RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 SLC52A2Q9HAB3 445 aa10.76□□□□□ -0.69
SORL1-213ENST00000534754 ERVV-2B6SEH9 535 aa10.75□□□□□ -0.69
SORL1-213ENST00000534754 NEK4P51957 841 aa10.75□□□□□ -0.69
SORL1-213ENST00000534754 FAM184AQ8NB25 1140 aa10.75□□□□□ -0.69
SORL1-213ENST00000534754 RTF1Q92541 710 aaKnown RBP10.75□□□□□ -0.69
SORL1-213ENST00000534754 PRIMPOLQ96LW4 560 aa10.75□□□□□ -0.69
SORL1-213ENST00000534754 NUP188Q5SRE5 1749 aa10.75□□□□□ -0.69
SORL1-213ENST00000534754 TUBGCP6Q96RT7 1819 aa10.75□□□□□ -0.69
SORL1-213ENST00000534754 SMARCA5O60264 1052 aaPredicted RBP10.74□□□□□ -0.69
SORL1-213ENST00000534754 HMGN5P82970 282 aaKnown RBP10.74□□□□□ -0.69
SORL1-213ENST00000534754 CUL4AQ13619 759 aa10.74□□□□□ -0.69
SORL1-213ENST00000534754 DNTTIP2Q5QJE6 756 aaKnown RBP10.74□□□□□ -0.69
SORL1-213ENST00000534754 ARID3AQ99856 593 aa10.74□□□□□ -0.69
SORL1-213ENST00000534754 CABP4P57796 275 aa10.74□□□□□ -0.69
SORL1-213ENST00000534754 UVSSAQ2YD98 709 aa10.74□□□□□ -0.69
SORL1-213ENST00000534754 INTS4Q96HW7 963 aaKnown RBP10.74□□□□□ -0.69
SORL1-213ENST00000534754 TMOD3Q9NYL9 352 aa10.74□□□□□ -0.69
SORL1-213ENST00000534754 MIS18AQ9NYP9 233 aa10.74□□□□□ -0.69
SORL1-213ENST00000534754 APBB1O00213 710 aa10.73□□□□□ -0.69
SORL1-213ENST00000534754 MCCP23508 829 aa10.73□□□□□ -0.69
SORL1-213ENST00000534754 PIBF1Q8WXW3 757 aa10.73□□□□□ -0.69
SORL1-213ENST00000534754 KCNQ3O43525 872 aa10.73□□□□□ -0.69
SORL1-213ENST00000534754 HMMRO75330 724 aa10.73□□□□□ -0.69
SORL1-213ENST00000534754 TEFQ10587 303 aa10.73□□□□□ -0.69
SORL1-213ENST00000534754 SLC39A6Q13433 755 aa10.73□□□□□ -0.69
SORL1-213ENST00000534754 BCL11BQ9C0K0 894 aaPredicted RBP10.73□□□□□ -0.69
SORL1-213ENST00000534754 OSBPL3Q9H4L5 887 aa10.73□□□□□ -0.69
SORL1-213ENST00000534754 ASAP1Q9ULH1 1129 aa10.73□□□□□ -0.69
SORL1-213ENST00000534754 UTP14CQ5TAP6 766 aaKnown RBP10.72□□□□□ -0.69
SORL1-213ENST00000534754 GTF2F1P35269 517 aaKnown RBP eCLIP10.72□□□□□ -0.69
SORL1-213ENST00000534754 ANAPC15P60006 121 aa10.72□□□□□ -0.69
SORL1-213ENST00000534754 ATG3Q9NT62 314 aa10.72□□□□□ -0.69
SORL1-213ENST00000534754 PDE1AP54750 535 aa10.71□□□□□ -0.69
SORL1-213ENST00000534754 DMTNQ08495 405 aa10.71□□□□□ -0.69
SORL1-213ENST00000534754 NOLC1Q14978 699 aaKnown RBP eCLIP10.71□□□□□ -0.69
SORL1-213ENST00000534754 CACNA1FO60840 1977 aa10.71□□□□□ -0.7
SORL1-213ENST00000534754 PTPRCP08575 1304 aa10.71□□□□□ -0.7
SORL1-213ENST00000534754 UBR3Q6ZT12 1888 aa10.71□□□□□ -0.7
SORL1-213ENST00000534754 PALLDQ8WX93 1383 aa10.71□□□□□ -0.7
SORL1-213ENST00000534754 TAF7Q15545 349 aaPredicted RBP10.7□□□□□ -0.7
SORL1-213ENST00000534754 PRDM10Q9NQV6 1147 aa10.7□□□□□ -0.7
SORL1-213ENST00000534754 WDR33Q9C0J8 1336 aaKnown RBP10.7□□□□□ -0.7
SORL1-213ENST00000534754 C4BP0C0L5 1744 aa10.7□□□□□ -0.7
SORL1-213ENST00000534754 BTBD11A6QL63 1104 aa10.7□□□□□ -0.7
SORL1-213ENST00000534754 CHL1O00533 1208 aa10.7□□□□□ -0.7
SORL1-213ENST00000534754 SLC4A9Q96Q91 983 aa10.7□□□□□ -0.7
SORL1-213ENST00000534754 MEIS3Q99687 375 aa10.7□□□□□ -0.7
SORL1-213ENST00000534754 ESYT1Q9BSJ8 1104 aa10.7□□□□□ -0.7
SORL1-213ENST00000534754 LETM1O95202 739 aaPredicted RBP10.69□□□□□ -0.7
SORL1-213ENST00000534754 CCDC183Q5T5S1 534 aa10.69□□□□□ -0.7
SORL1-213ENST00000534754 ZNF790Q6PG37 636 aa10.69□□□□□ -0.7
SORL1-213ENST00000534754 USP48Q86UV5 1035 aa10.69□□□□□ -0.7
SORL1-213ENST00000534754 UPF1Q92900 1129 aaKnown RBP eCLIP10.69□□□□□ -0.7
SORL1-213ENST00000534754 GADD45BO75293 160 aaPredicted RBP10.69□□□□□ -0.7
SORL1-213ENST00000534754 KCNQ4P56696 695 aa10.69□□□□□ -0.7
SORL1-213ENST00000534754 KRT24Q2M2I5 525 aa10.69□□□□□ -0.7
SORL1-213ENST00000534754 DEFB132Q7Z7B7 95 aa10.69□□□□□ -0.7
SORL1-213ENST00000534754 ZNF710Q8N1W2 664 aa10.69□□□□□ -0.7
SORL1-213ENST00000534754 ZNF496Q96IT1 587 aaPredicted RBP10.69□□□□□ -0.7
SORL1-213ENST00000534754 SPTLC3Q9NUV7 552 aa10.69□□□□□ -0.7
SORL1-213ENST00000534754 USP25Q9UHP3 1055 aa10.69□□□□□ -0.7
SORL1-213ENST00000534754 KIF3AQ9Y496 699 aa10.69□□□□□ -0.7
SORL1-213ENST00000534754 C4AP0C0L4 1744 aa10.68□□□□□ -0.7
SORL1-213ENST00000534754 ADCY5O95622 1261 aa10.68□□□□□ -0.7
SORL1-213ENST00000534754 APBA3O96018 575 aa10.68□□□□□ -0.7
SORL1-213ENST00000534754 ZSCAN20P17040 1043 aaPredicted RBP10.68□□□□□ -0.7
SORL1-213ENST00000534754 FKBP5Q13451 457 aaPredicted RBP10.68□□□□□ -0.7
SORL1-213ENST00000534754 TMEM87AQ8NBN3 555 aa10.68□□□□□ -0.7
SORL1-213ENST00000534754 TSPYL4Q9UJ04 414 aa10.68□□□□□ -0.7
SORL1-213ENST00000534754 HEG1Q9ULI3 1381 aa10.68□□□□□ -0.7
SORL1-213ENST00000534754 TCHHQ07283 1943 aa10.68□□□□□ -0.7
SORL1-213ENST00000534754 PRAMEF22A3QJZ6 481 aa10.68□□□□□ -0.7
SORL1-213ENST00000534754 PTCD1O75127 700 aaKnown RBP10.68□□□□□ -0.7
SORL1-213ENST00000534754 NOL8Q76FK4 1167 aaKnown RBP10.68□□□□□ -0.7
SORL1-213ENST00000534754 PROM2Q8N271 834 aa10.68□□□□□ -0.7
SORL1-213ENST00000534754 IL17RAQ96F46 866 aa10.68□□□□□ -0.7
SORL1-213ENST00000534754 ZNF830Q96NB3 372 aaPredicted RBP10.68□□□□□ -0.7
SORL1-213ENST00000534754 TTC12Q9H892 705 aaPredicted RBP10.68□□□□□ -0.7
SORL1-213ENST00000534754 GDPD2Q9HCC8 539 aa10.68□□□□□ -0.7
SORL1-213ENST00000534754 QSER1Q2KHR3 1735 aa10.67□□□□□ -0.7
SORL1-213ENST00000534754 EN1Q05925 392 aaPredicted RBP10.67□□□□□ -0.7
SORL1-213ENST00000534754 ANO2Q9NQ90 1003 aa10.67□□□□□ -0.7
SORL1-213ENST00000534754 PALD1Q9ULE6 856 aa10.67□□□□□ -0.7
SORL1-213ENST00000534754 MX1P20591 662 aa10.66□□□□□ -0.7
SORL1-213ENST00000534754 EIF4A1P60842 406 aaKnown RBP10.66□□□□□ -0.7
SORL1-213ENST00000534754 FOXD4L6Q3SYB3 417 aaPredicted RBP10.66□□□□□ -0.7
SORL1-213ENST00000534754 FOXD4L3Q6VB84 417 aaPredicted RBP10.66□□□□□ -0.7
SORL1-213ENST00000534754 KLHL34Q8N239 644 aa10.66□□□□□ -0.7
SORL1-213ENST00000534754 MPNDQ8N594 471 aa10.66□□□□□ -0.7
SORL1-213ENST00000534754 TSC1Q92574 1164 aa10.66□□□□□ -0.7
SORL1-213ENST00000534754 GTPBP4Q9BZE4 634 aaKnown RBP10.66□□□□□ -0.7
SORL1-213ENST00000534754 LRRC4BQ9NT99 713 aa10.66□□□□□ -0.7
SORL1-213ENST00000534754 ZHX1Q9UKY1 873 aaPredicted RBP10.66□□□□□ -0.7
SORL1-213ENST00000534754 LOC102724428A0A0B4J2F2 783 aa10.66□□□□□ -0.7
SORL1-213ENST00000534754 PLSCR1O15162 318 aa10.66□□□□□ -0.7
SORL1-213ENST00000534754 CHMLP26374 656 aa10.66□□□□□ -0.7
SORL1-213ENST00000534754 SIK1P57059 783 aa10.66□□□□□ -0.7
SORL1-213ENST00000534754 ITPK1Q13572 414 aa10.66□□□□□ -0.7
SORL1-213ENST00000534754 CAMKK2Q96RR4 588 aa10.66□□□□□ -0.7
SORL1-213ENST00000534754 KDM4AO75164 1064 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms