RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 HOXB7P09629 217 aa14.12□□□□□ -0.15
CCDC60-202ENST00000535685 NPR1P16066 1061 aa14.12□□□□□ -0.15
CCDC60-202ENST00000535685 MNX1P50219 401 aaPredicted RBP14.12□□□□□ -0.15
CCDC60-202ENST00000535685 PRELPP51888 382 aa14.12□□□□□ -0.15
CCDC60-202ENST00000535685 GIGYF2Q6Y7W6 1299 aaKnown RBP14.12□□□□□ -0.15
CCDC60-202ENST00000535685 KIF6Q6ZMV9 814 aa14.12□□□□□ -0.15
CCDC60-202ENST00000535685 CCDC24Q8N4L8 307 aa14.12□□□□□ -0.15
CCDC60-202ENST00000535685 C7orf43Q8WVR3 580 aa14.12□□□□□ -0.15
CCDC60-202ENST00000535685 TIAM2Q8IVF5 1701 aa14.12□□□□□ -0.15
CCDC60-202ENST00000535685 RASSF7Q02833 373 aa14.11□□□□□ -0.15
CCDC60-202ENST00000535685 PRPF40BQ6NWY9 871 aaKnown RBP14.11□□□□□ -0.15
CCDC60-202ENST00000535685 ZNF34Q8IZ26 560 aa14.11□□□□□ -0.15
CCDC60-202ENST00000535685 SPRYD3Q8NCJ5 442 aa14.11□□□□□ -0.15
CCDC60-202ENST00000535685 FAM212AQ96EL1 285 aa14.11□□□□□ -0.15
CCDC60-202ENST00000535685 ANKRD36CQ5JPF3 1778 aa14.11□□□□□ -0.15
CCDC60-202ENST00000535685 C21orf2O43822 256 aa14.1□□□□□ -0.15
CCDC60-202ENST00000535685 MYL6BP14649 208 aa14.1□□□□□ -0.15
CCDC60-202ENST00000535685 HSPA6P17066 643 aa14.1□□□□□ -0.15
CCDC60-202ENST00000535685 NEUROD2Q15784 382 aa14.1□□□□□ -0.15
CCDC60-202ENST00000535685 CRY2Q49AN0 593 aa14.1□□□□□ -0.15
CCDC60-202ENST00000535685 NMRK2Q9NPI5 230 aa14.1□□□□□ -0.15
CCDC60-202ENST00000535685 GLTPD2A6NH11 291 aa14.09□□□□□ -0.15
CCDC60-202ENST00000535685 PITPNM1O00562 1244 aa14.09□□□□□ -0.15
CCDC60-202ENST00000535685 ZNF853P0CG23 659 aa14.09□□□□□ -0.15
CCDC60-202ENST00000535685 PARP10Q53GL7 1025 aa14.09□□□□□ -0.15
CCDC60-202ENST00000535685 NGEFQ8N5V2 710 aa14.09□□□□□ -0.15
CCDC60-202ENST00000535685 RBM46Q8TBY0 533 aaKnown RBP14.09□□□□□ -0.15
CCDC60-202ENST00000535685 RNF25Q96BH1 459 aaPredicted RBP14.09□□□□□ -0.15
CCDC60-202ENST00000535685 DDX21Q9NR30 783 aaKnown RBP eCLIP14.09□□□□□ -0.15
CCDC60-202ENST00000535685 UBN2Q6ZU65 1347 aa14.09□□□□□ -0.15
CCDC60-202ENST00000535685 EIF2S2P20042 333 aaKnown RBP14.08□□□□□ -0.16
CCDC60-202ENST00000535685 ALDH1B1P30837 517 aa14.08□□□□□ -0.16
CCDC60-202ENST00000535685 TAOK3Q9H2K8 898 aa14.08□□□□□ -0.16
CCDC60-202ENST00000535685 RNF123Q5XPI4 1314 aa14.08□□□□□ -0.16
CCDC60-202ENST00000535685 WDR90Q96KV7 1748 aa14.07□□□□□ -0.16
CCDC60-202ENST00000535685 NTSR2O95665 410 aa14.07□□□□□ -0.16
CCDC60-202ENST00000535685 GTF2E1P29083 439 aaPredicted RBP14.07□□□□□ -0.16
CCDC60-202ENST00000535685 HOXA10P31260 410 aaPredicted RBP14.07□□□□□ -0.16
CCDC60-202ENST00000535685 CALD1Q05682 793 aaKnown RBP14.07□□□□□ -0.16
CCDC60-202ENST00000535685 PROSER3Q2NL68 480 aa14.07□□□□□ -0.16
CCDC60-202ENST00000535685 HSP90AB3PQ58FF7 597 aa14.07□□□□□ -0.16
CCDC60-202ENST00000535685 SUSD4Q5VX71 490 aa14.07□□□□□ -0.16
CCDC60-202ENST00000535685 HS6ST3Q8IZP7 471 aa14.07□□□□□ -0.16
CCDC60-202ENST00000535685 ZBTB3Q9H5J0 574 aa14.07□□□□□ -0.16
CCDC60-202ENST00000535685 ABCC12Q96J65 1359 aa14.07□□□□□ -0.16
CCDC60-202ENST00000535685 APAF1O14727 1248 aa14.06□□□□□ -0.16
CCDC60-202ENST00000535685 CCDC93Q567U6 631 aa14.06□□□□□ -0.16
CCDC60-202ENST00000535685 SLC10A5Q5PT55 438 aa14.06□□□□□ -0.16
CCDC60-202ENST00000535685 PPP1R42Q7Z4L9 355 aa14.06□□□□□ -0.16
CCDC60-202ENST00000535685 IFT57Q9NWB7 429 aa14.06□□□□□ -0.16
CCDC60-202ENST00000535685 SNED1Q8TER0 1413 aa14.06□□□□□ -0.16
CCDC60-202ENST00000535685 FAM177BA6PVY3 158 aa14.05□□□□□ -0.16
CCDC60-202ENST00000535685 GPTP24298 496 aa14.05□□□□□ -0.16
CCDC60-202ENST00000535685 FSTL1Q12841 308 aa14.05□□□□□ -0.16
CCDC60-202ENST00000535685 ERFEQ4G0M1 354 aa14.05□□□□□ -0.16
CCDC60-202ENST00000535685 CC2D2BQ6DHV5 1058 aa14.05□□□□□ -0.16
CCDC60-202ENST00000535685 COPS6Q7L5N1 327 aa14.05□□□□□ -0.16
CCDC60-202ENST00000535685 NUTM1Q86Y26 1132 aa14.05□□□□□ -0.16
CCDC60-202ENST00000535685 RTKN2Q8IZC4 609 aa14.05□□□□□ -0.16
CCDC60-202ENST00000535685 RRAGCQ9HB90 399 aa14.05□□□□□ -0.16
CCDC60-202ENST00000535685 CACNA1FO60840 1977 aa14.04□□□□□ -0.16
CCDC60-202ENST00000535685 ZNF316A6NFI3 1004 aaPredicted RBP14.04□□□□□ -0.16
CCDC60-202ENST00000535685 ANXA1P04083 346 aa14.04□□□□□ -0.16
CCDC60-202ENST00000535685 VEGFAP15692 232 aaPredicted RBP14.04□□□□□ -0.16
CCDC60-202ENST00000535685 GNAI1P63096 354 aa14.04□□□□□ -0.16
CCDC60-202ENST00000535685 FKBP4Q02790 459 aaKnown RBP eCLIP14.04□□□□□ -0.16
CCDC60-202ENST00000535685 TCIRG1Q13488 830 aa14.04□□□□□ -0.16
CCDC60-202ENST00000535685 KRT24Q2M2I5 525 aa14.04□□□□□ -0.16
CCDC60-202ENST00000535685 GRIPAP1Q4V328 841 aa14.04□□□□□ -0.16
CCDC60-202ENST00000535685 DPY19L2Q6NUT2 758 aa14.04□□□□□ -0.16
CCDC60-202ENST00000535685 XAGE3Q8WTP9 111 aa14.04□□□□□ -0.16
CCDC60-202ENST00000535685 CRAMP1Q96RY5 1269 aa14.04□□□□□ -0.16
CCDC60-202ENST00000535685 MBIPQ9NS73 344 aa14.04□□□□□ -0.16
CCDC60-202ENST00000535685 DBF4Q9UBU7 674 aaPredicted RBP14.04□□□□□ -0.16
CCDC60-202ENST00000535685 LAMB2P55268 1798 aa14.04□□□□□ -0.16
CCDC60-202ENST00000535685 SCN4AP35499 1836 aa14.04□□□□□ -0.16
CCDC60-202ENST00000535685 RIOK3O14730 519 aaKnown RBP14.03□□□□□ -0.16
CCDC60-202ENST00000535685 APLP1P51693 650 aa14.03□□□□□ -0.16
CCDC60-202ENST00000535685 CCDC27Q2M243 656 aa14.03□□□□□ -0.16
CCDC60-202ENST00000535685 HDGFL1Q5TGJ6 251 aa14.03□□□□□ -0.16
CCDC60-202ENST00000535685 DUSP27Q5VZP5 1158 aa14.03□□□□□ -0.16
CCDC60-202ENST00000535685 C16orf71Q8IYS4 520 aaPredicted RBP14.03□□□□□ -0.16
CCDC60-202ENST00000535685 UTP14AQ9BVJ6 771 aaKnown RBP14.03□□□□□ -0.16
CCDC60-202ENST00000535685 LAS1LQ9Y4W2 734 aaKnown RBP14.03□□□□□ -0.16
CCDC60-202ENST00000535685 NLRP10Q86W26 655 aa14.02□□□□□ -0.17
CCDC60-202ENST00000535685 RASEFQ8IZ41 740 aa14.02□□□□□ -0.17
CCDC60-202ENST00000535685 PLBD2Q8NHP8 589 aa14.02□□□□□ -0.17
CCDC60-202ENST00000535685 PSMD1Q99460 953 aa14.02□□□□□ -0.17
CCDC60-202ENST00000535685 CHMP4AQ9BY43 222 aa14.02□□□□□ -0.17
CCDC60-202ENST00000535685 HYPKQ9NX55 129 aa14.02□□□□□ -0.17
CCDC60-202ENST00000535685 CHPF2Q9P2E5 772 aa14.02□□□□□ -0.17
CCDC60-202ENST00000535685 TAOK2Q9UL54 1235 aa14.02□□□□□ -0.17
CCDC60-202ENST00000535685 POTECB2RU33 542 aa14.01□□□□□ -0.17
CCDC60-202ENST00000535685 TRIM28Q13263 835 aaKnown RBP14.01□□□□□ -0.17
CCDC60-202ENST00000535685 CCDC184Q52MB2 194 aa14.01□□□□□ -0.17
CCDC60-202ENST00000535685 NECTIN2Q92692 538 aa14.01□□□□□ -0.17
CCDC60-202ENST00000535685 RPGRQ92834 1020 aaKnown RBP14.01□□□□□ -0.17
CCDC60-202ENST00000535685 RBM17Q96I25 401 aaKnown RBP14.01□□□□□ -0.17
CCDC60-202ENST00000535685 NLRP3Q96P20 1036 aa14.01□□□□□ -0.17
CCDC60-202ENST00000535685 AIMP1Q12904 312 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms