RNA–Protein interactions for RNA: ENST00000534856.1

AP003108.1-201, humanhuman

TSL 4 BASIC

Gene AP003108.1, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003108.1-201ENST00000534856 F6X3S4 739 aa16.59■□□□□ 0.25
AP003108.1-201ENST00000534856 PDE6BP35913 854 aa16.59■□□□□ 0.25
AP003108.1-201ENST00000534856 TRIM28Q13263 835 aaKnown RBP16.59■□□□□ 0.25
AP003108.1-201ENST00000534856 C2CD5Q86YS7 1000 aa16.59■□□□□ 0.25
AP003108.1-201ENST00000534856 SYNE4Q8N205 404 aa16.59■□□□□ 0.25
AP003108.1-201ENST00000534856 TRMT112Q9UI30 125 aaKnown RBP16.59■□□□□ 0.25
AP003108.1-201ENST00000534856 N4BP2Q86UW6 1770 aaPredicted RBP16.59■□□□□ 0.25
AP003108.1-201ENST00000534856 IGKV5-2P06315 115 aa16.58■□□□□ 0.24
AP003108.1-201ENST00000534856 RARSP54136 660 aaKnown RBP16.58■□□□□ 0.24
AP003108.1-201ENST00000534856 DNAAF4Q8WXU2 420 aa16.58■□□□□ 0.24
AP003108.1-201ENST00000534856 ANKRD31Q8N7Z5 1873 aa16.58■□□□□ 0.24
AP003108.1-201ENST00000534856 H0YIN7 160 aa16.57■□□□□ 0.24
AP003108.1-201ENST00000534856 NEXNQ0ZGT2 675 aa16.57■□□□□ 0.24
AP003108.1-201ENST00000534856 CWF19L2Q2TBE0 894 aaKnown RBP16.57■□□□□ 0.24
AP003108.1-201ENST00000534856 SH3TC1Q8TE82 1336 aa16.56■□□□□ 0.24
AP003108.1-201ENST00000534856 YBX3P16989 372 aaKnown RBP eCLIP16.56■□□□□ 0.24
AP003108.1-201ENST00000534856 GPR162Q16538 588 aa16.56■□□□□ 0.24
AP003108.1-201ENST00000534856 RTL5Q5HYW3 569 aaPredicted RBP16.56■□□□□ 0.24
AP003108.1-201ENST00000534856 CCDC191Q8NCU4 936 aa16.56■□□□□ 0.24
AP003108.1-201ENST00000534856 FAM89AQ96GI7 184 aa16.56■□□□□ 0.24
AP003108.1-201ENST00000534856 CWC25Q9NXE8 425 aaPredicted RBP16.56■□□□□ 0.24
AP003108.1-201ENST00000534856 TNRC6CQ9HCJ0 1690 aaKnown RBP16.56■□□□□ 0.24
AP003108.1-201ENST00000534856 RNF123Q5XPI4 1314 aa16.55■□□□□ 0.24
AP003108.1-201ENST00000534856 KLRG2A4D1S0 409 aaPredicted RBP16.55■□□□□ 0.24
AP003108.1-201ENST00000534856 NEURL1BA8MQ27 555 aa16.55■□□□□ 0.24
AP003108.1-201ENST00000534856 SRGNP10124 158 aa16.55■□□□□ 0.24
AP003108.1-201ENST00000534856 HCLS1P14317 486 aaPredicted RBP16.55■□□□□ 0.24
AP003108.1-201ENST00000534856 SLC10A5Q5PT55 438 aa16.55■□□□□ 0.24
AP003108.1-201ENST00000534856 C3orf67Q6ZVT6 689 aa16.55■□□□□ 0.24
AP003108.1-201ENST00000534856 JARID2Q92833 1246 aaPredicted RBP16.55■□□□□ 0.24
AP003108.1-201ENST00000534856 PIM2Q9P1W9 311 aa16.55■□□□□ 0.24
AP003108.1-201ENST00000534856 RIC1Q4ADV7 1423 aa16.54■□□□□ 0.24
AP003108.1-201ENST00000534856 COL11A2P13942 1736 aaPredicted RBP16.54■□□□□ 0.24
AP003108.1-201ENST00000534856 PTPRCP08575 1304 aa16.54■□□□□ 0.24
AP003108.1-201ENST00000534856 LINS1Q8NG48 757 aa16.54■□□□□ 0.24
AP003108.1-201ENST00000534856 ZNF622Q969S3 477 aaKnown RBP eCLIP16.54■□□□□ 0.24
AP003108.1-201ENST00000534856 NOB1Q9ULX3 412 aaKnown RBP16.54■□□□□ 0.24
AP003108.1-201ENST00000534856 PDZRN3Q9UPQ7 1066 aa16.54■□□□□ 0.24
AP003108.1-201ENST00000534856 BCS1LQ9Y276 419 aa16.54■□□□□ 0.24
AP003108.1-201ENST00000534856 CACNA1FO60840 1977 aa16.53■□□□□ 0.24
AP003108.1-201ENST00000534856 DCAF8L1A6NGE4 600 aa16.53■□□□□ 0.24
AP003108.1-201ENST00000534856 BCAR3O75815 825 aa16.53■□□□□ 0.24
AP003108.1-201ENST00000534856 PCCAP05165 728 aaPredicted RBP16.53■□□□□ 0.24
AP003108.1-201ENST00000534856 BEND3Q5T5X7 828 aa16.53■□□□□ 0.24
AP003108.1-201ENST00000534856 SLC4A10Q6U841 1118 aa16.53■□□□□ 0.24
AP003108.1-201ENST00000534856 ZBTB38Q8NAP3 1195 aaPredicted RBP16.53■□□□□ 0.24
AP003108.1-201ENST00000534856 BRPF1P55201 1214 aaPredicted RBP16.52■□□□□ 0.24
AP003108.1-201ENST00000534856 DALRD3Q5D0E6 543 aaKnown RBP16.52■□□□□ 0.24
AP003108.1-201ENST00000534856 TTLL6Q8N841 843 aa16.52■□□□□ 0.24
AP003108.1-201ENST00000534856 MASTLQ96GX5 879 aa16.52■□□□□ 0.24
AP003108.1-201ENST00000534856 NLRP3Q96P20 1036 aa16.52■□□□□ 0.24
AP003108.1-201ENST00000534856 IRS4O14654 1257 aaPredicted RBP16.51■□□□□ 0.23
AP003108.1-201ENST00000534856 NPR1P16066 1061 aa16.51■□□□□ 0.23
AP003108.1-201ENST00000534856 GCKRQ14397 625 aa16.51■□□□□ 0.23
AP003108.1-201ENST00000534856 CRY2Q49AN0 593 aa16.51■□□□□ 0.23
AP003108.1-201ENST00000534856 STYK1Q6J9G0 422 aa16.51■□□□□ 0.23
AP003108.1-201ENST00000534856 DLEC1Q9Y238 1755 aa16.51■□□□□ 0.23
AP003108.1-201ENST00000534856 GOLGB1Q14789 3259 aaKnown RBP16.5■□□□□ 0.23
AP003108.1-201ENST00000534856 H7C1W4 665 aa16.5■□□□□ 0.23
AP003108.1-201ENST00000534856 SRCIN1Q9C0H9 1055 aa16.5■□□□□ 0.23
AP003108.1-201ENST00000534856 BRCA1P38398 1863 aaKnown RBP16.5■□□□□ 0.23
AP003108.1-201ENST00000534856 KIF16BQ96L93 1317 aa16.49■□□□□ 0.23
AP003108.1-201ENST00000534856 UBE3BQ7Z3V4 1068 aa16.49■□□□□ 0.23
AP003108.1-201ENST00000534856 RPGRQ92834 1020 aaKnown RBP16.49■□□□□ 0.23
AP003108.1-201ENST00000534856 FRAT1Q92837 279 aaPredicted RBP16.49■□□□□ 0.23
AP003108.1-201ENST00000534856 CNKSR1Q969H4 720 aa16.49■□□□□ 0.23
AP003108.1-201ENST00000534856 CDHR2Q9BYE9 1310 aa16.48■□□□□ 0.23
AP003108.1-201ENST00000534856 DDX60Q8IY21 1712 aaKnown RBP16.48■□□□□ 0.23
AP003108.1-201ENST00000534856 GRIN3BO60391 1043 aa16.48■□□□□ 0.23
AP003108.1-201ENST00000534856 ALDH1L1O75891 902 aa16.48■□□□□ 0.23
AP003108.1-201ENST00000534856 HOXA10P31260 410 aaPredicted RBP16.48■□□□□ 0.23
AP003108.1-201ENST00000534856 PRPF40BQ6NWY9 871 aaKnown RBP16.48■□□□□ 0.23
AP003108.1-201ENST00000534856 RBM17Q96I25 401 aaKnown RBP16.48■□□□□ 0.23
AP003108.1-201ENST00000534856 API5Q9BZZ5 524 aaKnown RBP16.48■□□□□ 0.23
AP003108.1-201ENST00000534856 ZNF219Q9P2Y4 722 aaPredicted RBP16.48■□□□□ 0.23
AP003108.1-201ENST00000534856 CASP7P55210 303 aa16.47■□□□□ 0.23
AP003108.1-201ENST00000534856 ARHGAP45Q92619 1136 aa16.47■□□□□ 0.23
AP003108.1-201ENST00000534856 TNNQ9UQP3 1299 aa16.47■□□□□ 0.23
AP003108.1-201ENST00000534856 C21orf2O43822 256 aa16.46■□□□□ 0.23
AP003108.1-201ENST00000534856 PDE8AO60658 829 aa16.46■□□□□ 0.23
AP003108.1-201ENST00000534856 ALDH1B1P30837 517 aa16.46■□□□□ 0.23
AP003108.1-201ENST00000534856 SF3B3Q15393 1217 aaKnown RBP16.46■□□□□ 0.23
AP003108.1-201ENST00000534856 LAMB2P55268 1798 aa16.46■□□□□ 0.22
AP003108.1-201ENST00000534856 ABCC4O15439 1325 aa16.45■□□□□ 0.22
AP003108.1-201ENST00000534856 IPO8O15397 1037 aaKnown RBP16.45■□□□□ 0.22
AP003108.1-201ENST00000534856 HSP90B1P14625 803 aaKnown RBP16.45■□□□□ 0.22
AP003108.1-201ENST00000534856 ARHGAP27Q6ZUM4 889 aa16.45■□□□□ 0.22
AP003108.1-201ENST00000534856 CCDC85AQ96PX6 553 aaPredicted RBP16.45■□□□□ 0.22
AP003108.1-201ENST00000534856 CRAMP1Q96RY5 1269 aa16.45■□□□□ 0.22
AP003108.1-201ENST00000534856 C9orf78Q9NZ63 289 aaPredicted RBP16.45■□□□□ 0.22
AP003108.1-201ENST00000534856 GRM8O00222 908 aa16.44■□□□□ 0.22
AP003108.1-201ENST00000534856 TRIM27P14373 513 aa16.44■□□□□ 0.22
AP003108.1-201ENST00000534856 ZKSCAN2Q63HK3 967 aa16.44■□□□□ 0.22
AP003108.1-201ENST00000534856 ATF7IPQ6VMQ6 1270 aa16.44■□□□□ 0.22
AP003108.1-201ENST00000534856 DDX46Q7L014 1031 aaKnown RBP16.44■□□□□ 0.22
AP003108.1-201ENST00000534856 SLC51AQ86UW1 340 aa16.44■□□□□ 0.22
AP003108.1-201ENST00000534856 UTRNP46939 3433 aa16.44■□□□□ 0.22
AP003108.1-201ENST00000534856 SLX4Q8IY92 1834 aa16.43■□□□□ 0.22
AP003108.1-201ENST00000534856 NBPF7P0C2Y1 421 aaPredicted RBP16.43■□□□□ 0.22
AP003108.1-201ENST00000534856 CCT4P50991 539 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms