RNA–Protein interactions for RNA: ENST00000534557.1

VPS51-215, Transcript of VPS51, GARP complex subunit, humanhuman

APPRIS ALT2 TSL 3

Gene VPS51, Length 854 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-215ENST00000534557 XAGE3Q8WTP9 111 aa23.84■■□□□ 1.41
VPS51-215ENST00000534557 CFAP44Q96MT7 982 aa23.84■■□□□ 1.41
VPS51-215ENST00000534557 CRAMP1Q96RY5 1269 aa23.84■■□□□ 1.41
VPS51-215ENST00000534557 RNF123Q5XPI4 1314 aa23.84■■□□□ 1.41
VPS51-215ENST00000534557 CCDC88AQ3V6T2 1871 aa23.83■■□□□ 1.41
VPS51-215ENST00000534557 NTSR2O95665 410 aa23.83■■□□□ 1.41
VPS51-215ENST00000534557 ANXA1P04083 346 aa23.83■■□□□ 1.41
VPS51-215ENST00000534557 ZEB1P37275 1124 aaPredicted RBP23.83■■□□□ 1.41
VPS51-215ENST00000534557 IARSP41252 1262 aaKnown RBP23.83■■□□□ 1.41
VPS51-215ENST00000534557 HDGFL1Q5TGJ6 251 aa23.83■■□□□ 1.41
VPS51-215ENST00000534557 PSMD1Q99460 953 aa23.83■■□□□ 1.41
VPS51-215ENST00000534557 ABCC12Q96J65 1359 aa23.82■■□□□ 1.4
VPS51-215ENST00000534557 PROSER3Q2NL68 480 aa23.82■■□□□ 1.4
VPS51-215ENST00000534557 LRP10Q7Z4F1 713 aa23.82■■□□□ 1.4
VPS51-215ENST00000534557 CHMP4AQ9BY43 222 aa23.82■■□□□ 1.4
VPS51-215ENST00000534557 DBF4Q9UBU7 674 aaPredicted RBP23.82■■□□□ 1.4
VPS51-215ENST00000534557 POTECB2RU33 542 aa23.81■■□□□ 1.4
VPS51-215ENST00000534557 SLC10A5Q5PT55 438 aa23.81■■□□□ 1.4
VPS51-215ENST00000534557 RIC1Q4ADV7 1423 aa23.81■■□□□ 1.4
VPS51-215ENST00000534557 NUP98P52948 1817 aa23.8■■□□□ 1.4
VPS51-215ENST00000534557 TCIRG1Q13488 830 aa23.8■■□□□ 1.4
VPS51-215ENST00000534557 OLFM4Q6UX06 510 aa23.8■■□□□ 1.4
VPS51-215ENST00000534557 TIAM2Q8IVF5 1701 aa23.8■■□□□ 1.4
VPS51-215ENST00000534557 KLRG1Q96E93 195 aa23.8■■□□□ 1.4
VPS51-215ENST00000534557 TRMT112Q9UI30 125 aaKnown RBP23.8■■□□□ 1.4
VPS51-215ENST00000534557 PPEF1O14829 653 aaPredicted RBP23.79■■□□□ 1.4
VPS51-215ENST00000534557 CHADLQ6NUI6 762 aa23.79■■□□□ 1.4
VPS51-215ENST00000534557 HYPKQ9NX55 129 aa23.79■■□□□ 1.4
VPS51-215ENST00000534557 CHPF2Q9P2E5 772 aa23.79■■□□□ 1.4
VPS51-215ENST00000534557 ARFGEF2Q9Y6D5 1785 aa23.78■■□□□ 1.4
VPS51-215ENST00000534557 APAF1O14727 1248 aa23.78■■□□□ 1.4
VPS51-215ENST00000534557 EIF6P56537 245 aaKnown RBP23.78■■□□□ 1.4
VPS51-215ENST00000534557 GNAI1P63096 354 aa23.78■■□□□ 1.4
VPS51-215ENST00000534557 ANKRD13DQ6ZTN6 518 aa23.78■■□□□ 1.4
VPS51-215ENST00000534557 L3MBTL3Q96JM7 780 aaPredicted RBP23.78■■□□□ 1.4
VPS51-215ENST00000534557 DICER1Q9UPY3 1922 aaKnown RBP23.77■■□□□ 1.4
VPS51-215ENST00000534557 WDR90Q96KV7 1748 aa23.77■■□□□ 1.4
VPS51-215ENST00000534557 TCERG1O14776 1098 aaKnown RBP23.77■■□□□ 1.4
VPS51-215ENST00000534557 BBOX1O75936 387 aa23.77■■□□□ 1.4
VPS51-215ENST00000534557 HTRA3P83110 453 aa23.77■■□□□ 1.4
VPS51-215ENST00000534557 KRT24Q2M2I5 525 aa23.77■■□□□ 1.4
VPS51-215ENST00000534557 DUSP27Q5VZP5 1158 aa23.77■■□□□ 1.4
VPS51-215ENST00000534557 NLRP10Q86W26 655 aa23.77■■□□□ 1.4
VPS51-215ENST00000534557 PLBD2Q8NHP8 589 aa23.77■■□□□ 1.4
VPS51-215ENST00000534557 CACNA1SQ13698 1873 aa23.77■■□□□ 1.4
VPS51-215ENST00000534557 DDX46Q7L014 1031 aaKnown RBP23.76■■□□□ 1.39
VPS51-215ENST00000534557 LARGE2Q8N3Y3 721 aa23.76■■□□□ 1.39
VPS51-215ENST00000534557 IFT57Q9NWB7 429 aa23.76■■□□□ 1.39
VPS51-215ENST00000534557 HACL1Q9UJ83 578 aa23.76■■□□□ 1.39
VPS51-215ENST00000534557 SH3TC1Q8TE82 1336 aa23.76■■□□□ 1.39
VPS51-215ENST00000534557 FZD9O00144 591 aa23.75■■□□□ 1.39
VPS51-215ENST00000534557 PNMA8AQ86V59 439 aaPredicted RBP23.75■■□□□ 1.39
VPS51-215ENST00000534557 LDHDQ86WU2 507 aa23.75■■□□□ 1.39
VPS51-215ENST00000534557 GPC2Q8N158 579 aa23.75■■□□□ 1.39
VPS51-215ENST00000534557 SUPT20HQ8NEM7 779 aa23.75■■□□□ 1.39
VPS51-215ENST00000534557 VPS33BQ9H267 617 aa23.74■■□□□ 1.39
VPS51-215ENST00000534557 TAF1DQ9H5J8 278 aaPredicted RBP23.74■■□□□ 1.39
VPS51-215ENST00000534557 MBIPQ9NS73 344 aa23.74■■□□□ 1.39
VPS51-215ENST00000534557 CLEC11AQ9Y240 323 aa23.74■■□□□ 1.39
VPS51-215ENST00000534557 HCLS1P14317 486 aaPredicted RBP23.73■■□□□ 1.39
VPS51-215ENST00000534557 EAPPQ56P03 285 aaPredicted RBP23.73■■□□□ 1.39
VPS51-215ENST00000534557 ATP6V0A2Q9Y487 856 aa23.73■■□□□ 1.39
VPS51-215ENST00000534557 LMOD1P29536 600 aaPredicted RBP23.72■■□□□ 1.39
VPS51-215ENST00000534557 ZNF541Q9H0D2 1346 aa23.71■■□□□ 1.39
VPS51-215ENST00000534557 HSP90B1P14625 803 aaKnown RBP23.71■■□□□ 1.39
VPS51-215ENST00000534557 EPHX2P34913 555 aa23.71■■□□□ 1.39
VPS51-215ENST00000534557 RIC3Q7Z5B4 369 aa23.71■■□□□ 1.39
VPS51-215ENST00000534557 NIM1KQ8IY84 436 aa23.71■■□□□ 1.39
VPS51-215ENST00000534557 JMYQ8N9B5 988 aa23.71■■□□□ 1.39
VPS51-215ENST00000534557 GJA3Q9Y6H8 435 aa23.71■■□□□ 1.39
VPS51-215ENST00000534557 ZNF853P0CG23 659 aa23.7■■□□□ 1.38
VPS51-215ENST00000534557 GOLGA2Q08379 1002 aa23.7■■□□□ 1.38
VPS51-215ENST00000534557 C3orf67Q6ZVT6 689 aa23.7■■□□□ 1.38
VPS51-215ENST00000534557 TMC4Q7Z404 712 aa23.7■■□□□ 1.38
VPS51-215ENST00000534557 SP8Q8IXZ3 490 aa23.7■■□□□ 1.38
VPS51-215ENST00000534557 ABCC4O15439 1325 aa23.69■■□□□ 1.38
VPS51-215ENST00000534557 PPIP5K2O43314 1243 aa23.69■■□□□ 1.38
VPS51-215ENST00000534557 DPP8Q6V1X1 898 aaPredicted RBP23.69■■□□□ 1.38
VPS51-215ENST00000534557 IFFO2Q5TF58 517 aa23.68■■□□□ 1.38
VPS51-215ENST00000534557 MPNDQ8N594 471 aa23.68■■□□□ 1.38
VPS51-215ENST00000534557 CREBZFQ9NS37 354 aa23.68■■□□□ 1.38
VPS51-215ENST00000534557 ELL2O00472 640 aaPredicted RBP23.67■■□□□ 1.38
VPS51-215ENST00000534557 GRAPQ13588 217 aa23.67■■□□□ 1.38
VPS51-215ENST00000534557 CCDC30Q5VVM6 783 aa23.67■■□□□ 1.38
VPS51-215ENST00000534557 GRAPLQ8TC17 118 aaPredicted RBP23.67■■□□□ 1.38
VPS51-215ENST00000534557 ATP5J2-PTCD1G3V325 749 aa23.66■■□□□ 1.38
VPS51-215ENST00000534557 DDX58O95786 925 aaKnown RBP23.66■■□□□ 1.38
VPS51-215ENST00000534557 POTEIP0CG38 1075 aa23.66■■□□□ 1.38
VPS51-215ENST00000534557 POTEJP0CG39 1038 aa23.66■■□□□ 1.38
VPS51-215ENST00000534557 TRIM28Q13263 835 aaKnown RBP23.66■■□□□ 1.38
VPS51-215ENST00000534557 ISCA1Q9BUE6 129 aa23.66■■□□□ 1.38
VPS51-215ENST00000534557 FAM89AQ96GI7 184 aa23.65■■□□□ 1.38
VPS51-215ENST00000534557 SCN4AP35499 1836 aa23.64■■□□□ 1.38
VPS51-215ENST00000534557 ANP32CO43423 234 aa23.64■■□□□ 1.37
VPS51-215ENST00000534557 AOC3Q16853 763 aa23.64■■□□□ 1.37
VPS51-215ENST00000534557 RTFDC1Q9BY42 306 aaPredicted RBP23.64■■□□□ 1.37
VPS51-215ENST00000534557 ZNRF3Q9ULT6 936 aa23.64■■□□□ 1.37
VPS51-215ENST00000534557 SNED1Q8TER0 1413 aa23.63■■□□□ 1.37
VPS51-215ENST00000534557 SF3B3Q15393 1217 aaKnown RBP23.62■■□□□ 1.37
VPS51-215ENST00000534557 IRS4O14654 1257 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms