RNA–Protein interactions for RNA: ENST00000535177.1

CYB561A3-205, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,026 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-205ENST00000535177 KSR2Q6VAB6 950 aa18.22■□□□□ 0.51
CYB561A3-205ENST00000535177 GIGYF2Q6Y7W6 1299 aaKnown RBP18.22■□□□□ 0.51
CYB561A3-205ENST00000535177 PI4KAP1Q8N8J0 262 aa18.22■□□□□ 0.51
CYB561A3-205ENST00000535177 RNF181Q9P0P0 153 aa18.22■□□□□ 0.51
CYB561A3-205ENST00000535177 NOB1Q9ULX3 412 aaKnown RBP18.22■□□□□ 0.51
CYB561A3-205ENST00000535177 NUP98P52948 1817 aa18.21■□□□□ 0.51
CYB561A3-205ENST00000535177 RASSF7Q02833 373 aa18.21■□□□□ 0.51
CYB561A3-205ENST00000535177 BICDL1Q6ZP65 573 aa18.21■□□□□ 0.51
CYB561A3-205ENST00000535177 FRAT1Q92837 279 aaPredicted RBP18.21■□□□□ 0.51
CYB561A3-205ENST00000535177 MAP3K2Q9Y2U5 619 aa18.21■□□□□ 0.51
CYB561A3-205ENST00000535177 HSP90AB3PQ58FF7 597 aa18.2■□□□□ 0.5
CYB561A3-205ENST00000535177 F6X3S4 739 aa18.19■□□□□ 0.5
CYB561A3-205ENST00000535177 IPO8O15397 1037 aaKnown RBP18.19■□□□□ 0.5
CYB561A3-205ENST00000535177 C2CD5Q86YS7 1000 aa18.19■□□□□ 0.5
CYB561A3-205ENST00000535177 DNAAF4Q8WXU2 420 aa18.19■□□□□ 0.5
CYB561A3-205ENST00000535177 ARHGAP45Q92619 1136 aa18.19■□□□□ 0.5
CYB561A3-205ENST00000535177 METTL22Q9BUU2 404 aaPredicted RBP18.19■□□□□ 0.5
CYB561A3-205ENST00000535177 API5Q9BZZ5 524 aaKnown RBP18.19■□□□□ 0.5
CYB561A3-205ENST00000535177 RRAGCQ9HB90 399 aa18.19■□□□□ 0.5
CYB561A3-205ENST00000535177 COL11A2P13942 1736 aaPredicted RBP18.18■□□□□ 0.5
CYB561A3-205ENST00000535177 APLP1P51693 650 aa18.18■□□□□ 0.5
CYB561A3-205ENST00000535177 ZKSCAN2Q63HK3 967 aa18.18■□□□□ 0.5
CYB561A3-205ENST00000535177 ATF7IPQ6VMQ6 1270 aa18.18■□□□□ 0.5
CYB561A3-205ENST00000535177 CCDC24Q8N4L8 307 aa18.18■□□□□ 0.5
CYB561A3-205ENST00000535177 RBM46Q8TBY0 533 aaKnown RBP18.18■□□□□ 0.5
CYB561A3-205ENST00000535177 TRIM27P14373 513 aa18.17■□□□□ 0.5
CYB561A3-205ENST00000535177 NEXNQ0ZGT2 675 aa18.17■□□□□ 0.5
CYB561A3-205ENST00000535177 TCIRG1Q13488 830 aa18.17■□□□□ 0.5
CYB561A3-205ENST00000535177 IFFO2Q5TF58 517 aa18.17■□□□□ 0.5
CYB561A3-205ENST00000535177 PRR5LQ6MZQ0 368 aa18.17■□□□□ 0.5
CYB561A3-205ENST00000535177 TTLL6Q8N841 843 aa18.17■□□□□ 0.5
CYB561A3-205ENST00000535177 MYD88Q99836 296 aa18.17■□□□□ 0.5
CYB561A3-205ENST00000535177 NIP7Q9Y221 180 aaKnown RBP eCLIP18.17■□□□□ 0.5
CYB561A3-205ENST00000535177 FER1L6Q2WGJ9 1857 aa18.16■□□□□ 0.5
CYB561A3-205ENST00000535177 TNRC6CQ9HCJ0 1690 aaKnown RBP18.16■□□□□ 0.5
CYB561A3-205ENST00000535177 WDR90Q96KV7 1748 aa18.16■□□□□ 0.5
CYB561A3-205ENST00000535177 H0YIN7 160 aa18.16■□□□□ 0.5
CYB561A3-205ENST00000535177 NFKBIEO00221 500 aa18.16■□□□□ 0.5
CYB561A3-205ENST00000535177 GPTP24298 496 aa18.16■□□□□ 0.5
CYB561A3-205ENST00000535177 ZNF34Q8IZ26 560 aa18.16■□□□□ 0.5
CYB561A3-205ENST00000535177 SETDB2Q96T68 719 aa18.16■□□□□ 0.5
CYB561A3-205ENST00000535177 ABCC4O15439 1325 aa18.16■□□□□ 0.5
CYB561A3-205ENST00000535177 UBN2Q6ZU65 1347 aa18.16■□□□□ 0.5
CYB561A3-205ENST00000535177 SLC4A10Q6U841 1118 aa18.15■□□□□ 0.5
CYB561A3-205ENST00000535177 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.15■□□□□ 0.5
CYB561A3-205ENST00000535177 ISCA1Q9BUE6 129 aa18.15■□□□□ 0.5
CYB561A3-205ENST00000535177 BRIP1Q9BX63 1249 aa18.15■□□□□ 0.5
CYB561A3-205ENST00000535177 KDM2BQ8NHM5 1336 aa18.15■□□□□ 0.5
CYB561A3-205ENST00000535177 IBTKQ9P2D0 1353 aaPredicted RBP18.15■□□□□ 0.5
CYB561A3-205ENST00000535177 SLX4Q8IY92 1834 aa18.14■□□□□ 0.5
CYB561A3-205ENST00000535177 DICER1Q9UPY3 1922 aaKnown RBP18.14■□□□□ 0.49
CYB561A3-205ENST00000535177 ATP5J2-PTCD1G3V325 749 aa18.14■□□□□ 0.49
CYB561A3-205ENST00000535177 CENPBP07199 599 aaPredicted RBP18.14■□□□□ 0.49
CYB561A3-205ENST00000535177 HTRA3P83110 453 aa18.14■□□□□ 0.49
CYB561A3-205ENST00000535177 PARP10Q53GL7 1025 aa18.14■□□□□ 0.49
CYB561A3-205ENST00000535177 LINS1Q8NG48 757 aa18.14■□□□□ 0.49
CYB561A3-205ENST00000535177 CACNA1SQ13698 1873 aa18.14■□□□□ 0.49
CYB561A3-205ENST00000535177 TIAM2Q8IVF5 1701 aa18.13■□□□□ 0.49
CYB561A3-205ENST00000535177 IGKV5-2P06315 115 aa18.13■□□□□ 0.49
CYB561A3-205ENST00000535177 LMNB1P20700 586 aa18.13■□□□□ 0.49
CYB561A3-205ENST00000535177 CWF19L2Q2TBE0 894 aaKnown RBP18.13■□□□□ 0.49
CYB561A3-205ENST00000535177 BEND3Q5T5X7 828 aa18.13■□□□□ 0.49
CYB561A3-205ENST00000535177 NLRP10Q86W26 655 aa18.13■□□□□ 0.49
CYB561A3-205ENST00000535177 FTSJ3Q8IY81 847 aaKnown RBP18.13■□□□□ 0.49
CYB561A3-205ENST00000535177 TNNQ9UQP3 1299 aa18.13■□□□□ 0.49
CYB561A3-205ENST00000535177 NEURL1BA8MQ27 555 aa18.12■□□□□ 0.49
CYB561A3-205ENST00000535177 POTECB2RU33 542 aa18.12■□□□□ 0.49
CYB561A3-205ENST00000535177 PLIN1O60240 522 aa18.12■□□□□ 0.49
CYB561A3-205ENST00000535177 RRP1P56182 461 aaKnown RBP18.12■□□□□ 0.49
CYB561A3-205ENST00000535177 FSTL1Q12841 308 aa18.12■□□□□ 0.49
CYB561A3-205ENST00000535177 TRIM28Q13263 835 aaKnown RBP18.12■□□□□ 0.49
CYB561A3-205ENST00000535177 CCDC191Q8NCU4 936 aa18.12■□□□□ 0.49
CYB561A3-205ENST00000535177 CLUAP1Q96AJ1 413 aa18.12■□□□□ 0.49
CYB561A3-205ENST00000535177 SRCIN1Q9C0H9 1055 aa18.12■□□□□ 0.49
CYB561A3-205ENST00000535177 GLTPD2A6NH11 291 aa18.11■□□□□ 0.49
CYB561A3-205ENST00000535177 PDE6BP35913 854 aa18.11■□□□□ 0.49
CYB561A3-205ENST00000535177 CCT4P50991 539 aaKnown RBP18.11■□□□□ 0.49
CYB561A3-205ENST00000535177 PPP1R42Q7Z4L9 355 aa18.11■□□□□ 0.49
CYB561A3-205ENST00000535177 C16orf71Q8IYS4 520 aaPredicted RBP18.11■□□□□ 0.49
CYB561A3-205ENST00000535177 ZNF622Q969S3 477 aaKnown RBP eCLIP18.11■□□□□ 0.49
CYB561A3-205ENST00000535177 CWC25Q9NXE8 425 aaPredicted RBP18.11■□□□□ 0.49
CYB561A3-205ENST00000535177 ZC3H4Q9UPT8 1303 aaKnown RBP18.11■□□□□ 0.49
CYB561A3-205ENST00000535177 C21orf2O43822 256 aa18.1■□□□□ 0.49
CYB561A3-205ENST00000535177 ALDH1L1O75891 902 aa18.1■□□□□ 0.49
CYB561A3-205ENST00000535177 MS4A1P11836 297 aa18.1■□□□□ 0.49
CYB561A3-205ENST00000535177 SUSD4Q5VX71 490 aa18.1■□□□□ 0.49
CYB561A3-205ENST00000535177 NBPF5PQ86XG9 351 aaPredicted RBP18.1■□□□□ 0.49
CYB561A3-205ENST00000535177 DZIP1LQ8IYY4 767 aaKnown RBP18.1■□□□□ 0.49
CYB561A3-205ENST00000535177 NYXQ9GZU5 481 aa18.1■□□□□ 0.49
CYB561A3-205ENST00000535177 ZNF219Q9P2Y4 722 aaPredicted RBP18.1■□□□□ 0.49
CYB561A3-205ENST00000535177 RNF123Q5XPI4 1314 aa18.09■□□□□ 0.49
CYB561A3-205ENST00000535177 FAM177BA6PVY3 158 aa18.09■□□□□ 0.49
CYB561A3-205ENST00000535177 NTSR2O95665 410 aa18.09■□□□□ 0.49
CYB561A3-205ENST00000535177 SRGNP10124 158 aa18.09■□□□□ 0.49
CYB561A3-205ENST00000535177 CNBD1Q8NA66 436 aa18.09■□□□□ 0.49
CYB561A3-205ENST00000535177 UTP14AQ9BVJ6 771 aaKnown RBP18.09■□□□□ 0.49
CYB561A3-205ENST00000535177 PDZRN3Q9UPQ7 1066 aa18.09■□□□□ 0.49
CYB561A3-205ENST00000535177 NPHP1O15259 732 aa18.08■□□□□ 0.48
CYB561A3-205ENST00000535177 RLBP1P12271 317 aa18.08■□□□□ 0.48
CYB561A3-205ENST00000535177 GCKRQ14397 625 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms