RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 ANXA1P04083 346 aa24.57■■□□□ 1.52
NDUFS3-213ENST00000534716 KRT24Q2M2I5 525 aa24.57■■□□□ 1.52
NDUFS3-213ENST00000534716 HSP90AB3PQ58FF7 597 aa24.57■■□□□ 1.52
NDUFS3-213ENST00000534716 SLC10A5Q5PT55 438 aa24.57■■□□□ 1.52
NDUFS3-213ENST00000534716 CC2D2BQ6DHV5 1058 aa24.57■■□□□ 1.52
NDUFS3-213ENST00000534716 OLFM4Q6UX06 510 aa24.56■■□□□ 1.52
NDUFS3-213ENST00000534716 CRAMP1Q96RY5 1269 aa24.56■■□□□ 1.52
NDUFS3-213ENST00000534716 PSMD1Q99460 953 aa24.56■■□□□ 1.52
NDUFS3-213ENST00000534716 LAS1LQ9Y4W2 734 aaKnown RBP24.56■■□□□ 1.52
NDUFS3-213ENST00000534716 ZNF853P0CG23 659 aa24.55■■□□□ 1.52
NDUFS3-213ENST00000534716 GRIPAP1Q4V328 841 aa24.55■■□□□ 1.52
NDUFS3-213ENST00000534716 XAGE3Q8WTP9 111 aa24.55■■□□□ 1.52
NDUFS3-213ENST00000534716 NECTIN2Q92692 538 aa24.55■■□□□ 1.52
NDUFS3-213ENST00000534716 RPGRQ92834 1020 aaKnown RBP24.55■■□□□ 1.52
NDUFS3-213ENST00000534716 UTP14AQ9BVJ6 771 aaKnown RBP24.55■■□□□ 1.52
NDUFS3-213ENST00000534716 ZNF277Q9NRM2 450 aaPredicted RBP24.54■■□□□ 1.52
NDUFS3-213ENST00000534716 DDNO94850 711 aaPredicted RBP24.53■■□□□ 1.52
NDUFS3-213ENST00000534716 RBM17Q96I25 401 aaKnown RBP24.53■■□□□ 1.52
NDUFS3-213ENST00000534716 L3MBTL3Q96JM7 780 aaPredicted RBP24.53■■□□□ 1.52
NDUFS3-213ENST00000534716 NLRP3Q96P20 1036 aa24.53■■□□□ 1.52
NDUFS3-213ENST00000534716 CHPF2Q9P2E5 772 aa24.53■■□□□ 1.52
NDUFS3-213ENST00000534716 APAF1O14727 1248 aa24.52■■□□□ 1.52
NDUFS3-213ENST00000534716 ZEB1P37275 1124 aaPredicted RBP24.52■■□□□ 1.52
NDUFS3-213ENST00000534716 AIMP1Q12904 312 aaKnown RBP24.52■■□□□ 1.52
NDUFS3-213ENST00000534716 TCIRG1Q13488 830 aa24.52■■□□□ 1.52
NDUFS3-213ENST00000534716 HDGFL1Q5TGJ6 251 aa24.52■■□□□ 1.52
NDUFS3-213ENST00000534716 NLRP10Q86W26 655 aa24.52■■□□□ 1.52
NDUFS3-213ENST00000534716 SYNE4Q8N205 404 aa24.52■■□□□ 1.52
NDUFS3-213ENST00000534716 IARSP41252 1262 aaKnown RBP24.51■■□□□ 1.51
NDUFS3-213ENST00000534716 CALD1Q05682 793 aaKnown RBP24.51■■□□□ 1.51
NDUFS3-213ENST00000534716 C3orf67Q6ZVT6 689 aa24.51■■□□□ 1.51
NDUFS3-213ENST00000534716 MBIPQ9NS73 344 aa24.51■■□□□ 1.51
NDUFS3-213ENST00000534716 IFT57Q9NWB7 429 aa24.51■■□□□ 1.51
NDUFS3-213ENST00000534716 DBF4Q9UBU7 674 aaPredicted RBP24.51■■□□□ 1.51
NDUFS3-213ENST00000534716 FZD9O00144 591 aa24.49■■□□□ 1.51
NDUFS3-213ENST00000534716 DUSP27Q5VZP5 1158 aa24.49■■□□□ 1.51
NDUFS3-213ENST00000534716 PLBD2Q8NHP8 589 aa24.49■■□□□ 1.51
NDUFS3-213ENST00000534716 IQCA1LA6NCM1 817 aa24.48■■□□□ 1.51
NDUFS3-213ENST00000534716 HYPKQ9NX55 129 aa24.48■■□□□ 1.51
NDUFS3-213ENST00000534716 PPEF1O14829 653 aaPredicted RBP24.47■■□□□ 1.51
NDUFS3-213ENST00000534716 GNAI1P63096 354 aa24.47■■□□□ 1.51
NDUFS3-213ENST00000534716 ANKRD13DQ6ZTN6 518 aa24.47■■□□□ 1.51
NDUFS3-213ENST00000534716 KLRG1Q96E93 195 aa24.47■■□□□ 1.51
NDUFS3-213ENST00000534716 ANKRD36CQ5JPF3 1778 aa24.47■■□□□ 1.51
NDUFS3-213ENST00000534716 ZNF541Q9H0D2 1346 aa24.46■■□□□ 1.51
NDUFS3-213ENST00000534716 HTRA3P83110 453 aa24.46■■□□□ 1.51
NDUFS3-213ENST00000534716 TRMT112Q9UI30 125 aaKnown RBP24.46■■□□□ 1.51
NDUFS3-213ENST00000534716 ISCA1Q9BUE6 129 aa24.45■■□□□ 1.5
NDUFS3-213ENST00000534716 ATP6V0A2Q9Y487 856 aa24.45■■□□□ 1.5
NDUFS3-213ENST00000534716 SH3TC1Q8TE82 1336 aa24.44■■□□□ 1.5
NDUFS3-213ENST00000534716 CHADLQ6NUI6 762 aa24.44■■□□□ 1.5
NDUFS3-213ENST00000534716 JMYQ8N9B5 988 aa24.44■■□□□ 1.5
NDUFS3-213ENST00000534716 JDP2Q8WYK2 163 aa24.44■■□□□ 1.5
NDUFS3-213ENST00000534716 ABCC4O15439 1325 aa24.43■■□□□ 1.5
NDUFS3-213ENST00000534716 BBOX1O75936 387 aa24.43■■□□□ 1.5
NDUFS3-213ENST00000534716 TRIM28Q13263 835 aaKnown RBP24.43■■□□□ 1.5
NDUFS3-213ENST00000534716 GPC2Q8N158 579 aa24.43■■□□□ 1.5
NDUFS3-213ENST00000534716 VPS33BQ9H267 617 aa24.43■■□□□ 1.5
NDUFS3-213ENST00000534716 TAF1DQ9H5J8 278 aaPredicted RBP24.43■■□□□ 1.5
NDUFS3-213ENST00000534716 HCLS1P14317 486 aaPredicted RBP24.42■■□□□ 1.5
NDUFS3-213ENST00000534716 SCN4AP35499 1836 aa24.42■■□□□ 1.5
NDUFS3-213ENST00000534716 CAPN15O75808 1086 aa24.41■■□□□ 1.5
NDUFS3-213ENST00000534716 POTEIP0CG38 1075 aa24.41■■□□□ 1.5
NDUFS3-213ENST00000534716 POTEJP0CG39 1038 aa24.41■■□□□ 1.5
NDUFS3-213ENST00000534716 CCDC184Q52MB2 194 aa24.41■■□□□ 1.5
NDUFS3-213ENST00000534716 LDHDQ86WU2 507 aa24.41■■□□□ 1.5
NDUFS3-213ENST00000534716 TMX4Q9H1E5 349 aaPredicted RBP24.41■■□□□ 1.5
NDUFS3-213ENST00000534716 COL4A5P29400 1685 aa24.4■■□□□ 1.5
NDUFS3-213ENST00000534716 CCDC27Q2M243 656 aa24.4■■□□□ 1.5
NDUFS3-213ENST00000534716 NCBP3Q53F19 620 aaKnown RBP24.4■■□□□ 1.5
NDUFS3-213ENST00000534716 SLC51AQ86UW1 340 aa24.4■■□□□ 1.5
NDUFS3-213ENST00000534716 SP8Q8IXZ3 490 aa24.4■■□□□ 1.5
NDUFS3-213ENST00000534716 RTFDC1Q9BY42 306 aaPredicted RBP24.4■■□□□ 1.5
NDUFS3-213ENST00000534716 CHMP4AQ9BY43 222 aa24.4■■□□□ 1.5
NDUFS3-213ENST00000534716 HACL1Q9UJ83 578 aa24.4■■□□□ 1.5
NDUFS3-213ENST00000534716 DDX46Q7L014 1031 aaKnown RBP24.39■■□□□ 1.49
NDUFS3-213ENST00000534716 PCNTO95613 3336 aa24.39■■□□□ 1.49
NDUFS3-213ENST00000534716 TCERG1O14776 1098 aaKnown RBP24.38■■□□□ 1.49
NDUFS3-213ENST00000534716 EIF6P56537 245 aaKnown RBP24.38■■□□□ 1.49
NDUFS3-213ENST00000534716 GRAPQ13588 217 aa24.38■■□□□ 1.49
NDUFS3-213ENST00000534716 LARGE2Q8N3Y3 721 aa24.38■■□□□ 1.49
NDUFS3-213ENST00000534716 GRAPLQ8TC17 118 aaPredicted RBP24.38■■□□□ 1.49
NDUFS3-213ENST00000534716 TMC4Q7Z404 712 aa24.37■■□□□ 1.49
NDUFS3-213ENST00000534716 C8orf58Q8NAV2 365 aa24.37■■□□□ 1.49
NDUFS3-213ENST00000534716 EPHX2P34913 555 aa24.36■■□□□ 1.49
NDUFS3-213ENST00000534716 SF3B3Q15393 1217 aaKnown RBP24.36■■□□□ 1.49
NDUFS3-213ENST00000534716 PNMA8AQ86V59 439 aaPredicted RBP24.36■■□□□ 1.49
NDUFS3-213ENST00000534716 SUPT20HQ8NEM7 779 aa24.36■■□□□ 1.49
NDUFS3-213ENST00000534716 FAM89AQ96GI7 184 aa24.36■■□□□ 1.49
NDUFS3-213ENST00000534716 LAMB2P55268 1798 aa24.36■■□□□ 1.49
NDUFS3-213ENST00000534716 ATP5J2-PTCD1G3V325 749 aa24.35■■□□□ 1.49
NDUFS3-213ENST00000534716 ELL2O00472 640 aaPredicted RBP24.35■■□□□ 1.49
NDUFS3-213ENST00000534716 GOLGA2Q08379 1002 aa24.35■■□□□ 1.49
NDUFS3-213ENST00000534716 COL13A1Q5TAT6 717 aaPredicted RBP24.35■■□□□ 1.49
NDUFS3-213ENST00000534716 PHAXQ9H814 394 aaKnown RBP24.35■■□□□ 1.49
NDUFS3-213ENST00000534716 PASKQ96RG2 1323 aa24.35■■□□□ 1.49
NDUFS3-213ENST00000534716 ZNF316A6NFI3 1004 aaPredicted RBP24.34■■□□□ 1.49
NDUFS3-213ENST00000534716 CCDC30Q5VVM6 783 aa24.34■■□□□ 1.49
NDUFS3-213ENST00000534716 RIC3Q7Z5B4 369 aa24.34■■□□□ 1.49
NDUFS3-213ENST00000534716 CREBZFQ9NS37 354 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms