RNA–Protein interactions for RNA: ENST00000534763.1

CCS-209, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-209ENST00000534763 FAM177BA6PVY3 158 aa16.57■□□□□ 0.24
CCS-209ENST00000534763 TRMT2AQ8IZ69 625 aaKnown RBP16.57■□□□□ 0.24
CCS-209ENST00000534763 ZNF428Q96B54 188 aa16.57■□□□□ 0.24
CCS-209ENST00000534763 ARFGEF1Q9Y6D6 1849 aa16.56■□□□□ 0.24
CCS-209ENST00000534763 ANKRD36CQ5JPF3 1778 aa16.56■□□□□ 0.24
CCS-209ENST00000534763 ABCC12Q96J65 1359 aa16.56■□□□□ 0.24
CCS-209ENST00000534763 ALDH1B1P30837 517 aa16.56■□□□□ 0.24
CCS-209ENST00000534763 HOXA10P31260 410 aaPredicted RBP16.56■□□□□ 0.24
CCS-209ENST00000534763 KSR2Q6VAB6 950 aa16.56■□□□□ 0.24
CCS-209ENST00000534763 NUTM1Q86Y26 1132 aa16.56■□□□□ 0.24
CCS-209ENST00000534763 ZNF622Q969S3 477 aaKnown RBP eCLIP16.56■□□□□ 0.241e-6■□□□□ 10.5
CCS-209ENST00000534763 METTL22Q9BUU2 404 aaPredicted RBP16.56■□□□□ 0.24
CCS-209ENST00000534763 WWC3Q9ULE0 1092 aa16.56■□□□□ 0.24
CCS-209ENST00000534763 SH3TC1Q8TE82 1336 aa16.55■□□□□ 0.24
CCS-209ENST00000534763 SOGA3Q5TF21 947 aa16.55■□□□□ 0.24
CCS-209ENST00000534763 CCDC191Q8NCU4 936 aa16.55■□□□□ 0.24
CCS-209ENST00000534763 NLRP3Q96P20 1036 aa16.55■□□□□ 0.24
CCS-209ENST00000534763 TRMT112Q9UI30 125 aaKnown RBP16.55■□□□□ 0.24
CCS-209ENST00000534763 COL11A2P13942 1736 aaPredicted RBP16.54■□□□□ 0.24
CCS-209ENST00000534763 FLIIQ13045 1269 aa16.54■□□□□ 0.24
CCS-209ENST00000534763 ARHGAP27Q6ZUM4 889 aa16.54■□□□□ 0.24
CCS-209ENST00000534763 CHD4Q14839 1912 aa16.54■□□□□ 0.24
CCS-209ENST00000534763 PI4KAP2A4QPH2 592 aa16.53■□□□□ 0.24
CCS-209ENST00000534763 CT47B1P0C2W7 299 aaPredicted RBP16.53■□□□□ 0.24
CCS-209ENST00000534763 HSP90B1P14625 803 aaKnown RBP16.53■□□□□ 0.24
CCS-209ENST00000534763 PI4KAP1Q8N8J0 262 aa16.53■□□□□ 0.24
CCS-209ENST00000534763 MAP3K2Q9Y2U5 619 aa16.53■□□□□ 0.24
CCS-209ENST00000534763 ARFGEF2Q9Y6D5 1785 aa16.53■□□□□ 0.24
CCS-209ENST00000534763 ADCY9O60503 1353 aa16.52■□□□□ 0.24
CCS-209ENST00000534763 ATP5J2-PTCD1G3V325 749 aa16.52■□□□□ 0.24
CCS-209ENST00000534763 NEXNQ0ZGT2 675 aa16.52■□□□□ 0.24
CCS-209ENST00000534763 PRPF40BQ6NWY9 871 aaKnown RBP16.52■□□□□ 0.24
CCS-209ENST00000534763 G2E3Q7L622 706 aa16.52■□□□□ 0.24
CCS-209ENST00000534763 CRAMP1Q96RY5 1269 aa16.52■□□□□ 0.24
CCS-209ENST00000534763 TCERG1O14776 1098 aaKnown RBP16.51■□□□□ 0.23
CCS-209ENST00000534763 ZBTB38Q8NAP3 1195 aaPredicted RBP16.51■□□□□ 0.23
CCS-209ENST00000534763 C7orf43Q8WVR3 580 aa16.51■□□□□ 0.23
CCS-209ENST00000534763 RPGRQ92834 1020 aaKnown RBP16.51■□□□□ 0.23
CCS-209ENST00000534763 CDCA7LQ96GN5 454 aa16.51■□□□□ 0.23
CCS-209ENST00000534763 RBM17Q96I25 401 aaKnown RBP16.51■□□□□ 0.23
CCS-209ENST00000534763 MYD88Q99836 296 aa16.51■□□□□ 0.23
CCS-209ENST00000534763 CWC25Q9NXE8 425 aaPredicted RBP16.51■□□□□ 0.23
CCS-209ENST00000534763 LTBP3Q9NS15 1303 aa16.5■□□□□ 0.23
CCS-209ENST00000534763 TNRC6CQ9HCJ0 1690 aaKnown RBP16.5■□□□□ 0.23
CCS-209ENST00000534763 FKBP5Q13451 457 aaPredicted RBP16.5■□□□□ 0.23
CCS-209ENST00000534763 GRIPAP1Q4V328 841 aa16.5■□□□□ 0.23
CCS-209ENST00000534763 CACNA1FO60840 1977 aa16.49■□□□□ 0.23
CCS-209ENST00000534763 C21orf2O43822 256 aa16.49■□□□□ 0.23
CCS-209ENST00000534763 PCCAP05165 728 aaPredicted RBP16.49■□□□□ 0.23
CCS-209ENST00000534763 IGKV5-2P06315 115 aa16.49■□□□□ 0.23
CCS-209ENST00000534763 ALDH1L2Q3SY69 923 aa16.49■□□□□ 0.23
CCS-209ENST00000534763 CC2D2BQ6DHV5 1058 aa16.49■□□□□ 0.23
CCS-209ENST00000534763 FAM89AQ96GI7 184 aa16.49■□□□□ 0.23
CCS-209ENST00000534763 SF3B3Q15393 1217 aaKnown RBP16.48■□□□□ 0.23
CCS-209ENST00000534763 DNAAF4Q8WXU2 420 aa16.48■□□□□ 0.23
CCS-209ENST00000534763 ZC3H4Q9UPT8 1303 aaKnown RBP16.47■□□□□ 0.23
CCS-209ENST00000534763 NEURL1BA8MQ27 555 aa16.47■□□□□ 0.23
CCS-209ENST00000534763 NFKBIEO00221 500 aa16.47■□□□□ 0.23
CCS-209ENST00000534763 IRS4O14654 1257 aaPredicted RBP16.47■□□□□ 0.23
CCS-209ENST00000534763 HCLS1P14317 486 aaPredicted RBP16.47■□□□□ 0.23
CCS-209ENST00000534763 LMNB1P20700 586 aa16.47■□□□□ 0.23
CCS-209ENST00000534763 CCDC93Q567U6 631 aa16.47■□□□□ 0.23
CCS-209ENST00000534763 C3orf67Q6ZVT6 689 aa16.47■□□□□ 0.23
CCS-209ENST00000534763 RTKN2Q8IZC4 609 aa16.47■□□□□ 0.23
CCS-209ENST00000534763 SYNE4Q8N205 404 aa16.47■□□□□ 0.23
CCS-209ENST00000534763 ZNF784Q8NCA9 323 aaPredicted RBP16.47■□□□□ 0.23
CCS-209ENST00000534763 LINS1Q8NG48 757 aa16.47■□□□□ 0.23
CCS-209ENST00000534763 CDHR2Q9BYE9 1310 aa16.46■□□□□ 0.23
CCS-209ENST00000534763 BBOX1O75936 387 aa16.46■□□□□ 0.23
CCS-209ENST00000534763 HNRNPUQ00839 825 aaKnown RBP eCLIP16.46■□□□□ 0.23
CCS-209ENST00000534763 TMC4Q7Z404 712 aa16.46■□□□□ 0.23
CCS-209ENST00000534763 PTPRCP08575 1304 aa16.45■□□□□ 0.22
CCS-209ENST00000534763 SLX4Q8IY92 1834 aa16.45■□□□□ 0.22
CCS-209ENST00000534763 BRPF1P55201 1214 aaPredicted RBP16.45■□□□□ 0.22
CCS-209ENST00000534763 C9orf131Q5VYM1 1079 aa16.45■□□□□ 0.22
CCS-209ENST00000534763 DDX46Q7L014 1031 aaKnown RBP16.45■□□□□ 0.22
CCS-209ENST00000534763 MRPL50Q8N5N7 158 aaKnown RBP16.45■□□□□ 0.22
CCS-209ENST00000534763 TAOK3Q9H2K8 898 aa16.45■□□□□ 0.22
CCS-209ENST00000534763 H7C1W4 665 aa16.44■□□□□ 0.22
CCS-209ENST00000534763 PDE8AO60658 829 aa16.44■□□□□ 0.22
CCS-209ENST00000534763 GCKRQ14397 625 aa16.44■□□□□ 0.22
CCS-209ENST00000534763 SSH1Q8WYL5 1049 aa16.44■□□□□ 0.22
CCS-209ENST00000534763 SNED1Q8TER0 1413 aa16.44■□□□□ 0.22
CCS-209ENST00000534763 ABCC4O15439 1325 aa16.44■□□□□ 0.22
CCS-209ENST00000534763 ZBED9Q6R2W3 1325 aa16.44■□□□□ 0.22
CCS-209ENST00000534763 PPEF1O14829 653 aaPredicted RBP16.43■□□□□ 0.22
CCS-209ENST00000534763 GRAPQ13588 217 aa16.43■□□□□ 0.22
CCS-209ENST00000534763 CWF19L2Q2TBE0 894 aaKnown RBP16.43■□□□□ 0.22
CCS-209ENST00000534763 BEND3Q5T5X7 828 aa16.43■□□□□ 0.22
CCS-209ENST00000534763 GRAPLQ8TC17 118 aaPredicted RBP16.43■□□□□ 0.22
CCS-209ENST00000534763 PSMD1Q99460 953 aa16.43■□□□□ 0.22
CCS-209ENST00000534763 RNF181Q9P0P0 153 aa16.43■□□□□ 0.22
CCS-209ENST00000534763 ATP6V0A2Q9Y487 856 aa16.43■□□□□ 0.22
CCS-209ENST00000534763 DDX60Q8IY21 1712 aaKnown RBP16.42■□□□□ 0.22
CCS-209ENST00000534763 LAMB2P55268 1798 aa16.42■□□□□ 0.22
CCS-209ENST00000534763 FKBP4Q02790 459 aaKnown RBP eCLIP16.42■□□□□ 0.22
CCS-209ENST00000534763 RASSF7Q02833 373 aa16.42■□□□□ 0.22
CCS-209ENST00000534763 SP8Q8IXZ3 490 aa16.42■□□□□ 0.22
CCS-209ENST00000534763 TMX4Q9H1E5 349 aaPredicted RBP16.42■□□□□ 0.22
CCS-209ENST00000534763 ZNF219Q9P2Y4 722 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms