RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 RIC3Q7Z5B4 369 aa8.16□□□□□ -1.1
CDCA3-205ENST00000535871 CCDC191Q8NCU4 936 aa8.16□□□□□ -1.1
CDCA3-205ENST00000535871 XAGE3Q8WTP9 111 aa8.16□□□□□ -1.1
CDCA3-205ENST00000535871 CCDC136Q96JN2 1154 aa8.16□□□□□ -1.1
CDCA3-205ENST00000535871 RWDD1Q9H446 243 aaPredicted RBP8.16□□□□□ -1.1
CDCA3-205ENST00000535871 PCDHB8Q9UN66 801 aa8.16□□□□□ -1.1
CDCA3-205ENST00000535871 MAP3K2Q9Y2U5 619 aa8.16□□□□□ -1.1
CDCA3-205ENST00000535871 PCDHB13Q9Y5F0 798 aa8.16□□□□□ -1.1
CDCA3-205ENST00000535871 TAF1LQ8IZX4 1826 aa8.15□□□□□ -1.1
CDCA3-205ENST00000535871 EP400Q96L91 3159 aa8.15□□□□□ -1.1
CDCA3-205ENST00000535871 GNAI2P04899 355 aa8.15□□□□□ -1.1
CDCA3-205ENST00000535871 PSEN1P49768 467 aa8.15□□□□□ -1.1
CDCA3-205ENST00000535871 MTX1Q13505 466 aa8.15□□□□□ -1.1
CDCA3-205ENST00000535871 SMYD5Q6GMV2 418 aa8.15□□□□□ -1.1
CDCA3-205ENST00000535871 FLAD1Q8NFF5 587 aa8.15□□□□□ -1.1
CDCA3-205ENST00000535871 AK7Q96M32 723 aa8.15□□□□□ -1.1
CDCA3-205ENST00000535871 CCNL1Q9UK58 526 aaPredicted RBP8.15□□□□□ -1.1
CDCA3-205ENST00000535871 ZNF652Q9Y2D9 606 aa8.15□□□□□ -1.1
CDCA3-205ENST00000535871 MYH14Q7Z406 1995 aaKnown RBP8.15□□□□□ -1.11
CDCA3-205ENST00000535871 NUP188Q5SRE5 1749 aa8.15□□□□□ -1.11
CDCA3-205ENST00000535871 GRM8O00222 908 aa8.14□□□□□ -1.11
CDCA3-205ENST00000535871 TCERG1O14776 1098 aaKnown RBP8.14□□□□□ -1.11
CDCA3-205ENST00000535871 HMMRO75330 724 aa8.14□□□□□ -1.11
CDCA3-205ENST00000535871 MYL6BP14649 208 aa8.14□□□□□ -1.11
CDCA3-205ENST00000535871 SSFA2P28290 1259 aa8.14□□□□□ -1.11
CDCA3-205ENST00000535871 CACNB1Q02641 598 aaPredicted RBP8.14□□□□□ -1.11
CDCA3-205ENST00000535871 TCIRG1Q13488 830 aa8.14□□□□□ -1.11
CDCA3-205ENST00000535871 ITPK1Q13572 414 aa8.14□□□□□ -1.11
CDCA3-205ENST00000535871 GCKRQ14397 625 aa8.14□□□□□ -1.11
CDCA3-205ENST00000535871 PARP10Q53GL7 1025 aa8.14□□□□□ -1.11
CDCA3-205ENST00000535871 NECTIN2Q92692 538 aa8.14□□□□□ -1.11
CDCA3-205ENST00000535871 ISCA1Q9BUE6 129 aa8.14□□□□□ -1.11
CDCA3-205ENST00000535871 USP44Q9H0E7 712 aa8.14□□□□□ -1.11
CDCA3-205ENST00000535871 ZBTB1Q9Y2K1 713 aa8.14□□□□□ -1.11
CDCA3-205ENST00000535871 ARFGEF2Q9Y6D5 1785 aa8.14□□□□□ -1.11
CDCA3-205ENST00000535871 KDM2BQ8NHM5 1336 aa8.13□□□□□ -1.11
CDCA3-205ENST00000535871 NEURL1BA8MQ27 555 aa8.13□□□□□ -1.11
CDCA3-205ENST00000535871 F6X3S4 739 aa8.13□□□□□ -1.11
CDCA3-205ENST00000535871 TRIM37O94972 964 aa8.13□□□□□ -1.11
CDCA3-205ENST00000535871 IGKV5-2P06315 115 aa8.13□□□□□ -1.11
CDCA3-205ENST00000535871 UBTFL1P0CB47 393 aaPredicted RBP8.13□□□□□ -1.11
CDCA3-205ENST00000535871 SLC4A10Q6U841 1118 aa8.13□□□□□ -1.11
CDCA3-205ENST00000535871 ILDR1Q86SU0 546 aaPredicted RBP8.13□□□□□ -1.11
CDCA3-205ENST00000535871 PELP1Q8IZL8 1130 aaKnown RBP8.13□□□□□ -1.11
CDCA3-205ENST00000535871 ANKRD44Q8N8A2 993 aa8.13□□□□□ -1.11
CDCA3-205ENST00000535871 GCC1Q96CN9 775 aa8.13□□□□□ -1.11
CDCA3-205ENST00000535871 RTCBQ9Y3I0 505 aaKnown RBP8.13□□□□□ -1.11
CDCA3-205ENST00000535871 C4BP0C0L5 1744 aa8.12□□□□□ -1.11
CDCA3-205ENST00000535871 TNS1Q9HBL0 1735 aaKnown RBP8.12□□□□□ -1.11
CDCA3-205ENST00000535871 PPP1R37O75864 691 aa8.12□□□□□ -1.11
