR-211ENST00000535897 GIGYF2Q6Y7W6 1299 aaKnown RBP10.6□□□□□ -0.71
CHFR-211ENST00000535897 UTP14AQ9BVJ6 771 aaKnown RBP10.6□□□□□ -0.71
CHFR-211ENST00000535897 ATP6V0A2Q9Y487 856 aa10.6□□□□□ -0.71
CHFR-211ENST00000535897 ABCC4O15439 1325 aa10.59□□□□□ -0.71
CHFR-211ENST00000535897 CXCL9Q07325 125 aa10.59□□□□□ -0.71
CHFR-211ENST00000535897 NFE2L2Q16236 605 aa10.59□□□□□ -0.71
CHFR-211ENST00000535897 SAPCD2Q86UD0 394 aa10.59□□□□□ -0.71
CHFR-211ENST00000535897 GLIS2Q9BZE0 524 aaPredicted RBP10.59□□□□□ -0.71
CHFR-211ENST00000535897 TSPYL4Q9UJ04 414 aa10.59□□□□□ -0.71
CHFR-211ENST00000535897 ERBB4Q15303 1308 aa10.58□□□□□ -0.71
CHFR-211ENST00000535897 CA12O43570 354 aa10.58□□□□□ -0.72
CHFR-211ENST00000535897 RAD17O75943 681 aa10.58□□□□□ -0.72
CHFR-211ENST00000535897 TNIP1Q15025 636 aa10.58□□□□□ -0.72
CHFR-211ENST00000535897 CIAPIN1Q6FI81 312 aa10.58□□□□□ -0.72
CHFR-211ENST00000535897 MPNDQ8N594 471 aa10.58□□□□□ -0.72
CHFR-211ENST00000535897 VPS33BQ9H267 617 aa10.58□□□□□ -0.72
CHFR-211ENST00000535897 PNNQ9H307 717 aaKnown RBP10.58□□□□□ -0.72
CHFR-211ENST00000535897 CDHR2Q9BYE9 1310 aa10.58□□□□□ -0.72
CHFR-211ENST00000535897 LAMB2P55268 1798 aa10.57□□□□□ -0.72
CHFR-211ENST00000535897 ANKRD36CQ5JPF3 1778 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms