RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	ISCA1	Q9BUE6	129 aa		18.65	■□□□□ 0.58
CTSB-231	ENST00000534382	RNF123	Q5XPI4	1314 aa		18.65	■□□□□ 0.58
CTSB-231	ENST00000534382	ARFGEF1	Q9Y6D6	1849 aa		18.65	■□□□□ 0.58
CTSB-231	ENST00000534382		E9PSI1	815 aa		18.64	■□□□□ 0.57
CTSB-231	ENST00000534382	ATP5J2-PTCD1	G3V325	749 aa		18.64	■□□□□ 0.57
CTSB-231	ENST00000534382	TRIM28	Q13263	835 aa	Known RBP	18.64	■□□□□ 0.57
CTSB-231	ENST00000534382	SLC10A5	Q5PT55	438 aa		18.64	■□□□□ 0.57
CTSB-231	ENST00000534382	TRMT112	Q9UI30	125 aa	Known RBP	18.64	■□□□□ 0.57
CTSB-231	ENST00000534382	RIC1	Q4ADV7	1423 aa		18.64	■□□□□ 0.57
CTSB-231	ENST00000534382	CRY2	Q49AN0	593 aa		18.63	■□□□□ 0.57
CTSB-231	ENST00000534382	COL11A2	P13942	1736 aa	Predicted RBP	18.63	■□□□□ 0.57
CTSB-231	ENST00000534382	SLFN5	Q08AF3	891 aa		18.62	■□□□□ 0.57
CTSB-231	ENST00000534382	PRPF40B	Q6NWY9	871 aa	Known RBP	18.62	■□□□□ 0.57
CTSB-231	ENST00000534382	KSR2	Q6VAB6	950 aa		18.62	■□□□□ 0.57
CTSB-231	ENST00000534382	G2E3	Q7L622	706 aa		18.62	■□□□□ 0.57
CTSB-231	ENST00000534382	ZNF784	Q8NCA9	323 aa	Predicted RBP	18.62	■□□□□ 0.57
CTSB-231	ENST00000534382	ANKRD36C	Q5JPF3	1778 aa		18.62	■□□□□ 0.57
CTSB-231	ENST00000534382	SH3TC1	Q8TE82	1336 aa		18.61	■□□□□ 0.57
CTSB-231	ENST00000534382	PI4KAP2	A4QPH2	592 aa		18.61	■□□□□ 0.57
CTSB-231	ENST00000534382	C21orf2	O43822	256 aa		18.61	■□□□□ 0.57
CTSB-231	ENST00000534382	ALDH1B1	P30837	517 aa		18.61	■□□□□ 0.57
CTSB-231	ENST00000534382	SYNE4	Q8N205	404 aa		18.61	■□□□□ 0.57
CTSB-231	ENST00000534382	PI4KAP1	Q8N8J0	262 aa		18.61	■□□□□ 0.57
CTSB-231	ENST00000534382	NLRP3	Q96P20	1036 aa		18.61	■□□□□ 0.57
CTSB-231	ENST00000534382	MYD88	Q99836	296 aa		18.61	■□□□□ 0.57
CTSB-231	ENST00000534382	METTL22	Q9BUU2	404 aa	Predicted RBP	18.61	■□□□□ 0.57
CTSB-231	ENST00000534382	MAP3K2	Q9Y2U5	619 aa		18.61	■□□□□ 0.57
CTSB-231	ENST00000534382	FLII	Q13045	1269 aa		18.6	■□□□□ 0.57
CTSB-231	ENST00000534382	ZNF428	Q96B54	188 aa		18.6	■□□□□ 0.57
CTSB-231	ENST00000534382	ZNF219	Q9P2Y4	722 aa	Predicted RBP	18.6	■□□□□ 0.57
CTSB-231	ENST00000534382	HCLS1	P14317	486 aa	Predicted RBP	18.59	■□□□□ 0.57
CTSB-231	ENST00000534382	HOXA10	P31260	410 aa	Predicted RBP	18.59	■□□□□ 0.57
CTSB-231	ENST00000534382	C3orf67	Q6ZVT6	689 aa		18.59	■□□□□ 0.57
CTSB-231	ENST00000534382	CCDC191	Q8NCU4	936 aa		18.59	■□□□□ 0.57
CTSB-231	ENST00000534382	C7orf43	Q8WVR3	580 aa		18.59	■□□□□ 0.57
CTSB-231	ENST00000534382	RPGR	Q92834	1020 aa	Known RBP	18.59	■□□□□ 0.57
CTSB-231	ENST00000534382	CDCA7L	Q96GN5	454 aa		18.59	■□□□□ 0.57
CTSB-231	ENST00000534382	ARFGEF2	Q9Y6D5	1785 aa		18.58	■□□□□ 0.57
CTSB-231	ENST00000534382	TNRC6C	Q9HCJ0	1690 aa	Known RBP	18.58	■□□□□ 0.57
CTSB-231	ENST00000534382	SOGA3	Q5TF21	947 aa		18.58	■□□□□ 0.56
CTSB-231	ENST00000534382	FAM89A	Q96GI7	184 aa		18.58	■□□□□ 0.56
CTSB-231	ENST00000534382	RBM17	Q96I25	401 aa	Known RBP	18.58	■□□□□ 0.56
CTSB-231	ENST00000534382	ADCY9	O60503	1353 aa		18.57	■□□□□ 0.56
CTSB-231	ENST00000534382	RASSF7	Q02833	373 aa		18.57	■□□□□ 0.56
CTSB-231	ENST00000534382	FKBP5	Q13451	457 aa	Predicted RBP	18.57	■□□□□ 0.56
CTSB-231	ENST00000534382	C9orf131	Q5VYM1	1079 aa		18.57	■□□□□ 0.56
CTSB-231	ENST00000534382	TRMT2A	Q8IZ69	625 aa	Known RBP	18.57	■□□□□ 0.56
CTSB-231	ENST00000534382	CRAMP1	Q96RY5	1269 aa		18.57	■□□□□ 0.56
CTSB-231	ENST00000534382	SLX4	Q8IY92	1834 aa		18.57	■□□□□ 0.56
CTSB-231	ENST00000534382	NFKBIE	O00221	500 aa		18.56	■□□□□ 0.56
CTSB-231	ENST00000534382	NEXN	Q0ZGT2	675 aa		18.56	■□□□□ 0.56
CTSB-231	ENST00000534382	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.56	■□□□□ 0.56
CTSB-231	ENST00000534382	CWC25	Q9NXE8	425 aa	Predicted RBP	18.56	■□□□□ 0.56
CTSB-231	ENST00000534382	RNF181	Q9P0P0	153 aa		18.56	■□□□□ 0.56
CTSB-231	ENST00000534382	CCDC93	Q567U6	631 aa		18.55	■□□□□ 0.56
CTSB-231	ENST00000534382	RTL5	Q5HYW3	569 aa	Predicted RBP	18.55	■□□□□ 0.56
CTSB-231	ENST00000534382	CACNA1F	O60840	1977 aa		18.54	■□□□□ 0.56
CTSB-231	ENST00000534382	IRS4	O14654	1257 aa	Predicted RBP	18.54	■□□□□ 0.56
CTSB-231	ENST00000534382	PCCA	P05165	728 aa	Predicted RBP	18.54	■□□□□ 0.56
CTSB-231	ENST00000534382	IGKV5-2	P06315	115 aa		18.54	■□□□□ 0.56
CTSB-231	ENST00000534382	LMNB1	P20700	586 aa		18.54	■□□□□ 0.56
CTSB-231	ENST00000534382	DNAAF4	Q8WXU2	420 aa		18.54	■□□□□ 0.56
CTSB-231	ENST00000534382	LTBP3	Q9NS15	1303 aa		18.53	■□□□□ 0.56
CTSB-231	ENST00000534382	HSP90B1	P14625	803 aa	Known RBP	18.53	■□□□□ 0.56
CTSB-231	ENST00000534382	PRELP	P51888	382 aa		18.53	■□□□□ 0.56
CTSB-231	ENST00000534382	NEURL1B	A8MQ27	555 aa		18.52	■□□□□ 0.56
CTSB-231	ENST00000534382	SF3B3	Q15393	1217 aa	Known RBP	18.52	■□□□□ 0.56
CTSB-231	ENST00000534382	CWF19L2	Q2TBE0	894 aa	Known RBP	18.52	■□□□□ 0.56
CTSB-231	ENST00000534382	OLFM4	Q6UX06	510 aa		18.52	■□□□□ 0.56
CTSB-231	ENST00000534382	DDX46	Q7L014	1031 aa	Known RBP	18.52	■□□□□ 0.56
CTSB-231	ENST00000534382	RTKN2	Q8IZC4	609 aa		18.52	■□□□□ 0.56
CTSB-231	ENST00000534382	TAOK3	Q9H2K8	898 aa		18.52	■□□□□ 0.56
CTSB-231	ENST00000534382	CACNA1S	Q13698	1873 aa		18.52	■□□□□ 0.55
CTSB-231	ENST00000534382	PPEF1	O14829	653 aa	Predicted RBP	18.51	■□□□□ 0.55
CTSB-231	ENST00000534382	HNRNPU	Q00839	825 aa	Known RBP eCLIP	18.51	■□□□□ 0.55
CTSB-231	ENST00000534382	CC2D2B	Q6DHV5	1058 aa		18.51	■□□□□ 0.55
CTSB-231	ENST00000534382	ABCC4	O15439	1325 aa		18.5	■□□□□ 0.55
CTSB-231	ENST00000534382	BBOX1	O75936	387 aa		18.5	■□□□□ 0.55
CTSB-231	ENST00000534382	MRPL50	Q8N5N7	158 aa	Known RBP	18.5	■□□□□ 0.55
CTSB-231	ENST00000534382	LINS1	Q8NG48	757 aa		18.5	■□□□□ 0.55
CTSB-231	ENST00000534382	JARID2	Q92833	1246 aa	Predicted RBP	18.5	■□□□□ 0.55
CTSB-231	ENST00000534382	SBF1	O95248	1867 aa		18.5	■□□□□ 0.55
CTSB-231	ENST00000534382	FER1L6	Q2WGJ9	1857 aa		18.5	■□□□□ 0.55
CTSB-231	ENST00000534382		F6X3S4	739 aa		18.49	■□□□□ 0.55
CTSB-231	ENST00000534382	PDE8A	O60658	829 aa		18.49	■□□□□ 0.55
CTSB-231	ENST00000534382	CT47B1	P0C2W7	299 aa	Predicted RBP	18.49	■□□□□ 0.55
CTSB-231	ENST00000534382	FKBP4	Q02790	459 aa	Known RBP eCLIP	18.49	■□□□□ 0.55
CTSB-231	ENST00000534382	GRAP	Q13588	217 aa		18.49	■□□□□ 0.55
CTSB-231	ENST00000534382	GRIPAP1	Q4V328	841 aa		18.49	■□□□□ 0.55
CTSB-231	ENST00000534382	GRAPL	Q8TC17	118 aa	Predicted RBP	18.49	■□□□□ 0.55
CTSB-231	ENST00000534382	ZNF526	Q8TF50	670 aa	Predicted RBP	18.49	■□□□□ 0.55
CTSB-231	ENST00000534382	GPBP1L1	Q9HC44	474 aa	Predicted RBP	18.49	■□□□□ 0.55
CTSB-231	ENST00000534382	CDHR2	Q9BYE9	1310 aa		18.49	■□□□□ 0.55
CTSB-231	ENST00000534382		H7C1W4	665 aa		18.48	■□□□□ 0.55
CTSB-231	ENST00000534382	GCKR	Q14397	625 aa		18.48	■□□□□ 0.55
CTSB-231	ENST00000534382	SSH1	Q8WYL5	1049 aa		18.48	■□□□□ 0.55
CTSB-231	ENST00000534382	TMX4	Q9H1E5	349 aa	Predicted RBP	18.48	■□□□□ 0.55
CTSB-231	ENST00000534382	ATP6V0A2	Q9Y487	856 aa		18.48	■□□□□ 0.55
CTSB-231	ENST00000534382	ZC3H4	Q9UPT8	1303 aa	Known RBP	18.48	■□□□□ 0.55
CTSB-231	ENST00000534382	DDX60	Q8IY21	1712 aa	Known RBP	18.47	■□□□□ 0.55

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