CDCA3-205ENST00000535871 ANXA1P04083 346 aa8.12□□□□□ -1.11
CDCA3-205ENST00000535871 IRX6P78412 446 aaPredicted RBP8.12□□□□□ -1.11
CDCA3-205ENST00000535871 TXNRD1Q16881 649 aa8.12□□□□□ -1.11
CDCA3-205ENST00000535871 DZIP3Q86Y13 1208 aaKnown RBP8.12□□□□□ -1.11
CDCA3-205ENST00000535871 SMC5Q8IY18 1101 aa8.12□□□□□ -1.11
CDCA3-205ENST00000535871 LINC00116Q8NCU8 138 aa8.12□□□□□ -1.11
CDCA3-205ENST00000535871 PLA2G12BQ9BX93 195 aa8.12□□□□□ -1.11
CDCA3-205ENST00000535871 CWC25Q9NXE8 425 aaPredicted RBP8.12□□□□□ -1.11
CDCA3-205ENST00000535871 NARFQ9UHQ1 456 aa8.12□□□□□ -1.11
CDCA3-205ENST00000535871 CDHR2Q9BYE9 1310 aa8.11□□□□□ -1.11
CDCA3-205ENST00000535871 H7C1W4 665 aa8.11□□□□□ -1.11
CDCA3-205ENST00000535871 ZMYND10O75800 440 aa8.11□□□□□ -1.11
CDCA3-205ENST00000535871 CAMTA2O94983 1202 aa8.11□□□□□ -1.11
CDCA3-205ENST00000535871 PCCAP05165 728 aaPredicted RBP8.11□□□□□ -1.11
CDCA3-205ENST00000535871 ATP8B2P98198 1209 aa8.11□□□□□ -1.11
CDCA3-205ENST00000535871 AIMP1Q12904 312 aaKnown RBP8.11□□□□□ -1.11
CDCA3-205ENST00000535871 RABL6Q3YEC7 729 aaPredicted RBP8.11□□□□□ -1.11
CDCA3-205ENST00000535871 HSP90AB4PQ58FF6 505 aa8.11□□□□□ -1.11
CDCA3-205ENST00000535871 TTLL7Q6ZT98 887 aa8.11□□□□□ -1.11
CDCA3-205ENST00000535871 ZNF34Q8IZ26 560 aa8.11□□□□□ -1.11
CDCA3-205ENST00000535871 ZBTB38Q8NAP3 1195 aaPredicted RBP8.11□□□□□ -1.11
CDCA3-205ENST00000535871 MEIS3Q99687 375 aa8.11□□□□□ -1.11
CDCA3-205ENST00000535871 C9orf78Q9NZ63 289 aaPredicted RBP8.11□□□□□ -1.11
CDCA3-205ENST00000535871 TNNQ9UQP3 1299 aa8.11□□□□□ -1.11
CDCA3-205ENST00000535871 PCDHB15Q9Y5E8 787 aa8.11□□□□□ -1.11
CDCA3-205ENST00000535871 ANKRD36CQ5JPF3 1778 aa8.11□□□□□ -1.11
CDCA3-205ENST00000535871 BCORQ6W2J9 1755 aa8.11□□□□□ -1.11
CDCA3-205ENST00000535871 RIC1Q4ADV7 1423 aa8.11□□□□□ -1.11
CDCA3-205ENST00000535871 NUP98P52948 1817 aa8.1□□□□□ -1.11
CDCA3-205ENST00000535871 APBA3O96018 575 aa8.1□□□□□ -1.11
CDCA3-205ENST00000535871 CASP7P55210 303 aa8.1□□□□□ -1.11
CDCA3-205ENST00000535871 SF3B2Q13435 895 aaKnown RBP8.1□□□□□ -1.11
CDCA3-205ENST00000535871 TRAPPC3LQ5T215 181 aa8.1□□□□□ -1.11
CDCA3-205ENST00000535871 CEP85Q6P2H3 762 aa8.1□□□□□ -1.11
CDCA3-205ENST00000535871 PTF1AQ7RTS3 328 aa8.1□□□□□ -1.11
CDCA3-205ENST00000535871 POTEDQ86YR6 584 aa8.1□□□□□ -1.11
CDCA3-205ENST00000535871 SSH3Q8TE77 659 aa8.1□□□□□ -1.11
CDCA3-205ENST00000535871 MYD88Q99836 296 aa8.1□□□□□ -1.11
CDCA3-205ENST00000535871 DCTPP1Q9H773 170 aa8.1□□□□□ -1.11
CDCA3-205ENST00000535871 LRRC4BQ9NT99 713 aa8.1□□□□□ -1.11
CDCA3-205ENST00000535871 SCN7AQ01118 1682 aa8.1□□□□□ -1.11
CDCA3-205ENST00000535871 UBR3Q6ZT12 1888 aa8.1□□□□□ -1.11
CDCA3-205ENST00000535871 QSER1Q2KHR3 1735 aa8.09□□□□□ -1.11
CDCA3-205ENST00000535871 USP42Q9H9J4 1324 aaKnown RBP8.09□□□□□ -1.11
CDCA3-205ENST00000535871 ZPR1O75312 459 aa8.09□□□□□ -1.11
CDCA3-205ENST00000535871 BAG6P46379 1132 aa8.09□□□□□ -1.11
CDCA3-205ENST00000535871 FAM182BQ5T319 152 aa8.09□□□□□ -1.11
CDCA3-205ENST00000535871 PPP1R42Q7Z4L9 355 aa8.09□□□□□ -1.11
CDCA3-205ENST00000535871 NLRP10Q86W26 655 aa8.09□□□□□ -1.11
CDCA3-205ENST00000535871 ZNF579Q8NAF0 562 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms