RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 TBC1D9Q6ZT07 1266 aa14.57□□□□□ -0.08
SPG11-203ENST00000535302 TNPO1Q92973 898 aaKnown RBP14.57□□□□□ -0.08
SPG11-203ENST00000535302 SLC26A6Q9BXS9 759 aa14.57□□□□□ -0.08
SPG11-203ENST00000535302 PTPN14Q15678 1187 aa14.57□□□□□ -0.08
SPG11-203ENST00000535302 CATIPQ7Z7H3 387 aa14.57□□□□□ -0.08
SPG11-203ENST00000535302 FEZ1Q99689 392 aa14.57□□□□□ -0.08
SPG11-203ENST00000535302 HOMER2Q9NSB8 354 aa14.57□□□□□ -0.08
SPG11-203ENST00000535302 FAM135AQ9P2D6 1515 aa14.56□□□□□ -0.08
SPG11-203ENST00000535302 TOP1P11387 765 aaKnown RBP14.56□□□□□ -0.08
SPG11-203ENST00000535302 TSPY2A6NKD2 308 aa14.56□□□□□ -0.08
SPG11-203ENST00000535302 TMEM110-MUSTN1A8MSY1 372 aa14.56□□□□□ -0.08
SPG11-203ENST00000535302 CCDC183Q5T5S1 534 aa14.56□□□□□ -0.08
SPG11-203ENST00000535302 TXLNBQ8N3L3 684 aa14.56□□□□□ -0.08
SPG11-203ENST00000535302 USP16Q9Y5T5 823 aa14.56□□□□□ -0.08
SPG11-203ENST00000535302 CCDC141Q6ZP82 1450 aa14.56□□□□□ -0.08
SPG11-203ENST00000535302 DISP3Q9P2K9 1392 aa14.56□□□□□ -0.08
SPG11-203ENST00000535302 PPARDQ03181 441 aa14.56□□□□□ -0.08
SPG11-203ENST00000535302 TBC1D2Q9BYX2 928 aa14.56□□□□□ -0.08
SPG11-203ENST00000535302 ADGRL1O94910 1474 aa14.56□□□□□ -0.08
SPG11-203ENST00000535302 CWC25Q9NXE8 425 aaPredicted RBP14.56□□□□□ -0.08
SPG11-203ENST00000535302 KIF5CO60282 957 aa14.56□□□□□ -0.08
SPG11-203ENST00000535302 MAATS1Q7Z4T9 603 aa14.56□□□□□ -0.08
SPG11-203ENST00000535302 SYCP3Q8IZU3 236 aa14.56□□□□□ -0.08
SPG11-203ENST00000535302 CCDC150Q8NCX0 1101 aa14.56□□□□□ -0.08
SPG11-203ENST00000535302 CHPF2Q9P2E5 772 aa14.56□□□□□ -0.08
SPG11-203ENST00000535302 IDEP14735 1019 aa14.56□□□□□ -0.08
SPG11-203ENST00000535302 SFPQP23246 707 aaKnown RBP eCLIP14.56□□□□□ -0.08
SPG11-203ENST00000535302 GTF2F1P35269 517 aaKnown RBP eCLIP14.56□□□□□ -0.08
SPG11-203ENST00000535302 ACEP12821 1306 aa14.55□□□□□ -0.08
SPG11-203ENST00000535302 RFC4P35249 363 aa14.55□□□□□ -0.08
SPG11-203ENST00000535302 LIMCH1Q9UPQ0 1083 aa14.55□□□□□ -0.08
SPG11-203ENST00000535302 MAGI1Q96QZ7 1491 aaPredicted RBP14.55□□□□□ -0.08
SPG11-203ENST00000535302 ESPNB1AK53 854 aa14.55□□□□□ -0.08
SPG11-203ENST00000535302 CETN2P41208 172 aa14.55□□□□□ -0.08
SPG11-203ENST00000535302 PICALMQ13492 652 aa14.55□□□□□ -0.08
SPG11-203ENST00000535302 OTUD6BQ8N6M0 293 aa14.55□□□□□ -0.08
SPG11-203ENST00000535302 ANO10Q9NW15 660 aa14.55□□□□□ -0.08
SPG11-203ENST00000535302 ZHX1Q9UKY1 873 aaPredicted RBP14.55□□□□□ -0.08
SPG11-203ENST00000535302 CABLES1Q8TDN4 633 aa14.54□□□□□ -0.08
SPG11-203ENST00000535302 MTIF2P46199 727 aaKnown RBP14.54□□□□□ -0.08
SPG11-203ENST00000535302 TMEM266Q2M3C6 531 aa14.54□□□□□ -0.08
SPG11-203ENST00000535302 TMC6Q7Z403 805 aa14.54□□□□□ -0.08
SPG11-203ENST00000535302 BICD1Q96G01 975 aa14.54□□□□□ -0.08
SPG11-203ENST00000535302 ZRANB1Q9UGI0 708 aa14.54□□□□□ -0.08
SPG11-203ENST00000535302 JAG2Q9Y219 1238 aa14.54□□□□□ -0.08
SPG11-203ENST00000535302 FAM212AQ96EL1 285 aa14.54□□□□□ -0.08
SPG11-203ENST00000535302 KAT14Q9H8E8 782 aa14.54□□□□□ -0.08
SPG11-203ENST00000535302 TOP2BQ02880 1626 aa14.54□□□□□ -0.08
SPG11-203ENST00000535302 PTPN23Q9H3S7 1636 aa14.54□□□□□ -0.08
SPG11-203ENST00000535302 EVI5LQ96CN4 794 aa14.54□□□□□ -0.08
SPG11-203ENST00000535302 DNAJC5BQ9UF47 199 aa14.54□□□□□ -0.08
SPG11-203ENST00000535302 CIZ1Q9ULV3 898 aaPredicted RBP14.54□□□□□ -0.08
SPG11-203ENST00000535302 FAM170AA1A519 330 aa14.53□□□□□ -0.08
SPG11-203ENST00000535302 ABCC5O15440 1437 aa14.53□□□□□ -0.08
SPG11-203ENST00000535302 CCDC196A0A1B0GTZ2 297 aa14.53□□□□□ -0.08
SPG11-203ENST00000535302 IFNL2Q8IZJ0 200 aa14.53□□□□□ -0.08
SPG11-203ENST00000535302 METAP2P50579 478 aaKnown RBP eCLIP14.53□□□□□ -0.08
SPG11-203ENST00000535302 ZNF830Q96NB3 372 aaPredicted RBP14.53□□□□□ -0.08
SPG11-203ENST00000535302 MFSD6Q6ZSS7 791 aa14.52□□□□□ -0.08
SPG11-203ENST00000535302 CGNQ9P2M7 1197 aaKnown RBP14.52□□□□□ -0.08
SPG11-203ENST00000535302 PRXQ9BXM0 1461 aa14.52□□□□□ -0.08
SPG11-203ENST00000535302 ECHDC1Q9NTX5 307 aa14.52□□□□□ -0.09
SPG11-203ENST00000535302 SBNO2Q9Y2G9 1366 aa14.52□□□□□ -0.09
SPG11-203ENST00000535302 CCDC160A6NGH7 325 aa14.52□□□□□ -0.09
SPG11-203ENST00000535302 NBPF6Q5VWK0 638 aa14.52□□□□□ -0.09
SPG11-203ENST00000535302 NBPF5PQ86XG9 351 aaPredicted RBP14.52□□□□□ -0.09
SPG11-203ENST00000535302 NBPF4Q96M43 638 aa14.52□□□□□ -0.09
SPG11-203ENST00000535302 IARSP41252 1262 aaKnown RBP14.51□□□□□ -0.09
SPG11-203ENST00000535302 LRRC59Q96AG4 307 aaKnown RBP14.51□□□□□ -0.09
SPG11-203ENST00000535302 C16orf71Q8IYS4 520 aaPredicted RBP14.51□□□□□ -0.09
SPG11-203ENST00000535302 PPP1R14CQ8TAE6 165 aa14.51□□□□□ -0.09
SPG11-203ENST00000535302 JADE2Q9NQC1 790 aa14.51□□□□□ -0.09
SPG11-203ENST00000535302 SH2B1Q9NRF2 756 aaPredicted RBP14.51□□□□□ -0.09
SPG11-203ENST00000535302 ATP6V1AP38606 617 aa14.51□□□□□ -0.09
SPG11-203ENST00000535302 CCDC40Q4G0X9 1142 aa14.51□□□□□ -0.09
SPG11-203ENST00000535302 SMIM23A6NLE4 172 aa14.51□□□□□ -0.09
SPG11-203ENST00000535302 ORC3Q9UBD5 711 aaPredicted RBP14.51□□□□□ -0.09
SPG11-203ENST00000535302 AFMP43652 599 aa14.51□□□□□ -0.09
SPG11-203ENST00000535302 CTR9Q6PD62 1173 aa14.51□□□□□ -0.09
SPG11-203ENST00000535302 SCAND2PQ9GZW5 306 aaPredicted RBP14.51□□□□□ -0.09
SPG11-203ENST00000535302 STX8Q9UNK0 236 aa14.51□□□□□ -0.09
SPG11-203ENST00000535302 CHST3Q7LGC8 479 aa14.51□□□□□ -0.09
SPG11-203ENST00000535302 NEK1Q96PY6 1258 aa14.51□□□□□ -0.09
SPG11-203ENST00000535302 MEIS3Q99687 375 aa14.51□□□□□ -0.09
SPG11-203ENST00000535302 PA2G4Q9UQ80 394 aaKnown RBP14.51□□□□□ -0.09
SPG11-203ENST00000535302 ARID5AQ03989 594 aa14.5□□□□□ -0.09
SPG11-203ENST00000535302 RNF41Q9H4P4 317 aaPredicted RBP14.5□□□□□ -0.09
SPG11-203ENST00000535302 HMGB1P09429 215 aaKnown RBP14.5□□□□□ -0.09
SPG11-203ENST00000535302 STX6O43752 255 aa14.5□□□□□ -0.09
SPG11-203ENST00000535302 GCOM1H8Y6P7 765 aaPredicted RBP14.5□□□□□ -0.09
SPG11-203ENST00000535302 MYZAPP0CAP1 466 aa14.5□□□□□ -0.09
SPG11-203ENST00000535302 ATP2B3Q16720 1220 aa14.5□□□□□ -0.09
SPG11-203ENST00000535302 XAGE3Q8WTP9 111 aa14.5□□□□□ -0.09
SPG11-203ENST00000535302 MAP3K9P80192 1104 aa14.5□□□□□ -0.09
SPG11-203ENST00000535302 MXRA7P84157 204 aa14.5□□□□□ -0.09
SPG11-203ENST00000535302 PTGS1P23219 599 aa14.5□□□□□ -0.09
SPG11-203ENST00000535302 TNNQ9UQP3 1299 aa14.49□□□□□ -0.09
SPG11-203ENST00000535302 KIF14Q15058 1648 aa14.49□□□□□ -0.09
SPG11-203ENST00000535302 SYNCQ9H7C4 482 aa14.49□□□□□ -0.09
SPG11-203ENST00000535302 A0A1W2PRG0 241 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms