RNA–Protein interactions for RNA: ENST00000535143.1

MSRB3-204, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 419 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-204ENST00000535143 RGL2O15211 777 aa22.74■■□□□ 1.23
MSRB3-204ENST00000535143 GPTP24298 496 aa22.74■■□□□ 1.23
MSRB3-204ENST00000535143 PPP2R1AP30153 589 aa22.74■■□□□ 1.23
MSRB3-204ENST00000535143 CRY2Q49AN0 593 aa22.74■■□□□ 1.23
MSRB3-204ENST00000535143 PSMD1Q99460 953 aa22.74■■□□□ 1.23
MSRB3-204ENST00000535143 WDR33Q9C0J8 1336 aaKnown RBP22.74■■□□□ 1.23
MSRB3-204ENST00000535143 EIF6P56537 245 aaKnown RBP22.73■■□□□ 1.23
MSRB3-204ENST00000535143 TAF7Q15545 349 aaPredicted RBP22.73■■□□□ 1.23
MSRB3-204ENST00000535143 TTLL7Q6ZT98 887 aa22.73■■□□□ 1.23
MSRB3-204ENST00000535143 GRM1Q13255 1194 aa22.72■■□□□ 1.23
MSRB3-204ENST00000535143 PAXIP1Q6ZW49 1069 aaPredicted RBP22.72■■□□□ 1.23
MSRB3-204ENST00000535143 RPGRQ92834 1020 aaKnown RBP22.72■■□□□ 1.23
MSRB3-204ENST00000535143 DDX21Q9NR30 783 aaKnown RBP eCLIP22.72■■□□□ 1.23
MSRB3-204ENST00000535143 UBN2Q6ZU65 1347 aa22.72■■□□□ 1.23
MSRB3-204ENST00000535143 LMOD1P29536 600 aaPredicted RBP22.71■■□□□ 1.23
MSRB3-204ENST00000535143 EPS15P42566 896 aa22.71■■□□□ 1.23
MSRB3-204ENST00000535143 SCNN1DP51172 638 aa22.71■■□□□ 1.23
MSRB3-204ENST00000535143 NYXQ9GZU5 481 aa22.71■■□□□ 1.23
MSRB3-204ENST00000535143 ZBTB3Q9H5J0 574 aa22.71■■□□□ 1.23
MSRB3-204ENST00000535143 RRP7AQ9Y3A4 280 aaKnown RBP22.71■■□□□ 1.23
MSRB3-204ENST00000535143 MAP3K15Q6ZN16 1313 aa22.71■■□□□ 1.23
MSRB3-204ENST00000535143 HTATSF1O43719 755 aaKnown RBP22.7■■□□□ 1.22
MSRB3-204ENST00000535143 MYL6BP14649 208 aa22.7■■□□□ 1.22
MSRB3-204ENST00000535143 C3orf67Q6ZVT6 689 aa22.7■■□□□ 1.22
MSRB3-204ENST00000535143 LARGE2Q8N3Y3 721 aa22.7■■□□□ 1.22
MSRB3-204ENST00000535143 THSD7BQ9C0I4 1608 aa22.7■■□□□ 1.22
MSRB3-204ENST00000535143 TRPM7Q96QT4 1865 aa22.7■■□□□ 1.22
MSRB3-204ENST00000535143 RIC1Q4ADV7 1423 aa22.69■■□□□ 1.22
MSRB3-204ENST00000535143 KIF6Q6ZMV9 814 aa22.69■■□□□ 1.22
MSRB3-204ENST00000535143 TRAF5O00463 557 aa22.68■■□□□ 1.22
MSRB3-204ENST00000535143 PPEF1O14829 653 aaPredicted RBP22.68■■□□□ 1.22
MSRB3-204ENST00000535143 SUSD4Q5VX71 490 aa22.68■■□□□ 1.22
MSRB3-204ENST00000535143 ABHD8Q96I13 439 aa22.68■■□□□ 1.22
MSRB3-204ENST00000535143 THUMPD2Q9BTF0 503 aaKnown RBP22.68■■□□□ 1.22
MSRB3-204ENST00000535143 ERVV-1B6SEH8 477 aa22.67■■□□□ 1.22
MSRB3-204ENST00000535143 MAP2K1Q02750 393 aaPredicted RBP22.67■■□□□ 1.22
MSRB3-204ENST00000535143 CC2D2BQ6DHV5 1058 aa22.67■■□□□ 1.22
MSRB3-204ENST00000535143 CYP4F22Q6NT55 531 aa22.67■■□□□ 1.22
MSRB3-204ENST00000535143 HOXA10P31260 410 aaPredicted RBP22.66■■□□□ 1.22
MSRB3-204ENST00000535143 CAPNS2Q96L46 248 aa22.66■■□□□ 1.22
MSRB3-204ENST00000535143 IBTKQ9P2D0 1353 aaPredicted RBP22.65■■□□□ 1.22
MSRB3-204ENST00000535143 EIF4A1P60842 406 aaKnown RBP22.65■■□□□ 1.22
MSRB3-204ENST00000535143 NIM1KQ8IY84 436 aa22.65■■□□□ 1.22
MSRB3-204ENST00000535143 RBM17Q96I25 401 aaKnown RBP22.65■■□□□ 1.22
MSRB3-204ENST00000535143 PPIP5K2O43314 1243 aa22.64■■□□□ 1.21
MSRB3-204ENST00000535143 NTSR2O95665 410 aa22.64■■□□□ 1.21
MSRB3-204ENST00000535143 AOC3Q16853 763 aa22.64■■□□□ 1.21
MSRB3-204ENST00000535143 TSKSQ9UJT2 592 aa22.64■■□□□ 1.21
MSRB3-204ENST00000535143 FAM161AQ3B820 660 aa22.63■■□□□ 1.21
MSRB3-204ENST00000535143 CST9Q5W186 159 aa22.62■■□□□ 1.21
MSRB3-204ENST00000535143 ZNF34Q8IZ26 560 aa22.62■■□□□ 1.21
MSRB3-204ENST00000535143 PNISRQ8TF01 805 aaKnown RBP22.62■■□□□ 1.21
MSRB3-204ENST00000535143 CRAMP1Q96RY5 1269 aa22.62■■□□□ 1.21
MSRB3-204ENST00000535143 AOC2O75106 756 aa22.61■■□□□ 1.21
MSRB3-204ENST00000535143 USP50Q70EL3 339 aaPredicted RBP22.61■■□□□ 1.21
MSRB3-204ENST00000535143 GPR101Q96P66 508 aaPredicted RBP22.61■■□□□ 1.21
MSRB3-204ENST00000535143 LAMB2P55268 1798 aa22.61■■□□□ 1.21
MSRB3-204ENST00000535143 ECE1P42892 770 aa22.6■■□□□ 1.21
MSRB3-204ENST00000535143 ABCC4O15439 1325 aa22.59■■□□□ 1.21
MSRB3-204ENST00000535143 NEFMP07197 916 aa22.59■■□□□ 1.21
MSRB3-204ENST00000535143 GIGYF2Q6Y7W6 1299 aaKnown RBP22.59■■□□□ 1.21
MSRB3-204ENST00000535143 BEGAINQ9BUH8 593 aa22.59■■□□□ 1.21
MSRB3-204ENST00000535143 TLL2Q9Y6L7 1015 aa22.59■■□□□ 1.21
MSRB3-204ENST00000535143 ANXA1P04083 346 aa22.58■■□□□ 1.21
MSRB3-204ENST00000535143 GPRC5DQ9NZD1 345 aa22.58■■□□□ 1.21
MSRB3-204ENST00000535143 CCDC85CA6NKD9 419 aa22.57■■□□□ 1.2
MSRB3-204ENST00000535143 NFE2L2Q16236 605 aa22.57■■□□□ 1.2
MSRB3-204ENST00000535143 GRIPAP1Q4V328 841 aa22.57■■□□□ 1.2
MSRB3-204ENST00000535143 PPP1R42Q7Z4L9 355 aa22.57■■□□□ 1.2
MSRB3-204ENST00000535143 NLRP3Q96P20 1036 aa22.57■■□□□ 1.2
MSRB3-204ENST00000535143 PLEKHF1Q96S99 279 aa22.57■■□□□ 1.2
MSRB3-204ENST00000535143 GLIS2Q9BZE0 524 aaPredicted RBP22.57■■□□□ 1.2
MSRB3-204ENST00000535143 ADARB2Q9NS39 739 aaKnown RBP22.57■■□□□ 1.2
MSRB3-204ENST00000535143 ATP6V0A2Q9Y487 856 aa22.57■■□□□ 1.2
MSRB3-204ENST00000535143 ANKRD36CQ5JPF3 1778 aa22.57■■□□□ 1.2
MSRB3-204ENST00000535143 TAF1P21675 1872 aa22.56■■□□□ 1.2
MSRB3-204ENST00000535143 CELF2O95319 508 aaKnown RBP22.56■■□□□ 1.2
MSRB3-204ENST00000535143 EIF2S2P20042 333 aaKnown RBP22.56■■□□□ 1.2
MSRB3-204ENST00000535143 GMPSP49915 693 aaPredicted RBP22.56■■□□□ 1.2
MSRB3-204ENST00000535143 CXCL9Q07325 125 aa22.56■■□□□ 1.2
MSRB3-204ENST00000535143 PROSER3Q2NL68 480 aa22.56■■□□□ 1.2
MSRB3-204ENST00000535143 ZNF428Q96B54 188 aa22.55■■□□□ 1.2
MSRB3-204ENST00000535143 UTP14AQ9BVJ6 771 aaKnown RBP22.55■■□□□ 1.2
MSRB3-204ENST00000535143 TMX4Q9H1E5 349 aaPredicted RBP22.55■■□□□ 1.2
MSRB3-204ENST00000535143 ZNF408Q9H9D4 720 aa22.55■■□□□ 1.2
MSRB3-204ENST00000535143 CASP8AP2Q9UKL3 1982 aa22.55■■□□□ 1.2
MSRB3-204ENST00000535143 PARP10Q53GL7 1025 aa22.54■■□□□ 1.2
MSRB3-204ENST00000535143 LRP10Q7Z4F1 713 aa22.54■■□□□ 1.2
MSRB3-204ENST00000535143 ZNRF3Q9ULT6 936 aa22.54■■□□□ 1.2
MSRB3-204ENST00000535143 SHTN1A0MZ66 631 aa22.53■■□□□ 1.2
MSRB3-204ENST00000535143 RAD17O75943 681 aa22.53■■□□□ 1.2
MSRB3-204ENST00000535143 PDIA6Q15084 440 aa22.53■■□□□ 1.2
MSRB3-204ENST00000535143 SAPCD2Q86UD0 394 aa22.53■■□□□ 1.2
MSRB3-204ENST00000535143 TRPM4Q8TD43 1214 aa22.53■■□□□ 1.2
MSRB3-204ENST00000535143 TSPYL4Q9UJ04 414 aa22.53■■□□□ 1.2
MSRB3-204ENST00000535143 ERBB4Q15303 1308 aa22.53■■□□□ 1.2
MSRB3-204ENST00000535143 HCLS1P14317 486 aaPredicted RBP22.52■■□□□ 1.2
MSRB3-204ENST00000535143 DPP8Q6V1X1 898 aaPredicted RBP22.52■■□□□ 1.2
MSRB3-204ENST00000535143 NECTIN2Q92692 538 aa22.52■■□□□ 1.2
MSRB3-204ENST00000535143 BCL2L13Q9BXK5 485 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms